FFCP PHASE1:Mm9::chr2:129024493..129024505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20515 | |EntrezGene=20515 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q61609 | |UniProt=Q61609 | ||
|association_with_transcript=0bp_to_ENSMUST00000028880_5end | |association_with_transcript=0bp_to_ENSMUST00000028880_5end | ||
|cluster_id=chr2:129024493..129024505,+ | |||
|description=CAGE_peak_2_at_Slc20a1_5end | |description=CAGE_peak_2_at_Slc20a1_5end | ||
|id=chr2:129024493..129024505,+ | |id=chr2:129024493..129024505,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.00e-11!33;CL:0000047!2.00e-11!33;CL:0000031!2.00e-11!33;CL:0000404!2.00e-11!33;CL:0000117!6.12e-11!23;CL:0000337!6.12e-11!23;CL:0002319!1.31e-08!43;CL:0000393!1.79e-08!39;CL:0000211!1.79e-08!39;CL:0000221!3.24e-08!44;CL:0000133!3.24e-08!44 | |ontology_enrichment_celltype=CL:0000540!2.00e-11!33;CL:0000047!2.00e-11!33;CL:0000031!2.00e-11!33;CL:0000404!2.00e-11!33;CL:0000117!6.12e-11!23;CL:0000337!6.12e-11!23;CL:0002319!1.31e-08!43;CL:0000393!1.79e-08!39;CL:0000211!1.79e-08!39;CL:0000221!3.24e-08!44;CL:0000133!3.24e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-11,33;CL:0000047,1.84e-11,33;CL:0000031,1.84e-11,33;CL:0000404,1.84e-11,33;CL:0000117,5.64e-11,23;CL:0000337,5.64e-11,23;CL:0002319,1.30e-08,43;CL:0000393,1.53e-08,39;CL:0000211,1.53e-08,39;CL:0000221,3.20e-08,44;CL:0000133,3.20e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-18!75;UBERON:0001016!1.41e-18!75;UBERON:0001017!1.10e-17!73;UBERON:0005743!1.10e-17!73;UBERON:0002020!1.76e-15!34;UBERON:0001049!1.35e-14!52;UBERON:0005068!1.35e-14!52;UBERON:0006241!1.35e-14!52;UBERON:0007135!1.35e-14!52;UBERON:0000033!1.01e-13!63;UBERON:0004121!1.06e-13!102;UBERON:0000924!1.06e-13!102;UBERON:0006601!1.06e-13!102;UBERON:0002346!1.36e-13!71;UBERON:0003075!1.36e-13!71;UBERON:0007284!1.36e-13!71;UBERON:0000955!1.57e-13!50;UBERON:0006238!1.57e-13!50;UBERON:0002616!4.50e-13!49;UBERON:0007811!8.62e-13!86;UBERON:0000153!9.74e-13!94;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0003056!1.44e-12!49;UBERON:0003080!1.02e-10!40;UBERON:0002780!3.13e-10!39;UBERON:0001890!3.13e-10!39;UBERON:0006240!3.13e-10!39;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0002619!1.54e-07!17;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!1.41e-18!75;UBERON:0001016!1.41e-18!75;UBERON:0001017!1.10e-17!73;UBERON:0005743!1.10e-17!73;UBERON:0002020!1.76e-15!34;UBERON:0001049!1.35e-14!52;UBERON:0005068!1.35e-14!52;UBERON:0006241!1.35e-14!52;UBERON:0007135!1.35e-14!52;UBERON:0000033!1.01e-13!63;UBERON:0004121!1.06e-13!102;UBERON:0000924!1.06e-13!102;UBERON:0006601!1.06e-13!102;UBERON:0002346!1.36e-13!71;UBERON:0003075!1.36e-13!71;UBERON:0007284!1.36e-13!71;UBERON:0000955!1.57e-13!50;UBERON:0006238!1.57e-13!50;UBERON:0002616!4.50e-13!49;UBERON:0007811!8.62e-13!86;UBERON:0000153!9.74e-13!94;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0003056!1.44e-12!49;UBERON:0003080!1.02e-10!40;UBERON:0002780!3.13e-10!39;UBERON:0001890!3.13e-10!39;UBERON:0006240!3.13e-10!39;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0002619!1.54e-07!17;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.29e-18,75;UBERON:0002346,7.26e-18,64;UBERON:0003075,7.26e-18,64;UBERON:0007284,7.26e-18,64;UBERON:0001017,1.02e-17,73;UBERON:0004121,6.61e-17,95;UBERON:0000924,6.61e-17,95;UBERON:0006601,6.61e-17,95;UBERON:0000073,9.18e-16,54;UBERON:0002020,1.56e-15,34;UBERON:0001049,1.28e-14,52;UBERON:0005068,1.28e-14,52;UBERON:0006241,1.28e-14,52;UBERON:0007135,1.28e-14,52;UBERON:0010371,6.84e-14,73;UBERON:0003528,9.30e-13,29;UBERON:0002791,9.30e-13,29;UBERON:0001893,9.30e-13,29;UBERON:0003056,1.31e-12,49;UBERON:0000955,6.52e-12,47;UBERON:0006238,6.52e-12,47;UBERON:0002616,1.81e-11,46;UBERON:0003080,9.44e-11,40;UBERON:0002780,2.91e-10,39;UBERON:0001890,2.91e-10,39;UBERON:0006240,2.91e-10,39;UBERON:0000956,1.58e-08,21;UBERON:0001869,1.58e-08,21;UBERON:0000203,1.58e-08,21;UBERON:0010314,1.17e-07,92;UBERON:0002619,1.46e-07,17;UBERON:0002021,3.04e-07,10;UBERON:0000411,3.04e-07,10;UBERON:0001950,3.04e-07,10 | |||
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| ||
|short_description=p2@Slc20a1 | |short_description=p2@Slc20a1 | ||
}} | }} |
Latest revision as of 17:03, 25 September 2015
Short description: | p2@Slc20a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc20a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000028880_5end |
EntrezGene: | Slc20a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.84e-11 | 33 |
neuronal stem cell | 1.84e-11 | 33 |
neuroblast | 1.84e-11 | 33 |
electrically signaling cell | 1.84e-11 | 33 |
CNS neuron (sensu Vertebrata) | 5.64e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.64e-11 | 23 |
neural cell | 1.30e-08 | 43 |
electrically responsive cell | 1.53e-08 | 39 |
electrically active cell | 1.53e-08 | 39 |
ectodermal cell | 3.20e-08 | 44 |
neurectodermal cell | 3.20e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.29e-18 | 75 |
neurectoderm | 7.26e-18 | 64 |
neural plate | 7.26e-18 | 64 |
presumptive neural plate | 7.26e-18 | 64 |
central nervous system | 1.02e-17 | 73 |
ectoderm-derived structure | 6.61e-17 | 95 |
ectoderm | 6.61e-17 | 95 |
presumptive ectoderm | 6.61e-17 | 95 |
regional part of nervous system | 9.18e-16 | 54 |
gray matter | 1.56e-15 | 34 |
neural tube | 1.28e-14 | 52 |
neural rod | 1.28e-14 | 52 |
future spinal cord | 1.28e-14 | 52 |
neural keel | 1.28e-14 | 52 |
ecto-epithelium | 6.84e-14 | 73 |
brain grey matter | 9.30e-13 | 29 |
regional part of telencephalon | 9.30e-13 | 29 |
telencephalon | 9.30e-13 | 29 |
pre-chordal neural plate | 1.31e-12 | 49 |
brain | 6.52e-12 | 47 |
future brain | 6.52e-12 | 47 |
regional part of brain | 1.81e-11 | 46 |
anterior neural tube | 9.44e-11 | 40 |
regional part of forebrain | 2.91e-10 | 39 |
forebrain | 2.91e-10 | 39 |
future forebrain | 2.91e-10 | 39 |
cerebral cortex | 1.58e-08 | 21 |
cerebral hemisphere | 1.58e-08 | 21 |
pallium | 1.58e-08 | 21 |
structure with developmental contribution from neural crest | 1.17e-07 | 92 |
regional part of cerebral cortex | 1.46e-07 | 17 |
occipital lobe | 3.04e-07 | 10 |
visual cortex | 3.04e-07 | 10 |
neocortex | 3.04e-07 | 10 |