FFCP PHASE1:Hg19::chr17:46692287..46692317,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46692287..46692317,- to FFCP PHASE1:Hg19::chr17:46692287..46692317,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt=P17481,Q8N8T3 | |UniProt=P17481,Q8N8T3 | ||
|association_with_transcript=0bp_to_NM_024016,uc002inw.2_5end | |||
|cluster_id=chr17:46692287..46692317,- | |||
|coexpression_cluster_id=C3646 | |||
|description=CAGE_peak_7_at_HOXB8_5end | |||
|id=chr17:46692287..46692317,- | |||
|ontology_enrichment_celltype=CL:1000507!7.93e-12!12;CL:1000494!7.93e-12!12;CL:1000497!1.86e-10!18;CL:0002518!1.86e-10!18;CL:1000449!4.09e-10!16;CL:0002681!1.33e-08!13;CL:0002584!1.33e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.85e-12;15!CL:0002681;1.35e-11;12!CL:0002584;1.35e-11;12!CL:1000497;1.02e-10;17!CL:0002518;1.02e-10;17!CL:1000507;7.72e-10;10!CL:1000494;7.72e-10;10!CL:0002554;7.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.03e-12,15;CL:0002681,2.29e-11,12;CL:0002584,2.29e-11,12;CL:1000497,1.38e-10,17;CL:0002518,1.38e-10,17;CL:1000507,1.04e-09,10;CL:1000494,1.04e-09,10;CL:0002554,3.53e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.73e-14;3!UBERON:0003057;2.73e-14;3!UBERON:0007297;1.34e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.10e-18!32;UBERON:0003886!3.27e-13!63;UBERON:0002113!3.60e-13!27;UBERON:0003918!3.60e-13!27;UBERON:0005095!3.60e-13!27;UBERON:0007687!3.60e-13!27;UBERON:0000080!1.00e-12!18;UBERON:0002120!1.00e-12!18;UBERON:0004875!1.00e-12!18;UBERON:0005721!1.00e-12!18;UBERON:0005754!1.00e-12!18;UBERON:0007297!1.00e-12!18;UBERON:0002417!2.64e-12!61;UBERON:0000916!2.64e-12!61;UBERON:0002553!5.87e-12!70;UBERON:0003887!7.87e-12!21;UBERON:0009773!7.93e-12!12;UBERON:0001231!7.93e-12!12;UBERON:0004810!7.93e-12!12;UBERON:0006555!2.21e-11!17;UBERON:0005103!2.21e-11!17;UBERON:0000083!2.21e-11!17;UBERON:0009201!2.21e-11!17;UBERON:0004819!2.21e-11!17;UBERON:0006553!2.21e-11!17;UBERON:0003074!2.21e-11!17;UBERON:0003060!2.21e-11!17;UBERON:0004876!4.44e-11!20;UBERON:0006554!6.63e-11!44;UBERON:0000058!6.67e-11!26;UBERON:0001008!1.59e-10!45;UBERON:0005177!3.09e-10!107;UBERON:0004211!4.09e-10!16;UBERON:0001285!4.09e-10!16;UBERON:0007684!4.09e-10!16;UBERON:0003220!4.09e-10!16;UBERON:0004208!4.09e-10!16;UBERON:0005174!4.54e-09!5;UBERON:0001137!4.54e-09!5;UBERON:0000464!7.67e-09!104;UBERON:0005172!9.75e-09!55;UBERON:0005173!9.75e-09!55;UBERON:0001225!1.33e-08!13;UBERON:0008987!1.33e-08!13;UBERON:0003586!3.35e-08!5;UBERON:0009569!1.03e-07!113;UBERON:0003064!1.08e-07!37;UBERON:0000466!1.82e-07!126;UBERON:0003688!9.14e-07!6;UBERON:0002358!9.14e-07!6;UBERON:0003684!9.14e-07!6;UBERON:0001178!9.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;4.58e-15;29!UBERON:0002240;2.73e-14;3!UBERON:0005174;2.73e-14;3!UBERON:0001137;2.73e-14;3!UBERON:0006947;1.31e-13;3!UBERON:0004054;1.31e-13;3!UBERON:0006555;2.85e-12;15!UBERON:0004819;2.85e-12;15!UBERON:0001285;2.85e-12;15!UBERON:0007684;2.85e-12;15!UBERON:0001225;1.35e-11;12!UBERON:0008987;1.35e-11;12!UBERON:0005904;2.56e-10;4!UBERON:0004211;7.72e-10;10!UBERON:0009773;7.72e-10;10!UBERON:0001231;7.72e-10;10!UBERON:0004810;7.72e-10;10!UBERON:0002113;1.79e-09;24!UBERON:0011143;1.79e-09;24!UBERON:0001851;3.73e-09;15!UBERON:0000353;3.73e-09;15!UBERON:0001473;4.41e-08;8!UBERON:0004536;4.41e-08;8!UBERON:0006558;4.41e-08;8!UBERON:0004457;2.17e-07;9!UBERON:0000042;2.17e-07;9!UBERON:0006554;2.46e-07;30!UBERON:0001008;2.46e-07;30!UBERON:0000058;3.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.53e-20,31;UBERON:0006555,8.75e-15,16;UBERON:0004819,8.75e-15,16;UBERON:0002240,2.74e-14,3;UBERON:0005174,2.74e-14,3;UBERON:0001137,2.74e-14,3;UBERON:0002113,1.19e-13,26;UBERON:0003918,1.19e-13,26;UBERON:0011143,1.19e-13,26;UBERON:0005095,1.19e-13,26;UBERON:0007687,1.19e-13,26;UBERON:0006947,1.52e-13,3;UBERON:0004054,1.52e-13,3;UBERON:0004211,4.03e-12,15;UBERON:0009773,4.03e-12,15;UBERON:0001231,4.03e-12,15;UBERON:0001285,4.03e-12,15;UBERON:0007684,4.03e-12,15;UBERON:0004208,4.03e-12,15;UBERON:0002417,1.16e-11,60;UBERON:0000916,1.16e-11,60;UBERON:0001225,2.29e-11,12;UBERON:0008987,2.29e-11,12;UBERON:0000080,3.57e-11,9;UBERON:0002120,3.57e-11,9;UBERON:0004875,3.57e-11,9;UBERON:0005721,3.57e-11,9;UBERON:0005754,3.57e-11,9;UBERON:0007297,3.57e-11,9;UBERON:0005904,2.86e-10,4;UBERON:0000058,6.92e-10,19;UBERON:0004810,1.04e-09,10;UBERON:0004876,4.32e-09,11;UBERON:0001851,5.63e-09,15;UBERON:0000353,5.63e-09,15;UBERON:0003887,2.61e-08,12;UBERON:0005172,2.79e-08,54;UBERON:0005173,2.79e-08,54;UBERON:0005103,3.30e-08,8;UBERON:0000083,3.30e-08,8;UBERON:0009201,3.30e-08,8;UBERON:0006553,3.30e-08,8;UBERON:0003074,3.30e-08,8;UBERON:0003060,3.30e-08,8;UBERON:0001473,4.33e-08,8;UBERON:0004536,4.33e-08,8;UBERON:0006558,4.33e-08,8;UBERON:0009569,1.21e-07,112;UBERON:0003103,1.71e-07,68;UBERON:0003886,6.65e-07,54;UBERON:0005177,7.86e-07,101;UBERON:0006554,9.83e-07,47 | |||
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| ||
|short_description=p7@HOXB8 | |||
}} | }} |
Latest revision as of 07:34, 25 September 2015
Short description: | p7@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXB8_5end |
Coexpression cluster: | C3646_spinal_alveolar_glioblastoma_somatostatinoma_Endothelial_rhabdomyosarcoma_nonsmall |
Association with transcript: | 0bp_to_NM_024016, uc002inw.2_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481Q8N8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.03e-12 | 15 |
kidney cortical cell | 2.29e-11 | 12 |
renal cortical epithelial cell | 2.29e-11 | 12 |
kidney cell | 1.38e-10 | 17 |
kidney epithelial cell | 1.38e-10 | 17 |
kidney tubule cell | 1.04e-09 | 10 |
nephron tubule epithelial cell | 1.04e-09 | 10 |
fibroblast of lymphatic vessel | 3.53e-09 | 2 |