FFCP PHASE1:Hg19::chr1:104104405..104104433,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:104104405..104104433,+
|short_description=p1@AMY2B
|description=CAGE_peak_1_at_AMY2B_5end
|association_with_transcript=26bp_to_ENST00000435302_5end
|Entre...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=280 | |EntrezGene=280 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=478 | |HGNC=478 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Z5 | |UniProt=C9J2Z5 | ||
|association_with_transcript=26bp_to_ENST00000435302_5end | |||
|cluster_id=chr1:104104405..104104433,+ | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_1_at_AMY2B_5end | |||
|id=chr1:104104405..104104433,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.43e-36!63;CL:0000576!5.43e-36!63;CL:0000040!5.43e-36!63;CL:0000559!5.43e-36!63;CL:0002057!2.29e-35!42;CL:0002009!1.60e-34!65;CL:0000860!2.39e-32!45;CL:0000839!3.26e-31!70;CL:0000557!1.31e-30!71;CL:0000766!1.69e-29!76;CL:0002087!4.58e-22!119;CL:0000763!1.48e-19!112;CL:0000049!1.48e-19!112;CL:0000738!9.47e-18!140;CL:0002031!1.78e-16!124;CL:0000037!2.16e-14!172;CL:0000566!2.16e-14!172;CL:0002032!3.77e-13!165;CL:0000837!3.77e-13!165;CL:0000988!7.32e-13!182;CL:0002619!1.41e-07!3;CL:0002393!7.33e-07!9;CL:0002397!7.33e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002619;6.77e-30;3!CL:0000235;2.73e-25;6!CL:0000473;1.93e-10;39!CL:0000234;1.93e-10;39!CL:0000766;1.59e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,6.80e-30,3;CL:0000235,2.41e-25,6;CL:0002194,2.22e-14,59;CL:0000576,2.22e-14,59;CL:0000040,2.22e-14,59;CL:0000559,2.22e-14,59;CL:0002009,7.19e-14,61;CL:0000839,1.00e-12,66;CL:0000557,1.62e-12,67;CL:0000766,1.47e-11,72;CL:0000473,6.52e-09,48;CL:0000234,6.52e-09,48;CL:0000763,2.96e-07,108;CL:0000049,2.96e-07,108;CL:0002087,9.95e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.53e-11;1!UBERON:0006298;3.08e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.54e-26!80;UBERON:0002390!2.18e-25!102;UBERON:0003061!2.18e-25!102;UBERON:0001474!1.10e-24!86;UBERON:0002193!2.07e-24!112;UBERON:0002405!5.40e-21!115;UBERON:0004765!1.96e-20!101;UBERON:0001434!1.96e-20!101;UBERON:0007023!1.24e-16!115;UBERON:0003081!8.19e-11!216;UBERON:0002204!1.01e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.47e-21;2!UBERON:0001044;1.84e-15;6!UBERON:0003293;1.84e-15;6!UBERON:0003294;1.84e-15;6!UBERON:0010047;1.84e-15;6!UBERON:0003408;1.84e-15;6!UBERON:0000167;1.84e-15;6!UBERON:0001831;2.53e-11;1!UBERON:0001567;2.53e-11;1!UBERON:0001736;3.08e-11;1!UBERON:0001389;9.04e-11;1!UBERON:0000026;9.04e-11;1!UBERON:0008784;9.04e-11;1!UBERON:0006058;9.04e-11;1!UBERON:0003663;9.04e-11;1!UBERON:0004256;9.04e-11;1!UBERON:0004708;9.04e-11;1!UBERON:0002101;9.04e-11;1!UBERON:0004709;9.04e-11;1!UBERON:0002529;9.04e-11;1!UBERON:0010538;9.04e-11;1!UBERON:0003661;9.04e-11;1!UBERON:0010890;9.04e-11;1!UBERON:0002471;9.04e-11;1!UBERON:0001383;9.04e-11;1!UBERON:0010758;9.04e-11;1!UBERON:0010707;9.04e-11;1!UBERON:0000978;9.04e-11;1!UBERON:0002103;9.04e-11;1!UBERON:0001665;9.04e-11;1!UBERON:0003823;9.04e-11;1!UBERON:0000154;9.04e-11;1!UBERON:0010709;9.04e-11;1!UBERON:0001041;6.57e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.49e-21,2;UBERON:0001044,1.84e-15,6;UBERON:0003293,1.84e-15,6;UBERON:0003294,1.84e-15,6;UBERON:0010047,1.84e-15,6;UBERON:0000167,1.84e-15,6;UBERON:0001831,2.53e-11,1;UBERON:0001567,2.53e-11,1;UBERON:0008801,2.53e-11,1;UBERON:0001736,3.08e-11,1;UBERON:0006298,3.08e-11,1;UBERON:0002371,6.97e-11,76;UBERON:0005418,9.05e-11,1;UBERON:0001389,9.05e-11,1;UBERON:0000026,9.05e-11,1;UBERON:0008784,9.05e-11,1;UBERON:0006058,9.05e-11,1;UBERON:0003663,9.05e-11,1;UBERON:0004256,9.05e-11,1;UBERON:0004708,9.05e-11,1;UBERON:0002101,9.05e-11,1;UBERON:0004709,9.05e-11,1;UBERON:0002529,9.05e-11,1;UBERON:0010538,9.05e-11,1;UBERON:0003661,9.05e-11,1;UBERON:0010890,9.05e-11,1;UBERON:0002471,9.05e-11,1;UBERON:0001383,9.05e-11,1;UBERON:0004357,9.05e-11,1;UBERON:0004347,9.05e-11,1;UBERON:0005420,9.05e-11,1;UBERON:0005732,9.05e-11,1;UBERON:0010758,9.05e-11,1;UBERON:0010707,9.05e-11,1;UBERON:0000978,9.05e-11,1;UBERON:0002103,9.05e-11,1;UBERON:0001665,9.05e-11,1;UBERON:0003823,9.05e-11,1;UBERON:0000154,9.05e-11,1;UBERON:0010709,9.05e-11,1;UBERON:0005733,9.05e-11,1;UBERON:0005730,9.05e-11,1;UBERON:0001474,5.44e-10,82;UBERON:0003408,1.73e-09,10;UBERON:0004765,5.54e-09,90;UBERON:0002405,1.20e-08,93;UBERON:0002390,3.88e-08,98;UBERON:0003061,3.88e-08,98;UBERON:0001434,6.02e-08,100;UBERON:0002193,2.96e-07,108 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,3.58264758783879,3.88672399222775,5.40908692031792,0.436194716338694,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0.945928919554341,1.03423704220986,1.93645405075148,0,0.188242339542605,0,0.898893937780338,0.612167784741805,0.962787081228281,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,1.26584954976354,0.422510572623884,0.212604299965044,0.628975936525128,0.561643155732475,0.600707571366025,0.16072558669708,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.702012795417713,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0,0,1.08803560673895,1.0027595760908,0.612691153526923,0.983617892129413,0,0.886068179966986,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,91.5590470651494,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,35.708870782083,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.821302454849976,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,33.4872376885315,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.91910583710883,0,0,0,0,0.381882949668989,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,3.58264758783879,3.88672399222775,5.40908692031792,0.436194716338694,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0.945928919554341,1.03423704220986,1.93645405075148,0,0.188242339542605,0,0.898893937780338,0.612167784741805,0.962787081228281,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,1.26584954976354,0.422510572623884,0.212604299965044,0.628975936525128,0.561643155732475,0.600707571366025,0.16072558669708,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.702012795417713,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0,0,1.08803560673895,1.0027595760908,0.612691153526923,0.983617892129413,0,0.886068179966986,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,91.5590470651494,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,35.708870782083,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.821302454849976,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,33.4872376885315,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.91910583710883,0,0,0,0,0.381882949668989,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p1@AMY2B | |||
}} | }} |
Latest revision as of 06:40, 25 September 2015
Short description: | p1@AMY2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMY2B_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 26bp_to_ENST00000435302_5end |
EntrezGene: | AMY2B |
HGNC: | 478 |
UniProt: | C9J2Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 6.80e-30 | 3 |
macrophage | 2.41e-25 | 6 |
monopoietic cell | 2.22e-14 | 59 |
monocyte | 2.22e-14 | 59 |
monoblast | 2.22e-14 | 59 |
promonocyte | 2.22e-14 | 59 |
macrophage dendritic cell progenitor | 7.19e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.00e-12 | 66 |
granulocyte monocyte progenitor cell | 1.62e-12 | 67 |
myeloid leukocyte | 1.47e-11 | 72 |
defensive cell | 6.52e-09 | 48 |
phagocyte | 6.52e-09 | 48 |
myeloid cell | 2.96e-07 | 108 |
common myeloid progenitor | 2.96e-07 | 108 |
nongranular leukocyte | 9.95e-07 | 115 |