FFCP PHASE1:Hg19::chr6:142622924..142622935,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:142622924..142622935,+
|short_description=p11@GPR126
|description=CAGE_peak_11_at_GPR126_5end
|association_with_transcript=-55bp_to_ENST00000230173_5end
|...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57211 | |EntrezGene=57211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13841 | |HGNC=13841 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SQ4 | |UniProt=Q86SQ4 | ||
|association_with_transcript=-55bp_to_ENST00000230173_5end | |||
|cluster_id=chr6:142622924..142622935,+ | |||
|description=CAGE_peak_11_at_GPR126_5end | |||
|id=chr6:142622924..142622935,+ | |||
|ontology_enrichment_celltype=CL:0000213!1.07e-09!57;CL:0000215!1.07e-09!57;CL:0000066!3.81e-08!254;CL:0000077!6.22e-08!19;CL:0000076!5.89e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.24e-23;6!CL:0000115;2.80e-16;36!CL:0002188;3.65e-13;5!CL:0002078;6.05e-13;45!CL:0002139;1.56e-10;24!CL:1000746;1.13e-09;7!CL:1000612;1.13e-09;7!CL:0000213;1.85e-09;58!CL:0000215;1.85e-09;58!CL:0002262;5.93e-09;2!CL:1000398;5.93e-09;2!CL:0002593;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.57e-23,6;CL:0002138,1.57e-23,6;CL:0005022,1.57e-23,6;CL:0000115,1.94e-20,36;CL:0002078,2.82e-16,45;CL:0002188,2.85e-13,5;CL:0000213,1.56e-12,58;CL:0000215,1.56e-12,58;CL:0002139,1.52e-10,24;CL:1000746,9.52e-10,7;CL:1000612,9.52e-10,7;CL:0002262,4.70e-09,2;CL:1000398,4.70e-09,2;CL:0002593,8.09e-09,2;CL:0000222,1.92e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.24e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;6.62e-18;8!UBERON:0004536;6.62e-18;8!UBERON:0006558;6.62e-18;8!UBERON:0002465;1.85e-14;10!UBERON:0001851;9.18e-10;15!UBERON:0000353;9.18e-10;15!UBERON:0003513;1.13e-09;7!UBERON:0000074;1.13e-09;7!UBERON:0001229;1.13e-09;7!UBERON:0001281;5.93e-09;2!UBERON:0003497;5.93e-09;2!UBERON:0003909;5.93e-09;2!UBERON:0003835;5.93e-09;2!UBERON:0002456;5.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.88e-18,8;UBERON:0004536,7.88e-18,8;UBERON:0006558,7.88e-18,8;UBERON:0002465,2.13e-14,10;UBERON:0000353,7.44e-10,15;UBERON:0001851,7.90e-10,15;UBERON:0010532,9.52e-10,7;UBERON:0000074,9.52e-10,7;UBERON:0001229,9.52e-10,7;UBERON:0001230,9.52e-10,7;UBERON:0003220,9.52e-10,7;UBERON:0005749,9.52e-10,7;UBERON:0004199,9.52e-10,7;UBERON:0004209,9.52e-10,7;UBERON:0004198,9.52e-10,7;UBERON:0003513,1.18e-09,7;UBERON:0001281,4.70e-09,2;UBERON:0003497,4.70e-09,2;UBERON:0003909,4.70e-09,2;UBERON:0003835,4.70e-09,2;UBERON:0002456,8.09e-09,2;UBERON:0005103,1.22e-08,8;UBERON:0000083,1.22e-08,8;UBERON:0009201,1.22e-08,8;UBERON:0006553,1.22e-08,8;UBERON:0003074,1.22e-08,8;UBERON:0003060,1.22e-08,8;UBERON:0000058,6.78e-08,19;UBERON:0000055,7.29e-08,68;UBERON:0000080,8.90e-08,9;UBERON:0002120,8.90e-08,9;UBERON:0004875,8.90e-08,9;UBERON:0005721,8.90e-08,9;UBERON:0005754,8.90e-08,9;UBERON:0007297,8.90e-08,9;UBERON:0002049,8.13e-07,78;UBERON:0007798,8.13e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.659702600373432,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,1.29208379584664,1.06729878806013,2.67776490211736,0,0,0,0.367663080345869,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0,0,0.161646056818812,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0.70445216541493,0.144366447761074,0,0,0,0,0,0.468008530278475,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.710783897485092,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,1.33496573924465,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,3.57814845749386,0.226624183040251,0.146552233678082,0,0,0,0.171086837884329,0.704815022316672,0.427149650270779,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0.428883182749851,0.521988583930423,0.226705925512272,0.231522474323834,0.734210113519403,0,0.308801447160972,0.438568099157414,0.706756583783524,0.38582807654183,0.506827321959218,0,0,0.607719912354764,0.138258436151731,0,0.132864840313363,0,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.504143392443436,0.138314504928436,0.322951291263702,0,0,0,0,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0.606965604236632,0,0.443511850813194,0,0,0.0679697329768317,0.0657727735628491,0.236387681767936,0,0.39246546425257,0,0.840816489941367,0,0,0,0.142953088353313,0,0.116241425368125,0,0.801711364730253,0,0.3414369541879,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.848915739187391,0.218559560503957,0,0.490296643507811,0.235676547101626,0,0.297046400327086,0,0.339854229375634,0.657887425858975,0.515663103788617,0,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,0.151557396436479,0,0,0,0.852935927603924,0,0.0645889098360061,0.248298857183432,0.33639558774184,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.659702600373432,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,1.29208379584664,1.06729878806013,2.67776490211736,0,0,0,0.367663080345869,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0,0,0.161646056818812,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0.70445216541493,0.144366447761074,0,0,0,0,0,0.468008530278475,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.710783897485092,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,1.33496573924465,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,3.57814845749386,0.226624183040251,0.146552233678082,0,0,0,0.171086837884329,0.704815022316672,0.427149650270779,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0.428883182749851,0.521988583930423,0.226705925512272,0.231522474323834,0.734210113519403,0,0.308801447160972,0.438568099157414,0.706756583783524,0.38582807654183,0.506827321959218,0,0,0.607719912354764,0.138258436151731,0,0.132864840313363,0,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.504143392443436,0.138314504928436,0.322951291263702,0,0,0,0,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0.606965604236632,0,0.443511850813194,0,0,0.0679697329768317,0.0657727735628491,0.236387681767936,0,0.39246546425257,0,0.840816489941367,0,0,0,0.142953088353313,0,0.116241425368125,0,0.801711364730253,0,0.3414369541879,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.848915739187391,0.218559560503957,0,0.490296643507811,0.235676547101626,0,0.297046400327086,0,0.339854229375634,0.657887425858975,0.515663103788617,0,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,0.151557396436479,0,0,0,0.852935927603924,0,0.0645889098360061,0.248298857183432,0.33639558774184,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p11@GPR126 | |||
}} | }} |
Latest revision as of 07:25, 25 September 2015
Short description: | p11@GPR126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GPR126_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000230173_5end |
EntrezGene: | GPR126 |
HGNC: | 13841 |
UniProt: | Q86SQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.57e-23 | 6 |
endothelial cell of lymphatic vessel | 1.57e-23 | 6 |
vascular lymphangioblast | 1.57e-23 | 6 |
endothelial cell | 1.94e-20 | 36 |
meso-epithelial cell | 2.82e-16 | 45 |
glomerular endothelial cell | 2.85e-13 | 5 |
lining cell | 1.56e-12 | 58 |
barrier cell | 1.56e-12 | 58 |
endothelial cell of vascular tree | 1.52e-10 | 24 |
glomerular cell | 9.52e-10 | 7 |
kidney corpuscule cell | 9.52e-10 | 7 |
endothelial cell of sinusoid | 4.70e-09 | 2 |
endothelial cell of hepatic sinusoid | 4.70e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 8.09e-09 | 2 |
mesodermal cell | 1.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 7.88e-18 | 8 |
lymph vasculature | 7.88e-18 | 8 |
lymphatic part of lymphoid system | 7.88e-18 | 8 |
lymphoid system | 2.13e-14 | 10 |
parenchyma | 7.44e-10 | 15 |
cortex | 7.90e-10 | 15 |
primitive nephron | 9.52e-10 | 7 |
renal glomerulus | 9.52e-10 | 7 |
renal corpuscle | 9.52e-10 | 7 |
glomerular capsule | 9.52e-10 | 7 |
metanephric mesenchyme | 9.52e-10 | 7 |
glomerular tuft | 9.52e-10 | 7 |
S-shaped body | 9.52e-10 | 7 |
renal vesicle | 9.52e-10 | 7 |
comma-shaped body | 9.52e-10 | 7 |
trunk blood vessel | 1.18e-09 | 7 |
hepatic sinusoid | 4.70e-09 | 2 |
abdomen blood vessel | 4.70e-09 | 2 |
sinusoid | 4.70e-09 | 2 |
abdominal segment blood vessel | 4.70e-09 | 2 |
internal thoracic artery | 8.09e-09 | 2 |
mesonephric epithelium | 1.22e-08 | 8 |
mesonephric tubule | 1.22e-08 | 8 |
nephric duct | 1.22e-08 | 8 |
renal duct | 1.22e-08 | 8 |
mesonephric duct | 1.22e-08 | 8 |
pronephric duct | 1.22e-08 | 8 |
duct | 6.78e-08 | 19 |
vessel | 7.29e-08 | 68 |
mesonephros | 8.90e-08 | 9 |
pronephros | 8.90e-08 | 9 |
nephrogenic cord | 8.90e-08 | 9 |
pronephric mesoderm | 8.90e-08 | 9 |
rostral part of nephrogenic cord | 8.90e-08 | 9 |
presumptive pronephric mesoderm | 8.90e-08 | 9 |
vasculature | 8.13e-07 | 78 |
vascular system | 8.13e-07 | 78 |