Personal tools

FFCP PHASE1:Mm9::chr8:49640611..49640622,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:49640611..49640622,-
|DHSsupport=NA
|short_description=p5@Odz3
|DPIdataset=NA
|description=CAGE_peak_5_at_Odz3_5end
|association_with_transcript=-25bp_to_uc009lru.1_5end
|EntrezGene=23965
|EntrezGene=23965
|HGNC=
|HGNC=
|MCL_coexpression_id=2482
|TSSclassifier=NA
|UniProt=D3YW49
|UniProt=D3YW49
|association_with_transcript=-25bp_to_uc009lru.1_5end
|cluster_id=chr8:49640611..49640622,-
|description=CAGE_peak_5_at_Odz3_5end
|id=chr8:49640611..49640622,-
|ontology_enrichment_celltype=CL:0002319!4.03e-08!43;CL:0000540!5.77e-08!33;CL:0000047!5.77e-08!33;CL:0000031!5.77e-08!33;CL:0000404!5.77e-08!33;CL:0000221!6.88e-08!44;CL:0000133!6.88e-08!44;CL:0000117!1.46e-07!23;CL:0000337!1.46e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-08,23;CL:0000337,1.54e-08,23;CL:0000540,5.19e-08,33;CL:0000047,5.19e-08,33;CL:0000031,5.19e-08,33;CL:0000404,5.19e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.41e-17!73;UBERON:0005743!5.41e-17!73;UBERON:0000073!7.07e-17!75;UBERON:0001016!7.07e-17!75;UBERON:0002346!8.30e-15!71;UBERON:0003075!8.30e-15!71;UBERON:0007284!8.30e-15!71;UBERON:0002020!1.18e-14!34;UBERON:0001049!2.32e-14!52;UBERON:0005068!2.32e-14!52;UBERON:0006241!2.32e-14!52;UBERON:0007135!2.32e-14!52;UBERON:0004121!5.43e-14!102;UBERON:0000924!5.43e-14!102;UBERON:0006601!5.43e-14!102;UBERON:0002780!5.58e-14!39;UBERON:0001890!5.58e-14!39;UBERON:0006240!5.58e-14!39;UBERON:0003080!5.76e-14!40;UBERON:0003056!7.38e-14!49;UBERON:0000955!1.17e-12!50;UBERON:0006238!1.17e-12!50;UBERON:0002791!1.87e-12!29;UBERON:0003528!1.87e-12!29;UBERON:0001893!1.87e-12!29;UBERON:0002616!4.32e-12!49;UBERON:0000033!5.17e-12!63;UBERON:0000956!2.16e-11!21;UBERON:0001869!2.16e-11!21;UBERON:0000203!2.16e-11!21;UBERON:0002619!6.16e-09!17;UBERON:0002021!2.20e-08!10;UBERON:0000411!2.20e-08!10;UBERON:0001950!2.20e-08!10;UBERON:0000468!2.27e-08!333;UBERON:0000025!1.99e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.13e-16,34;UBERON:0001017,5.49e-15,73;UBERON:0002780,3.52e-14,39;UBERON:0001890,3.52e-14,39;UBERON:0006240,3.52e-14,39;UBERON:0001016,3.96e-14,75;UBERON:0003080,1.56e-13,40;UBERON:0003528,1.81e-13,29;UBERON:0002791,1.81e-13,29;UBERON:0001893,1.81e-13,29;UBERON:0000956,2.93e-13,21;UBERON:0001869,2.93e-13,21;UBERON:0000203,2.93e-13,21;UBERON:0000073,6.59e-13,54;UBERON:0001049,2.12e-12,52;UBERON:0005068,2.12e-12,52;UBERON:0006241,2.12e-12,52;UBERON:0007135,2.12e-12,52;UBERON:0003056,2.09e-11,49;UBERON:0002346,2.47e-11,64;UBERON:0003075,2.47e-11,64;UBERON:0007284,2.47e-11,64;UBERON:0000955,5.68e-11,47;UBERON:0006238,5.68e-11,47;UBERON:0002021,6.90e-11,10;UBERON:0000411,6.90e-11,10;UBERON:0001950,6.90e-11,10;UBERON:0002616,2.63e-10,46;UBERON:0002619,5.44e-10,17;UBERON:0004121,1.67e-09,95;UBERON:0000924,1.67e-09,95;UBERON:0006601,1.67e-09,95;UBERON:0010371,6.16e-09,73
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,1.31811709640683,0.777719596297134,1.53985063787899,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.90149421051854,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,2.7996195323289,3.78016627328734,3.15487442027073,1.42825492201902,1.32521124570968,1.10241719293459,1.24599112323707,0.919218786610021,0,1.27687338085188,1.0752457327937,4.08847491963601,1.82975287204819,2.08365348222704,1.3959149950069,0.56276261003168,0.61119299110724,1.76777151284201,2.70506193518296,3.35519002485541,0.605809546665472,0.755715601067855,0,0,0,1.07940638327563,1.94932925234301,0.896053774194671,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,1.25602267690966,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,1.15307748628029,0.452167921657868,0.705532242814229,1.0053327306374,0.494389935468748,0.289198713839823,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.38219787324151,2.78118912307642,2.81287003063364,1.0389402227978,1.94689515681309,2.74966282395854,0.248813941220186,0,0.210441855886474,1.69156575851515,0.459804208866946,1.26043490863744,0.60281927134286,0.816437989815934,1.2811372028485,0.937017245597288,0.776110112217047,1.07783996466421,1.51284864134255,2.11141348996739,0.876782929710299,1.66828349535359,1.0447564995665,2.26360350048738,2.58744546864041,0,0,0,0.414251545071004,0.938104239924385,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,0.324275238183423,0,0.219550115291051,0.268412837520744,1.47202963994889,1.9551876352064,0,0,1.2797295032114,1.39342003116263,1.80414445850931,1.4117846723634,1.55664630691409,0.570676878337677,0,0.658795818896044,0.502670417600539,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,1.02823661348756,1.1270773567308,1.01825663922657,1.93952487167626,1.40271639780637,0.505892296994058,0.295220295959204,0,0.123397163921801,0.889357881261447,0.333690211432188,0.786235980452812,0.224862112384854,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,1.29708181420028,2.47105271869273,4.31304619582064,1.11642284300551,3.43241440426017,3.28352541331245,1.25578189465339,0.964887042726734,0,1.70542270593436,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0,0.504941854408746,1.26203287766503,1.95219372148319,0.861693590931196,0.716906393857656,1.33679204449436,2.26461224631066,0,0.584511715822624,0.395287777946524,3.21321316421807,0.425820255624806,1.24645922567079,1.14020871547503,0.659880491890142,0,0.728341908464944,1.209294227859,1.32023555829129,0.885905678642318,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.720244376125241,1.03486947026204,1.92903331528433,1.41872186913819,1.42695054081656,1.64549020602121,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.484393280087717,0.542816324353403,0.596861720015682,0,0,0.370850604021019,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,1.89801596148681,1.01659733563424,1.40406943068342,1.25452977608681,1.09181281873089,0.404593039154462,0.991841468704031,0,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,1.68956125490778,1.5256441023948,0.651021924219751,0.943734099831398,0.241584120826006,0,0,1.21635129174099,0.924398614483445,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0,0.915758121336325,0,0,7.34177395402186,5.9842280745933,5.72895513439397,8.76451229952807,4.11049511862385,3.7769694869485,4.05013500139084,4.5032120322422,4.07828168085784,5.1776031175182,0.830298780673413,1.19707462020309,1.53660245178721,1.94485373654635,2.30574478890781,0.367687016900028,1.11123363900808,1.23621034343337,0,2.77966932940177,1.2673964994512,0.754505365544305,1.49826411951812,1.47257850531199,1.49332219284595,0.476293691283074,1.62238056322798,1.92909220463705,0.824171801606613,1.03039244094078,1.37147700954166,1.59728225543404,1.66905332963125,0.872078499793971,1.12931256498397,1.35383372626682,1.46342378298218,0.526139422875686,1.62964936615034,1.68342681497322,1.89816028998679,1.87158516513571,0.818462086339379,1.54936841185966,1.15743966588685,2.49810577937946,0.701794825336225,0.644613162144895,0.765153328275374,0.441182838239031,0.463735671240843
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,1.31811709640683,0.777719596297134,1.53985063787899,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.90149421051854,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,2.7996195323289,3.78016627328734,3.15487442027073,1.42825492201902,1.32521124570968,1.10241719293459,1.24599112323707,0.919218786610021,0,1.27687338085188,1.0752457327937,4.08847491963601,1.82975287204819,2.08365348222704,1.3959149950069,0.56276261003168,0.61119299110724,1.76777151284201,2.70506193518296,3.35519002485541,0.605809546665472,0.755715601067855,0,0,0,1.07940638327563,1.94932925234301,0.896053774194671,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,1.25602267690966,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,1.15307748628029,0.452167921657868,0.705532242814229,1.0053327306374,0.494389935468748,0.289198713839823,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.38219787324151,2.78118912307642,2.81287003063364,1.0389402227978,1.94689515681309,2.74966282395854,0.248813941220186,0,0.210441855886474,1.69156575851515,0.459804208866946,1.26043490863744,0.60281927134286,0.816437989815934,1.2811372028485,0.937017245597288,0.776110112217047,1.07783996466421,1.51284864134255,2.11141348996739,0.876782929710299,1.66828349535359,1.0447564995665,2.26360350048738,2.58744546864041,0,0,0,0.414251545071004,0.938104239924385,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,0.324275238183423,0,0.219550115291051,0.268412837520744,1.47202963994889,1.9551876352064,0,0,1.2797295032114,1.39342003116263,1.80414445850931,1.4117846723634,1.55664630691409,0.570676878337677,0,0.658795818896044,0.502670417600539,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,1.02823661348756,1.1270773567308,1.01825663922657,1.93952487167626,1.40271639780637,0.505892296994058,0.295220295959204,0,0.123397163921801,0.889357881261447,0.333690211432188,0.786235980452812,0.224862112384854,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,1.29708181420028,2.47105271869273,4.31304619582064,1.11642284300551,3.43241440426017,3.28352541331245,1.25578189465339,0.964887042726734,0,1.70542270593436,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0,0.504941854408746,1.26203287766503,1.95219372148319,0.861693590931196,0.716906393857656,1.33679204449436,2.26461224631066,0,0.584511715822624,0.395287777946524,3.21321316421807,0.425820255624806,1.24645922567079,1.14020871547503,0.659880491890142,0,0.728341908464944,1.209294227859,1.32023555829129,0.885905678642318,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.720244376125241,1.03486947026204,1.92903331528433,1.41872186913819,1.42695054081656,1.64549020602121,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.484393280087717,0.542816324353403,0.596861720015682,0,0,0.370850604021019,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,1.89801596148681,1.01659733563424,1.40406943068342,1.25452977608681,1.09181281873089,0.404593039154462,0.991841468704031,0,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,1.68956125490778,1.5256441023948,0.651021924219751,0.943734099831398,0.241584120826006,0,0,1.21635129174099,0.924398614483445,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0,0.915758121336325,0,0,7.34177395402186,5.9842280745933,5.72895513439397,8.76451229952807,4.11049511862385,3.7769694869485,4.05013500139084,4.5032120322422,4.07828168085784,5.1776031175182,0.830298780673413,1.19707462020309,1.53660245178721,1.94485373654635,2.30574478890781,0.367687016900028,1.11123363900808,1.23621034343337,0,2.77966932940177,1.2673964994512,0.754505365544305,1.49826411951812,1.47257850531199,1.49332219284595,0.476293691283074,1.62238056322798,1.92909220463705,0.824171801606613,1.03039244094078,1.37147700954166,1.59728225543404,1.66905332963125,0.872078499793971,1.12931256498397,1.35383372626682,1.46342378298218,0.526139422875686,1.62964936615034,1.68342681497322,1.89816028998679,1.87158516513571,0.818462086339379,1.54936841185966,1.15743966588685,2.49810577937946,0.701794825336225,0.644613162144895,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p5@Odz3
}}
}}

Latest revision as of 15:04, 25 September 2015

Short description:p5@Odz3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Odz3_5end
Coexpression cluster:MCL_coexpression_mm9:2482
Association with transcript: -25bp_to_uc009lru.1_5end
EntrezGene:Odz3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Odz3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.54e-0823
neuroblast (sensu Vertebrata)1.54e-0823
neuron5.19e-0833
neuronal stem cell5.19e-0833
neuroblast5.19e-0833
electrically signaling cell5.19e-0833

Uber anatomy
Ontology termp-valuen
gray matter2.13e-1634
central nervous system5.49e-1573
regional part of forebrain3.52e-1439
forebrain3.52e-1439
future forebrain3.52e-1439
nervous system3.96e-1475
anterior neural tube1.56e-1340
brain grey matter1.81e-1329
regional part of telencephalon1.81e-1329
telencephalon1.81e-1329
cerebral cortex2.93e-1321
cerebral hemisphere2.93e-1321
pallium2.93e-1321
regional part of nervous system6.59e-1354
neural tube2.12e-1252
neural rod2.12e-1252
future spinal cord2.12e-1252
neural keel2.12e-1252
pre-chordal neural plate2.09e-1149
neurectoderm2.47e-1164
neural plate2.47e-1164
presumptive neural plate2.47e-1164
brain5.68e-1147
future brain5.68e-1147
occipital lobe6.90e-1110
visual cortex6.90e-1110
neocortex6.90e-1110
regional part of brain2.63e-1046
regional part of cerebral cortex5.44e-1017
ectoderm-derived structure1.67e-0995
ectoderm1.67e-0995
presumptive ectoderm1.67e-0995
ecto-epithelium6.16e-0973
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:49640611..49640622,-&oldid=4198226"