FFCP PHASE1:Hg19::chr12:88974236..88974256,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4254 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6343 | |||
|TSSclassifier=strong | |||
|UniProt=P21583 | |||
|association_with_transcript=0bp_to_ENST00000228280,ENST00000357116,ENST00000552044,NM_000899,NM_003994,uc001tav.2,uc001taw.2_5end | |||
|cluster_id=chr12:88974236..88974256,- | |||
|description=CAGE_peak_1_at_KITLG_5end | |||
|id=chr12:88974236..88974256,- | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-11!180;CL:0000057!1.10e-10!75;CL:0002620!3.46e-10!23;CL:0000220!1.52e-08!246;CL:0002321!2.99e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.14e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.30e-10,76;CL:0002620,3.23e-10,23;CL:0002321,1.82e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.84e-25!659;UBERON:0000481!2.54e-24!347;UBERON:0000467!9.90e-22!625;UBERON:0000480!1.96e-21!626;UBERON:0000475!6.06e-21!365;UBERON:0000477!9.38e-15!286;UBERON:0000922!9.51e-15!612;UBERON:0002050!2.05e-14!605;UBERON:0005423!2.05e-14!605;UBERON:0000923!2.44e-14!604;UBERON:0005291!2.44e-14!604;UBERON:0006598!2.44e-14!604;UBERON:0002532!2.44e-14!604;UBERON:0000062!4.07e-14!511;UBERON:0000119!1.84e-13!312;UBERON:0000483!3.76e-13!309;UBERON:0003102!4.13e-13!95;UBERON:0003104!1.87e-11!238;UBERON:0009142!1.87e-11!238;UBERON:0004111!1.53e-10!241;UBERON:0002100!6.44e-09!216;UBERON:0005256!7.28e-09!143;UBERON:0000064!1.25e-08!219;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0002097!8.02e-08!40;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0002199!1.46e-07!45;UBERON:0002416!1.46e-07!45;UBERON:0000914!5.78e-07!83;UBERON:0002329!5.78e-07!83;UBERON:0003077!5.78e-07!83;UBERON:0003059!5.78e-07!83;UBERON:0007282!5.78e-07!83;UBERON:0009618!5.78e-07!83;UBERON:0007285!5.78e-07!83;UBERON:0000033!7.80e-07!123;UBERON:0004121!9.65e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,6.04e-14,581;UBERON:0000119,2.24e-13,309;UBERON:0000922,2.37e-13,592;UBERON:0003102,2.97e-13,99;UBERON:0000483,4.59e-13,306;UBERON:0011216,4.78e-12,223;UBERON:0002050,1.40e-11,564;UBERON:0000923,2.16e-11,560;UBERON:0010316,2.16e-11,560;UBERON:0005291,2.16e-11,560;UBERON:0006598,2.16e-11,560;UBERON:0010317,2.16e-11,560;UBERON:0002532,2.16e-11,560;UBERON:0004111,3.88e-10,240;UBERON:0003104,8.00e-10,160;UBERON:0009142,8.00e-10,160;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0004119,6.76e-09,160;UBERON:0000925,6.76e-09,160;UBERON:0006595,6.76e-09,160;UBERON:0002097,4.23e-08,41;UBERON:0002199,7.80e-08,46;UBERON:0002416,7.80e-08,46;UBERON:0002100,2.30e-07,199;UBERON:0010314,4.77e-07,132;UBERON:0004921,7.44e-07,118 | |||
|phase1_expression=30.340289338183,20.7677508174254,13.3906683891173,16.0117277365009,4.91657203870017,10.4680622892044,2.53299878168311,27.1639545573537,7.83556884599516,4.42321085702716,9.76921635161399,3.05817920982241,5.01157258634062,44.5558870656168,58.6573355038411,28.2376561509746,28.9293373451509,25.5608531635581,25.3725055371064,10.2190478203734,6.32402142857184,8.46327747990837,36.9244423399063,43.5260671731772,24.7319000001762,0.305653622991805,0.164201178899891,0.314843125254717,0,0.767658796194425,0,15.6301608161418,7.228942050678,17.7481924880058,0,0,0,1.10799081706375,1.60435557976113,0.868043482863407,52.8440519206221,23.9681312854045,35.8030039011519,1.16318591023652,1.88937971844405,0.242584061187816,4.64858073811369,5.75635043230556,0.929119112685311,3.45230870786581,2.0492856522328,0.709446689665756,7.58440497620561,5.16387746867061,0,1.88242339542605,3.547779950752,0.898893937780338,5.20342617030534,1.28371610830437,2.55734850319616,1.64925650093358,0.997318288108159,0.852449501065388,5.80418477257168,5.10646702222026,2.4912889959823,3.51748131359441,1.0429658368404,0.65156653411535,19.9781835869012,9.94349617166425,3.16462387440884,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,17.0664806419773,18.1089232119982,14.5763320501625,79.5166135246046,53.1418185274043,25.0584477802225,9.54343136461319,5.83961844363163,63.5273971342536,52.1064084037025,45.4984189890393,29.6667606002319,8.37879163072847,8.89882662682631,3.57002133020152,3.65672448328461,5.31831842075461,0.238490624305342,0,0,16.6960422188032,16.3444573070164,2.42998351125316,9.04492707078415,8.80948816040802,37.4160537038492,22.9894463190492,63.5705227556549,98.5472547642187,81.6718295145795,15.7103433672567,9.12326526862215,10.2506064170231,13.2358708924513,16.2028389576352,8.48347418698758,8.30758678716828,11.5989824897822,22.9974956198825,16.1375162126582,18.6865778809015,0,0,4.79703457356788,7.45457927542978,28.7451261478596,37.7366165317674,38.436107180341,33.6934963088439,33.6406560085384,7.47242970107935,7.64669400093196,39.5238014957703,42.0297296857427,32.8558425258052,13.0167387774641,32.2658517708799,18.7457145467037,32.152487913523,22.2484010402335,28.2458006242904,71.2827406767653,67.5010178015109,55.3376178406859,38.5851383671748,12.2834317311768,69.4349249501144,64.1521542932309,104.346644155551,9.10161361938026,7.90479955997862,21.5470225861205,29.5279706897835,36.295399128428,23.7047915275652,27.8903894177108,96.1523577002219,17.0148274740032,99.5612478073184,84.7822833609713,166.366542410256,125.43807816328,139.9453347058,58.4844025903578,70.7244054060041,97.0463910387281,84.4778834747592,99.9637746006693,162.744220799585,59.4857489093228,73.4869856509392,65.7911201426491,118.522854025031,22.804780673269,11.7280831854059,15.4874481510062,5.00092195131341,6.36142887943129,21.960655202339,19.4882783428896,19.4287055174234,7.66452454059243,43.8058690523485,39.8809381679589,26.2456350569713,73.8345005570847,58.4722380152364,51.9366852174915,64.736520989991,66.0370221880741,48.5293480022533,51.4195488058078,59.0803841586631,46.1123073907762,57.1004463514757,46.5544059905132,8.11971000087113,19.6338483324824,3.2925920906512,0,1.26755034821831,1.96565443335525,7.68026878685825,0,79.9424850530238,36.3723757832874,26.0108176418443,25.8524032492525,14.1745851100399,42.7758616632407,8.47101593806844,29.1181739878282,36.0828355063183,33.0401654178969,20.1942954085613,21.7993336119221,31.0200293426329,18.8351610712252,16.5942923571448,13.735778593518,15.511671383506,5.14809383306323,12.039124145387,15.9347517777521,26.3731941272209,17.1547867663288,33.047094877351,68.589609489295,23.3863434290779,64.5388841643686,1.84901711427775,2.07328115540772,0.864719720501769,1.00993946741104,2.85740524314761,3.05590740446622,4.68869788840188,10.2643467613623,18.0976387157849,0.600686115687835,2.00078502841405,25.6780183150876,9.59112151433216,89.1793555582752,13.3149867230511,28.6125156681506,62.552403689144,21.5409874433745,22.8816361205005,32.9225439055542,18.4403871630262,30.3721284078353,26.4509288267573,8.13932408087165,2.46972101034231,61.5641388315159,23.1004766682655,0.791951872933429,29.5410589518394,14.816068796205,14.8959756861265,3.64871341923571,8.03611346291402,4.21667878966063,97.048066474091,28.7154839585285,19.9691667057006,45.1717676802847,36.7802617365186,29.5450589345828,0,0,0,0.256686072559497,176.087574586167,93.7006947774876,51.0370616433279,39.7013548842407,47.8454063739872,0,0,0,58.4011500583106,66.0225087798774,55.8805948821455,98.5781883656026,50.6738328183939,55.8266549220129,65.1306267359485,27.6870411749501,18.1926003244788,33.1113828136016,65.7583342550082,41.8518012589666,161.516639296166,8.02784745597236,5.14715135716284,0,0.215714200818617,0.426910231213777,5.45629628603267,1.6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| |||
|short_description=p1@KITLG | |||
}} |
Latest revision as of 06:00, 25 September 2015
Short description: | p1@KITLG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KITLG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000228280, ENST00000357116, ENST00000552044, NM_000899, NM_003994, uc001tav.2, uc001taw.2_5end |
EntrezGene: | KITLG |
HGNC: | 6343 |
UniProt: | P21583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.30e-10 | 76 |
skin fibroblast | 3.23e-10 | 23 |
embryonic cell | 1.82e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 6.04e-14 | 581 |
cell layer | 2.24e-13 | 309 |
embryo | 2.37e-13 | 592 |
surface structure | 2.97e-13 | 99 |
epithelium | 4.59e-13 | 306 |
organ system subdivision | 4.78e-12 | 223 |
embryonic structure | 1.40e-11 | 564 |
germ layer | 2.16e-11 | 560 |
germ layer / neural crest | 2.16e-11 | 560 |
embryonic tissue | 2.16e-11 | 560 |
presumptive structure | 2.16e-11 | 560 |
germ layer / neural crest derived structure | 2.16e-11 | 560 |
epiblast (generic) | 2.16e-11 | 560 |
anatomical conduit | 3.88e-10 | 240 |
mesenchyme | 8.00e-10 | 160 |
entire embryonic mesenchyme | 8.00e-10 | 160 |
digestive system | 1.82e-09 | 145 |
digestive tract | 1.82e-09 | 145 |
primitive gut | 1.82e-09 | 145 |
endoderm-derived structure | 6.76e-09 | 160 |
endoderm | 6.76e-09 | 160 |
presumptive endoderm | 6.76e-09 | 160 |
skin of body | 4.23e-08 | 41 |
integument | 7.80e-08 | 46 |
integumental system | 7.80e-08 | 46 |
trunk | 2.30e-07 | 199 |
structure with developmental contribution from neural crest | 4.77e-07 | 132 |
subdivision of digestive tract | 7.44e-07 | 118 |