FFCP PHASE1:Mm9::chr14:119324684..119324701,-: Difference between revisions
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{{FFCP|EntrezGene=66573|HGNC=|MCL_coexpression_id=87|UniProt=E9QLM3,Q8BMD2|association_with_transcript=-75bp_to_ENSMUST00000110728,uc007uza.1_5end|description=CAGE_peak_1_at_Dzip1_5end|id=chr14:119324684..119324701,-|ontology_enrichment_celltype=CL:0000393!2.81e-16!39;CL:0000211!2.81e-16!39;CL:0000540!6.51e-16!33;CL:0000047!6.51e-16!33;CL:0000031!6.51e-16!33;CL:0000404!6.51e-16!33;CL:0000117!7.99e-13!23;CL:0000337!7.99e-13!23;CL:0000055!8.32e-13!50;CL:0002319!1.05e-12!43;CL:0000221!1.29e-12!44;CL:0000133!1.29e-12!44|ontology_enrichment_celltype_v019_2=CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0000540,3.39e-16,33;CL:0000047,3.39e-16,33;CL:0000031,3.39e-16,33;CL:0000404,3.39e-16,33;CL:0000117,4.79e-13,23;CL:0000337,4.79e-13,23;CL:0002319,8.02e-13,43;CL:0000221,9.88e-13,44;CL:0000133,9.88e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.85e-24!73;UBERON:0005743!4.85e-24!73;UBERON:0000153!1.15e-22!94;UBERON:0000073!1.23e-22!75;UBERON:0001016!1.23e-22!75;UBERON:0007811!9.20e-21!86;UBERON:0004121!1.01e-18!102;UBERON:0000924!1.01e-18!102;UBERON:0006601!1.01e-18!102;UBERON:0002346!9.11e-17!71;UBERON:0003075!9.11e-17!71;UBERON:0007284!9.11e-17!71;UBERON:0000033!2.70e-16!63;UBERON:0001049!3.64e-16!52;UBERON:0005068!3.64e-16!52;UBERON:0006241!3.64e-16!52;UBERON:0007135!3.64e-16!52;UBERON:0000955!2.32e-14!50;UBERON:0006238!2.32e-14!50;UBERON:0002616!5.95e-14!49;UBERON:0003056!2.77e-13!49;UBERON:0003080!2.30e-11!40;UBERON:0002780!8.96e-11!39;UBERON:0001890!8.96e-11!39;UBERON:0006240!8.96e-11!39;UBERON:0002020!1.02e-10!34;UBERON:0002791!1.07e-07!29;UBERON:0003528!1.07e-07!29;UBERON:0001893!1.07e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.75e-24,73;UBERON:0001016,6.12e-23,75;UBERON:0004121,7.29e-21,95;UBERON:0000924,7.29e-21,95;UBERON:0006601,7.29e-21,95;UBERON:0002346,1.59e-19,64;UBERON:0003075,1.59e-19,64;UBERON:0007284,1.59e-19,64;UBERON:0000073,1.39e-17,54;UBERON:0010371,1.33e-16,73;UBERON:0001049,1.88e-16,52;UBERON:0005068,1.88e-16,52;UBERON:0006241,1.88e-16,52;UBERON:0007135,1.88e-16,52;UBERON:0003056,1.63e-13,49;UBERON:0000955,5.99e-13,47;UBERON:0006238,5.99e-13,47;UBERON:0002616,1.52e-12,46;UBERON:0010314,7.56e-12,92;UBERON:0003080,1.47e-11,40;UBERON:0002780,5.90e-11,39;UBERON:0001890,5.90e-11,39;UBERON:0006240,5.90e-11,39;UBERON:0002020,6.76e-11,34;UBERON:0000153,4.79e-08,43;UBERON:0003528,8.10e-08,29;UBERON:0002791,8.10e-08,29;UBERON:0001893,8.10e-08,29|phase1_expression=12.3314612270691,0,0.454999239389536,0,0,0,0.233612640595526,4.9066862907799,1.97104211012333,1.87251621057595,0.171217968225505,0.239316476986009,9.0736386863539,10.1407666806037,0,0.607425802169478,0,1.26184866143295,1.23402990245165,0.42438965179803,3.91199134694921,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,12.4637849795822,13.8886395770735,11.0128051297009,4.69434806608824,2.18025156380447,5.05278220289285,4.27745777963423,4.4795654920116,7.18762821824858,0.335565212115473,14.5072428402269,8.06625117941913,3.8588915405392,3.15186783932632,6.70373719960675,32.5729501983952,34.3844136526821,24.0855933332348,4.74382344896785,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,3.89480143673926,8.4528027170742,8.29516898467821,7.1553147315796,7.57169860864975,49.7032712862618,46.6032621407905,8.57435594504678,11.6931474642248,10.1114066527102,23.1243350098716,16.4716666129892,21.8121277223866,23.2119866405141,28.818607734759,26.045668527838,19.821992929098,27.5753678915523,22.7669389187447,73.6571463684169,62.3587961900071,41.7534758648673,0.530083353332288,1.36028808192214,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,1.40444420131752,11.0779709675738,4.93593408745451,5.65343319216544,5.21120653173718,24.3820307087204,22.9324715735981,28.4426681261332,0.649473123033642,0,0,1.48439043634778,2.84831672011889,2.22663208597237,5.03107447621794,2.74018930480927,1.15307748628029,2.41156224884196,3.29248379979973,2.51333182659351,0,1.87979163995885,0.884610551949874,3.558870698843,0.441683036920787,0.969750506270444,0,8.49064311333487,8.58731497935166,0.255457055208591,0.239630249011841,0,0,28.4602214869163,6.8625090422794,21.8638572676384,11.1247564923057,10.4843337505436,16.4152555202052,14.1149898868949,5.09196819251581,2.48813941220186,1.0108910337347,2.52530227063769,12.1012011955314,9.88579049063934,9.54329287968351,8.43946979880004,9.32100038373192,10.3772113430728,11.2442069471675,6.72628763921441,7.97601573851516,12.1027891307404,16.0115522989193,12.4941567483718,10.2877482213471,5.92028683087683,5.14455341019859,6.96619933864726,0,0,0,2.89976081549703,5.15957331958412,4.14142741360334,4.49814997611899,3.54175617145327,1.85120535464854,2.55787339225449,2.14618721119695,1.28441876603886,0.987359099480883,1.64167464079095,1.86458261955468,0.877199924551994,0.439100230582101,0.268412837520744,15.3511662451813,14.6124549578584,0.991256348951394,0,8.53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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66573 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=E9QLM3,Q8BMD2 | |||
|association_with_transcript=-75bp_to_ENSMUST00000110728,uc007uza.1_5end | |||
|cluster_id=chr14:119324684..119324701,- | |||
|description=CAGE_peak_1_at_Dzip1_5end | |||
|id=chr14:119324684..119324701,- | |||
|ontology_enrichment_celltype=CL:0000393!2.81e-16!39;CL:0000211!2.81e-16!39;CL:0000540!6.51e-16!33;CL:0000047!6.51e-16!33;CL:0000031!6.51e-16!33;CL:0000404!6.51e-16!33;CL:0000117!7.99e-13!23;CL:0000337!7.99e-13!23;CL:0000055!8.32e-13!50;CL:0002319!1.05e-12!43;CL:0000221!1.29e-12!44;CL:0000133!1.29e-12!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0000540,3.39e-16,33;CL:0000047,3.39e-16,33;CL:0000031,3.39e-16,33;CL:0000404,3.39e-16,33;CL:0000117,4.79e-13,23;CL:0000337,4.79e-13,23;CL:0002319,8.02e-13,43;CL:0000221,9.88e-13,44;CL:0000133,9.88e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.85e-24!73;UBERON:0005743!4.85e-24!73;UBERON:0000153!1.15e-22!94;UBERON:0000073!1.23e-22!75;UBERON:0001016!1.23e-22!75;UBERON:0007811!9.20e-21!86;UBERON:0004121!1.01e-18!102;UBERON:0000924!1.01e-18!102;UBERON:0006601!1.01e-18!102;UBERON:0002346!9.11e-17!71;UBERON:0003075!9.11e-17!71;UBERON:0007284!9.11e-17!71;UBERON:0000033!2.70e-16!63;UBERON:0001049!3.64e-16!52;UBERON:0005068!3.64e-16!52;UBERON:0006241!3.64e-16!52;UBERON:0007135!3.64e-16!52;UBERON:0000955!2.32e-14!50;UBERON:0006238!2.32e-14!50;UBERON:0002616!5.95e-14!49;UBERON:0003056!2.77e-13!49;UBERON:0003080!2.30e-11!40;UBERON:0002780!8.96e-11!39;UBERON:0001890!8.96e-11!39;UBERON:0006240!8.96e-11!39;UBERON:0002020!1.02e-10!34;UBERON:0002791!1.07e-07!29;UBERON:0003528!1.07e-07!29;UBERON:0001893!1.07e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.75e-24,73;UBERON:0001016,6.12e-23,75;UBERON:0004121,7.29e-21,95;UBERON:0000924,7.29e-21,95;UBERON:0006601,7.29e-21,95;UBERON:0002346,1.59e-19,64;UBERON:0003075,1.59e-19,64;UBERON:0007284,1.59e-19,64;UBERON:0000073,1.39e-17,54;UBERON:0010371,1.33e-16,73;UBERON:0001049,1.88e-16,52;UBERON:0005068,1.88e-16,52;UBERON:0006241,1.88e-16,52;UBERON:0007135,1.88e-16,52;UBERON:0003056,1.63e-13,49;UBERON:0000955,5.99e-13,47;UBERON:0006238,5.99e-13,47;UBERON:0002616,1.52e-12,46;UBERON:0010314,7.56e-12,92;UBERON:0003080,1.47e-11,40;UBERON:0002780,5.90e-11,39;UBERON:0001890,5.90e-11,39;UBERON:0006240,5.90e-11,39;UBERON:0002020,6.76e-11,34;UBERON:0000153,4.79e-08,43;UBERON:0003528,8.10e-08,29;UBERON:0002791,8.10e-08,29;UBERON:0001893,8.10e-08,29 | |||
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| |||
|short_description=p1@Dzip1 | |||
}} |
Latest revision as of 16:22, 25 September 2015
Short description: | p1@Dzip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dzip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -75bp_to_ENSMUST00000110728, uc007uza.1_5end |
EntrezGene: | Dzip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.44e-16 | 39 |
electrically active cell | 1.44e-16 | 39 |
neuron | 3.39e-16 | 33 |
neuronal stem cell | 3.39e-16 | 33 |
neuroblast | 3.39e-16 | 33 |
electrically signaling cell | 3.39e-16 | 33 |
CNS neuron (sensu Vertebrata) | 4.79e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-13 | 23 |
neural cell | 8.02e-13 | 43 |
ectodermal cell | 9.88e-13 | 44 |
neurectodermal cell | 9.88e-13 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.75e-24 | 73 |
nervous system | 6.12e-23 | 75 |
ectoderm-derived structure | 7.29e-21 | 95 |
ectoderm | 7.29e-21 | 95 |
presumptive ectoderm | 7.29e-21 | 95 |
neurectoderm | 1.59e-19 | 64 |
neural plate | 1.59e-19 | 64 |
presumptive neural plate | 1.59e-19 | 64 |
regional part of nervous system | 1.39e-17 | 54 |
ecto-epithelium | 1.33e-16 | 73 |
neural tube | 1.88e-16 | 52 |
neural rod | 1.88e-16 | 52 |
future spinal cord | 1.88e-16 | 52 |
neural keel | 1.88e-16 | 52 |
pre-chordal neural plate | 1.63e-13 | 49 |
brain | 5.99e-13 | 47 |
future brain | 5.99e-13 | 47 |
regional part of brain | 1.52e-12 | 46 |
structure with developmental contribution from neural crest | 7.56e-12 | 92 |
anterior neural tube | 1.47e-11 | 40 |
regional part of forebrain | 5.90e-11 | 39 |
forebrain | 5.90e-11 | 39 |
future forebrain | 5.90e-11 | 39 |
gray matter | 6.76e-11 | 34 |
anterior region of body | 4.79e-08 | 43 |
brain grey matter | 8.10e-08 | 29 |
regional part of telencephalon | 8.10e-08 | 29 |
telencephalon | 8.10e-08 | 29 |