Personal tools

FFCP PHASE1:Mm9::chr10:126758922..126758940,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216445
|EntrezGene=216445
|HGNC=
|HGNC=
|MCL_coexpression_id=285
|TSSclassifier=NA
|UniProt=Q1HDU4
|UniProt=Q1HDU4
|association_with_transcript=-231bp_to_ENSMUST00000069535,uc007hja.1_5end
|association_with_transcript=-231bp_to_ENSMUST00000069535,uc007hja.1_5end
|cluster_id=chr10:126758922..126758940,+
|description=CAGE_peak_1_at_Arhgap9_5end
|description=CAGE_peak_1_at_Arhgap9_5end
|id=chr10:126758922..126758940,+
|id=chr10:126758922..126758940,+
|ontology_enrichment_celltype=CL:0000838!5.78e-09!12;CL:0000084!2.30e-08!11;CL:0000827!2.30e-08!11;CL:0000542!8.52e-08!13;CL:0000051!8.52e-08!13;CL:0000791!4.12e-07!9;CL:0000789!4.12e-07!9;CL:0002420!4.12e-07!9;CL:0002419!4.12e-07!9;CL:0000790!4.12e-07!9;CL:0002031!6.98e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000838,6.06e-13,12;CL:0000084,5.05e-12,11;CL:0000827,5.05e-12,11;CL:0000542,1.22e-11,13;CL:0000051,1.22e-11,13;CL:0000791,4.19e-10,9;CL:0000789,4.19e-10,9;CL:0002420,4.19e-10,9;CL:0002419,4.19e-10,9;CL:0000790,4.19e-10,9;CL:0002031,6.04e-10,25;CL:0000624,6.09e-09,8;CL:0000738,5.24e-08,17;CL:0002087,5.24e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.97e-13!130;UBERON:0000925!3.97e-13!130;UBERON:0006595!3.97e-13!130;UBERON:0004177!5.83e-13!29;UBERON:0001007!1.87e-12!128;UBERON:0001555!1.87e-12!128;UBERON:0007026!1.87e-12!128;UBERON:0004921!1.58e-11!126;UBERON:0004185!1.58e-11!126;UBERON:0002193!1.90e-11!48;UBERON:0003408!1.20e-10!24;UBERON:0002370!3.36e-10!23;UBERON:0000974!3.36e-10!23;UBERON:0004807!3.36e-10!23;UBERON:0005058!3.36e-10!23;UBERON:0003351!3.36e-10!23;UBERON:0009113!3.36e-10!23;UBERON:0003295!3.36e-10!23;UBERON:0009722!3.36e-10!23;UBERON:0005562!3.36e-10!23;UBERON:0007690!3.36e-10!23;UBERON:0006562!4.88e-10!24;UBERON:0001557!4.88e-10!24;UBERON:0001042!4.88e-10!24;UBERON:0008814!4.88e-10!24;UBERON:0009145!4.88e-10!24;UBERON:0000077!8.50e-10!97;UBERON:0002390!9.01e-10!45;UBERON:0003061!9.01e-10!45;UBERON:0002405!9.28e-10!70;UBERON:0005057!1.52e-09!51;UBERON:0001041!9.41e-09!92;UBERON:0001004!9.94e-09!42;UBERON:0000065!2.50e-08!41;UBERON:0007023!4.66e-08!51;UBERON:0000072!8.24e-08!27
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.07e-19,29;UBERON:0005057,2.07e-19,29;UBERON:0002193,3.22e-18,48;UBERON:0002405,3.22e-18,48;UBERON:0000077,3.14e-17,35;UBERON:0003408,7.29e-17,24;UBERON:0002370,3.60e-16,23;UBERON:0000974,3.60e-16,23;UBERON:0004807,3.60e-16,23;UBERON:0005058,3.60e-16,23;UBERON:0003351,3.60e-16,23;UBERON:0009113,3.60e-16,23;UBERON:0003295,3.60e-16,23;UBERON:0009722,3.60e-16,23;UBERON:0005562,3.60e-16,23;UBERON:0007690,3.60e-16,23;UBERON:0002390,1.49e-15,45;UBERON:0003061,1.49e-15,45;UBERON:0006562,3.33e-15,24;UBERON:0001557,3.33e-15,24;UBERON:0001042,3.33e-15,24;UBERON:0008814,3.33e-15,24;UBERON:0009145,3.33e-15,24;UBERON:0001004,1.64e-13,42;UBERON:0000065,6.99e-13,41;UBERON:0000072,9.45e-13,27;UBERON:0004119,4.67e-11,118;UBERON:0000925,4.67e-11,118;UBERON:0006595,4.67e-11,118;UBERON:0001007,8.99e-11,116;UBERON:0001555,8.99e-11,116;UBERON:0007026,8.99e-11,116;UBERON:0004921,1.12e-09,114;UBERON:0007811,6.38e-09,36;UBERON:0001041,7.00e-09,80;UBERON:0007023,1.68e-07,51
|phase1_expression=0,0,0,0,0,0,0.233612640595526,120.213814124108,9.85521055061667,11.0010327371337,2.56826952338257,1.91453181588807,136.104580295309,188.128706005682,1.66554880907831,6.2767332890846,0.699561878128147,17.5081501773822,14.9454732630255,14.429248161133,3.23164502574065,16.482297899347,8.097193463307,11.6794468639187,6.8822784320151,0,0,0,3.42042155021473,3.02436155711917,2.88249663851896,0,0,0,0,0,0,18.8339233831608,12.5013655123808,16.2292360631877,15.8822501768374,16.3930916390027,9.22469670759192,0,0,0,0,0,0,0,0,0,10.7380867876951,64.5572306390096,88.7287629736105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,5.59501010623394,232.52621951516,2.3750742250372,0,0,0,0.301445281105245,0,0,0.247194967734374,3.32578520915797,7.07688441559899,0,0.883366073841574,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,4.08731288333746,0.239630249011841,0,0,0,0,0,0,0,0,0,0,2.36373244159177,1.0108910337347,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.486412857275134,0,0.439100230582101,0.268412837520744,0.210289948564127,0,13.2167513193519,2.90895623329899,0,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.994782360205754,0.974820435595601,1.79763881730844,2.80979464837102,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.493588655687202,0.592905254174298,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0.575392274901621,0.486405680325106,0.549122826376163,4.31304619582064,1.86070473834252,1.24815069245824,1.01031551178845,0.179397413521912,0.482443521363367,8.86815312799702,0,0.162964976442026,0,0,0.502518772325447,0.238043640886014,0,2.52216230569906,1.55025282754142,1.91345722388985,6.39066927391378,5.52591941970866,4.19482269886384,0,0.54390568381871,2.45882136509518,4.13905119457099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,2.47455184458803,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.03371317267288,0.363533729477506,0,3.79244109522979,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,4.4587624532105,0.63549621259146,0.220528398054962,3.46261131177108,0,0.180938774784468,0,0.492422699235184,1.45740418314925,0.18542530201051,12.3027034174454,0.412773735926445,3.51869602002452,4.70921142511728,8.61173634642459,10.2950177942935,0.339956859987711,0.559805809294632,1.24379976423981,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,1.16653475962614,3.72803587852155,0,0,0,0.194451188344048,0,0,0.352071715937262,0.2604087696879,0.314578033277133,0,0,10.7443781013581,3.44632865993279,5.44368072973584,8.18501184760109,8.23522800070415,11.1261558677508,9.37524506255757,12.4059202826645,12.8227391434147,9.98309167180498,13.1074040677893,14.4237663494834,16.4522249204963,25.9466722843083,0.226730383615211,0.221985953374065,1.07656627931371,0.335769232728157,1.73870634628971,1.68914227906064,3.11357761254351,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0.382576664137687,0.661774257358546,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0.233612640595526,120.213814124108,9.85521055061667,11.0010327371337,2.56826952338257,1.91453181588807,136.104580295309,188.128706005682,1.66554880907831,6.2767332890846,0.699561878128147,17.5081501773822,14.9454732630255,14.429248161133,3.23164502574065,16.482297899347,8.097193463307,11.6794468639187,6.8822784320151,0,0,0,3.42042155021473,3.02436155711917,2.88249663851896,0,0,0,0,0,0,18.8339233831608,12.5013655123808,16.2292360631877,15.8822501768374,16.3930916390027,9.22469670759192,0,0,0,0,0,0,0,0,0,10.7380867876951,64.5572306390096,88.7287629736105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,5.59501010623394,232.52621951516,2.3750742250372,0,0,0,0.301445281105245,0,0,0.247194967734374,3.32578520915797,7.07688441559899,0,0.883366073841574,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,4.08731288333746,0.239630249011841,0,0,0,0,0,0,0,0,0,0,2.36373244159177,1.0108910337347,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.486412857275134,0,0.439100230582101,0.268412837520744,0.210289948564127,0,13.2167513193519,2.90895623329899,0,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.994782360205754,0.974820435595601,1.79763881730844,2.80979464837102,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.493588655687202,0.592905254174298,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0.575392274901621,0.486405680325106,0.549122826376163,4.31304619582064,1.86070473834252,1.24815069245824,1.01031551178845,0.179397413521912,0.482443521363367,8.86815312799702,0,0.162964976442026,0,0,0.502518772325447,0.238043640886014,0,2.52216230569906,1.55025282754142,1.91345722388985,6.39066927391378,5.52591941970866,4.19482269886384,0,0.54390568381871,2.45882136509518,4.13905119457099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,2.47455184458803,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.03371317267288,0.363533729477506,0,3.79244109522979,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,4.4587624532105,0.63549621259146,0.220528398054962,3.46261131177108,0,0.180938774784468,0,0.492422699235184,1.45740418314925,0.18542530201051,12.3027034174454,0.412773735926445,3.51869602002452,4.70921142511728,8.61173634642459,10.2950177942935,0.339956859987711,0.559805809294632,1.24379976423981,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,1.16653475962614,3.72803587852155,0,0,0,0.194451188344048,0,0,0.352071715937262,0.2604087696879,0.314578033277133,0,0,10.7443781013581,3.44632865993279,5.44368072973584,8.18501184760109,8.23522800070415,11.1261558677508,9.37524506255757,12.4059202826645,12.8227391434147,9.98309167180498,13.1074040677893,14.4237663494834,16.4522249204963,25.9466722843083,0.226730383615211,0.221985953374065,1.07656627931371,0.335769232728157,1.73870634628971,1.68914227906064,3.11357761254351,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0.382576664137687,0.661774257358546,1.15933917810211
|short_description=p1@Arhgap9
|short_description=p1@Arhgap9
}}
}}

Latest revision as of 17:41, 25 September 2015

Short description:p1@Arhgap9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgap9_5end
Coexpression cluster:MCL_coexpression_mm9:285
Association with transcript: -231bp_to_ENSMUST00000069535, uc007hja.1_5end
EntrezGene:Arhgap9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgap9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9120.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4136.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8188.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I964.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A188.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H9232.53
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I25.44
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F89.38
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C412.82
thymus, neonate N07.CNhs11211.713-19D39.98
thymus, neonate N10.CNhs11194.748-24E413.11
thymus, neonate N20.CNhs11186.820-7A214.42
thymus, neonate N25.CNhs11125.1362-25G716.45
thymus, neonate N30.CNhs11132.1393-42G225.95
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ2.07e-1929
immune organ2.07e-1929
hemolymphoid system3.22e-1848
immune system3.22e-1848
mixed endoderm/mesoderm-derived structure3.14e-1735
gland of gut7.29e-1724
thymus3.60e-1623
neck3.60e-1623
respiratory system epithelium3.60e-1623
hemolymphoid system gland3.60e-1623
pharyngeal epithelium3.60e-1623
thymic region3.60e-1623
pharyngeal gland3.60e-1623
entire pharyngeal arch endoderm3.60e-1623
thymus primordium3.60e-1623
early pharyngeal endoderm3.60e-1623
hematopoietic system1.49e-1545
blood island1.49e-1545
pharynx3.33e-1524
upper respiratory tract3.33e-1524
chordate pharynx3.33e-1524
pharyngeal arch system3.33e-1524
pharyngeal region of foregut3.33e-1524
respiratory system1.64e-1342
respiratory tract6.99e-1341
segment of respiratory tract9.45e-1327
endoderm-derived structure4.67e-11118
endoderm4.67e-11118
presumptive endoderm4.67e-11118
digestive system8.99e-11116
digestive tract8.99e-11116
primitive gut8.99e-11116
subdivision of digestive tract1.12e-09114
craniocervical region6.38e-0936
foregut7.00e-0980
adult organism1.68e-0751
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:126758922..126758940,%2B&oldid=4205155"