FFCP PHASE1:Mm9::chr2:130249978..130250029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319513 | |EntrezGene=319513 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1392 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P1Z5,Q8BFT7,Q8BUE8,Q8BUZ8 | |UniProt=Q6P1Z5,Q8BFT7,Q8BUE8,Q8BUZ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000089581,ENSMUST00000123977,ENSMUST00000131561,ENSMUST00000153663,NM_178762,uc008miv.2,uc008miw.2,uc008mix.2,uc008miy.2_5end | |association_with_transcript=0bp_to_ENSMUST00000089581,ENSMUST00000123977,ENSMUST00000131561,ENSMUST00000153663,NM_178762,uc008miv.2,uc008miw.2,uc008mix.2,uc008miy.2_5end | ||
|cluster_id=chr2:130249978..130250029,- | |||
|description=CAGE_peak_1_at_Fam113a_5end | |description=CAGE_peak_1_at_Fam113a_5end | ||
|id=chr2:130249978..130250029,- | |id=chr2:130249978..130250029,- | ||
|ontology_enrichment_celltype=CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23 | |ontology_enrichment_celltype=CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.14e-09,23;CL:0000337,9.14e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.57e-21!73;UBERON:0005743!2.57e-21!73;UBERON:0000033!1.71e-20!63;UBERON:0000073!1.06e-19!75;UBERON:0001016!1.06e-19!75;UBERON:0001049!2.45e-19!52;UBERON:0005068!2.45e-19!52;UBERON:0006241!2.45e-19!52;UBERON:0007135!2.45e-19!52;UBERON:0002346!5.65e-19!71;UBERON:0003075!5.65e-19!71;UBERON:0007284!5.65e-19!71;UBERON:0004121!6.48e-19!102;UBERON:0000924!6.48e-19!102;UBERON:0006601!6.48e-19!102;UBERON:0000955!6.52e-19!50;UBERON:0006238!6.52e-19!50;UBERON:0003056!1.64e-18!49;UBERON:0002616!2.99e-18!49;UBERON:0003080!1.07e-16!40;UBERON:0002780!4.20e-16!39;UBERON:0001890!4.20e-16!39;UBERON:0006240!4.20e-16!39;UBERON:0002020!1.97e-13!34;UBERON:0000153!2.02e-12!94;UBERON:0002791!2.53e-12!29;UBERON:0003528!2.53e-12!29;UBERON:0001893!2.53e-12!29;UBERON:0007811!8.29e-11!86;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0000468!4.37e-08!333;UBERON:0002619!1.16e-07!17;UBERON:0000025!1.79e-07!114;UBERON:0004111!3.54e-07!122;UBERON:0000479!8.73e-07!349 | |ontology_enrichment_uberon=UBERON:0001017!2.57e-21!73;UBERON:0005743!2.57e-21!73;UBERON:0000033!1.71e-20!63;UBERON:0000073!1.06e-19!75;UBERON:0001016!1.06e-19!75;UBERON:0001049!2.45e-19!52;UBERON:0005068!2.45e-19!52;UBERON:0006241!2.45e-19!52;UBERON:0007135!2.45e-19!52;UBERON:0002346!5.65e-19!71;UBERON:0003075!5.65e-19!71;UBERON:0007284!5.65e-19!71;UBERON:0004121!6.48e-19!102;UBERON:0000924!6.48e-19!102;UBERON:0006601!6.48e-19!102;UBERON:0000955!6.52e-19!50;UBERON:0006238!6.52e-19!50;UBERON:0003056!1.64e-18!49;UBERON:0002616!2.99e-18!49;UBERON:0003080!1.07e-16!40;UBERON:0002780!4.20e-16!39;UBERON:0001890!4.20e-16!39;UBERON:0006240!4.20e-16!39;UBERON:0002020!1.97e-13!34;UBERON:0000153!2.02e-12!94;UBERON:0002791!2.53e-12!29;UBERON:0003528!2.53e-12!29;UBERON:0001893!2.53e-12!29;UBERON:0007811!8.29e-11!86;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0000468!4.37e-08!333;UBERON:0002619!1.16e-07!17;UBERON:0000025!1.79e-07!114;UBERON:0004111!3.54e-07!122;UBERON:0000479!8.73e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.57e-21,73;UBERON:0002346,4.64e-20,64;UBERON:0003075,4.64e-20,64;UBERON:0007284,4.64e-20,64;UBERON:0001016,1.06e-19,75;UBERON:0000073,1.51e-19,54;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0001049,2.45e-19,52;UBERON:0005068,2.45e-19,52;UBERON:0006241,2.45e-19,52;UBERON:0007135,2.45e-19,52;UBERON:0003056,1.64e-18,49;UBERON:0000955,3.18e-18,47;UBERON:0006238,3.18e-18,47;UBERON:0002616,1.45e-17,46;UBERON:0010371,1.81e-17,73;UBERON:0003080,1.07e-16,40;UBERON:0002780,4.20e-16,39;UBERON:0001890,4.20e-16,39;UBERON:0006240,4.20e-16,39;UBERON:0002020,1.97e-13,34;UBERON:0003528,2.53e-12,29;UBERON:0002791,2.53e-12,29;UBERON:0001893,2.53e-12,29;UBERON:0010314,4.21e-11,92;UBERON:0000956,1.35e-09,21;UBERON:0001869,1.35e-09,21;UBERON:0000203,1.35e-09,21;UBERON:0002619,1.16e-07,17;UBERON:0000025,1.79e-07,114;UBERON:0004111,3.54e-07,122;UBERON:0000479,8.62e-07,349 | |||
|phase1_expression=13.2923543096979,5.93258192986914,3.18499467572675,7.25914107136392,7.51343594919521,5.03637815735669,5.37309073369709,13.1705789910408,10.559154161375,9.36258105287974,14.3823093309424,12.2849124852818,10.6144452557348,13.2879011676876,2.99798785634096,2.63217847606774,2.09868563438444,7.09789872056035,8.22686601634433,6.79023442876848,11.9060606211498,9.13476751048145,6.26879493933445,4.31979541542198,3.89995777814189,5.16808767703518,4.73838195774982,4.09395342103189,4.18051522804023,2.26827116783938,1.77384408524244,13.3356441426523,12.916360539276,0,4.62162591602039,5.15327400611326,3.26670970019791,2.92972141515835,0,2.09409497589519,0.588231488031014,3.41522742479223,1.45653105909346,15.6112054289716,14.0913934395125,15.2343804294196,22.6893489860931,12.209408757305,11.643367684927,11.4713640453827,12.4587915246573,14.3752564364972,6.20795642413625,1.45072428402269,5.71359458542189,7.20326420900652,10.3152038377952,11.3447860301037,24.4802917640113,37.0293685490423,30.4239073682966,9.4876468979357,13.3394219416671,12.1486461832989,17.7995945262055,13.4991221839759,23.668408730954,28.432154593795,20.7379224616955,21.8709620097339,22.7150958259493,13.9968982357864,17.8903518170807,18.0061474845982,18.3064849644831,22.0612508786405,19.82085857989,15.0671058940522,16.2822925251618,23.6076455037047,23.3293491186145,17.1901412283731,12.5632349550621,15.757353080887,22.1557459276375,18.2669722993674,15.8032565687004,22.5543329448614,4.46784540665786,7.02815508993105,9.56552812715537,18.9293252935905,6.11974200336975,19.9690180905992,20.1430689408777,22.4013443548668,9.97155382935438,11.4188316127299,9.09251016110041,11.3068663843309,14.7885590765515,17.9657068380045,5.09610479413291,7.11066703153331,4.11332977921307,4.81383744402687,2.52762222507392,8.44960709921044,5.95557132388495,16.7739617143252,12.3174582003956,13.3964810457342,11.0695438682908,9.79697163592047,15.1689432205059,10.9329934456818,9.88779870937496,16.33972733195,7.07688441559899,13.1031148457401,6.62524555381181,5.33362778448744,5.59175283654366,14.0534782565543,16.3368431314495,5.36459815938042,2.63593273913025,1.79970819298022,4.3203877204842,23.666921025962,23.7900313465686,23.8743269014442,23.6401075461496,24.2929684463814,19.7398642331582,16.2241263067758,19.7568365869614,7.83763914843586,12.8888606801174,14.9413717679397,15.7445735984871,17.4725599369439,17.2859644613135,20.3451504078215,20.8191687403063,14.9893052733274,14.0552586839593,16.815719098036,11.2095356325078,17.9650776159428,20.4103304030181,19.070028721199,28.9169139194622,18.4573648256748,20.1666493679785,23.4860434845822,2.80885274925294,2.31613116403244,5.11494298912067,7.87077935634907,8.67746421930056,8.28285482720668,10.4167683657493,10.4285042826124,10.0273623376796,8.60375595576509,6.17028823219124,5.48797109125697,5.26591519723137,5.25335885053105,9.1607754786817,7.01759939641595,10.0993053033883,8.18659154438268,24.6039239820029,23.3593470100976,5.61711931072457,6.87571473325215,15.5700422890721,13.9342003116263,13.1444810548535,10.0841762311671,8.2279876222602,11.4135375667535,6.64340686162316,7.24675400785648,8.04272668160862,7.36138946552258,10.3330966173134,3.59527763461689,4.53889904736858,6.17337947088538,15.5527678781527,13.3670759753383,13.5249282807697,13.4409876377907,14.3524840504043,10.5905088034381,10.0546094027569,9.00421902675573,10.9899109488962,9.87177311374404,14.2297261001831,8.17541018008861,8.64859578498093,4.72210436008193,4.46292267054706,5.30589751455317,6.11102044275408,9.49397253587675,7.45822043165163,10.9824565275233,8.62609239164127,11.1642284300551,14.3537329632698,15.912469310668,13.6342034276653,17.3679667690812,9.23765950833023,11.9379589415405,12.548303186036,13.5796068620151,13.6120344007331,12.2279567932526,13.3304438896168,12.0982861671835,10.4039195110086,10.1873757238436,11.6401981119966,11.6342953448174,10.0157289482219,8.53429445630918,1.50791283939272,2.71952841909355,5.90117127622843,12.6930903300177,20.5504755184374,15.2375192569864,16.8852993737976,8.33154059774431,9.4652465824877,9.37052986311932,12.9254038639679,10.9925647058174,11.8083297263669,11.6061377623421,12.5491317519217,15.7818163272108,13.0444966722353,26.3483479465882,16.3231097989509,25.6414469280848,19.220661203722,18.1467135269789,22.5666735177937,13.595715624679,11.7906187216253,13.7681708221806,19.7852268230118,14.1420168054207,11.8877014857382,11.9966130727577,17.1118741624666,13.5895805912401,18.9753495434998,13.4076206222643,29.6182457005796,13.8647042404109,19.4038025674132,16.5039516974326,22.8768901398533,21.0475204770443,20.8977256164694,24.9661258273971,4.69343416127421,10.591603543191,7.93902232997863,10.5527201882547,15.0161916827192,9.71038091343309,8.59480876822583,10.669158483429,6.70405924248657,21.1384844291981,7.17657699350981,11.5576646059405,11.1116716421827,2.0720530270516,4.37421528707281,6.17701067657611,2.54967644990783,3.49878630809145,3.45499934511059,6.68269432610579,16.449471666219,15.2489600345137,11.77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|phase1_expression=13.2923543096979,5.93258192986914,3.18499467572675,7.25914107136392,7.51343594919521,5.03637815735669,5.37309073369709,13.1705789910408,10.559154161375,9.36258105287974,14.3823093309424,12.2849124852818,10.6144452557348,13.2879011676876,2.99798785634096,2.63217847606774,2.09868563438444,7.09789872056035,8.22686601634433,6.79023442876848,11.9060606211498,9.13476751048145,6.26879493933445,4.31979541542198,3.89995777814189,5.16808767703518,4.73838195774982,4.09395342103189,4.18051522804023,2.26827116783938,1.77384408524244,13.3356441426523,12.916360539276,0,4.62162591602039,5.15327400611326,3.26670970019791,2.92972141515835,0,2.09409497589519,0.588231488031014,3.41522742479223,1.45653105909346,15.6112054289716,14.0913934395125,15.2343804294196,22.6893489860931,12.209408757305,11.643367684927,11.4713640453827,12.4587915246573,14.3752564364972,6.20795642413625,1.45072428402269,5.71359458542189,7.20326420900652,10.3152038377952,11.3447860301037,24.4802917640113,37.0293685490423,30.4239073682966,9.4876468979357,13.3394219416671,12.1486461832989,17.7995945262055,13.4991221839759,23.668408730954,28.432154593795,20.7379224616955,21.8709620097339,22.7150958259493,13.9968982357864,17.8903518170807,18.0061474845982,18.3064849644831,22.0612508786405,19.82085857989,15.0671058940522,16.2822925251618,23.6076455037047,23.3293491186145,17.1901412283731,12.5632349550621,15.757353080887,22.1557459276375,18.2669722993674,15.8032565687004,22.5543329448614,4.46784540665786,7.02815508993105,9.56552812715537,18.9293252935905,6.11974200336975,19.9690180905992,20.1430689408777,22.4013443548668,9.97155382935438,11.4188316127299,9.09251016110041,11.3068663843309,14.7885590765515,17.9657068380045,5.09610479413291,7.11066703153331,4.11332977921307,4.81383744402687,2.52762222507392,8.44960709921044,5.95557132388495,16.7739617143252,12.3174582003956,13.3964810457342,11.0695438682908,9.79697163592047,15.1689432205059,10.9329934456818,9.88779870937496,16.33972733195,7.07688441559899,13.1031148457401,6.62524555381181,5.33362778448744,5.59175283654366,14.0534782565543,16.3368431314495,5.36459815938042,2.63593273913025,1.79970819298022,4.3203877204842,23.666921025962,23.7900313465686,23.8743269014442,23.6401075461496,24.2929684463814,19.7398642331582,16.2241263067758,19.7568365869614,7.83763914843586,12.8888606801174,14.9413717679397,15.7445735984871,17.4725599369439,17.2859644613135,20.3451504078215,20.8191687403063,14.9893052733274,14.0552586839593,16.815719098036,11.2095356325078,17.9650776159428,20.4103304030181,19.070028721199,28.9169139194622,18.4573648256748,20.1666493679785,23.4860434845822,2.80885274925294,2.31613116403244,5.11494298912067,7.87077935634907,8.67746421930056,8.28285482720668,10.4167683657493,10.4285042826124,10.0273623376796,8.60375595576509,6.17028823219124,5.48797109125697,5.26591519723137,5.25335885053105,9.1607754786817,7.01759939641595,10.0993053033883,8.18659154438268,24.6039239820029,23.3593470100976,5.61711931072457,6.87571473325215,15.5700422890721,13.9342003116263,13.1444810548535,10.0841762311671,8.2279876222602,11.4135375667535,6.64340686162316,7.24675400785648,8.04272668160862,7.36138946552258,10.3330966173134,3.59527763461689,4.53889904736858,6.17337947088538,15.5527678781527,13.3670759753383,13.5249282807697,13.4409876377907,14.3524840504043,10.5905088034381,10.0546094027569,9.00421902675573,10.9899109488962,9.87177311374404,14.2297261001831,8.17541018008861,8.64859578498093,4.72210436008193,4.46292267054706,5.30589751455317,6.11102044275408,9.49397253587675,7.45822043165163,10.9824565275233,8.62609239164127,11.1642284300551,14.3537329632698,15.912469310668,13.6342034276653,17.3679667690812,9.23765950833023,11.9379589415405,12.548303186036,13.5796068620151,13.6120344007331,12.2279567932526,13.3304438896168,12.0982861671835,10.4039195110086,10.1873757238436,11.6401981119966,11.6342953448174,10.0157289482219,8.53429445630918,1.50791283939272,2.71952841909355,5.90117127622843,12.6930903300177,20.5504755184374,15.2375192569864,16.8852993737976,8.33154059774431,9.4652465824877,9.37052986311932,12.9254038639679,10.9925647058174,11.8083297263669,11.6061377623421,12.5491317519217,15.7818163272108,13.0444966722353,26.3483479465882,16.3231097989509,25.6414469280848,19.220661203722,18.1467135269789,22.5666735177937,13.595715624679,11.7906187216253,13.7681708221806,19.7852268230118,14.1420168054207,11.8877014857382,11.9966130727577,17.1118741624666,13.5895805912401,18.9753495434998,13.4076206222643,29.6182457005796,13.8647042404109,19.4038025674132,16.5039516974326,22.8768901398533,21.0475204770443,20.8977256164694,24.9661258273971,4.69343416127421,10.591603543191,7.93902232997863,10.5527201882547,15.0161916827192,9.71038091343309,8.59480876822583,10.669158483429,6.70405924248657,21.1384844291981,7.17657699350981,11.5576646059405,11.1116716421827,2.0720530270516,4.37421528707281,6.17701067657611,2.54967644990783,3.49878630809145,3.45499934511059,6.68269432610579,16.449471666219,15.2489600345137,11.77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| ||
|short_description=p1@Fam113a | |short_description=p1@Fam113a | ||
}} | }} |
Latest revision as of 17:42, 25 September 2015
Short description: | p1@Fam113a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam113a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1392 |
Association with transcript: | 0bp_to_ENSMUST00000089581, ENSMUST00000123977, ENSMUST00000131561, ENSMUST00000153663, NM_178762, uc008miv.2, uc008miw.2, uc008mix.2, uc008miy.2_5end |
EntrezGene: | Fam113a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.14e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.14e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.57e-21 | 73 |
neurectoderm | 4.64e-20 | 64 |
neural plate | 4.64e-20 | 64 |
presumptive neural plate | 4.64e-20 | 64 |
nervous system | 1.06e-19 | 75 |
regional part of nervous system | 1.51e-19 | 54 |
ectoderm-derived structure | 2.04e-19 | 95 |
ectoderm | 2.04e-19 | 95 |
presumptive ectoderm | 2.04e-19 | 95 |
neural tube | 2.45e-19 | 52 |
neural rod | 2.45e-19 | 52 |
future spinal cord | 2.45e-19 | 52 |
neural keel | 2.45e-19 | 52 |
pre-chordal neural plate | 1.64e-18 | 49 |
brain | 3.18e-18 | 47 |
future brain | 3.18e-18 | 47 |
regional part of brain | 1.45e-17 | 46 |
ecto-epithelium | 1.81e-17 | 73 |
anterior neural tube | 1.07e-16 | 40 |
regional part of forebrain | 4.20e-16 | 39 |
forebrain | 4.20e-16 | 39 |
future forebrain | 4.20e-16 | 39 |
gray matter | 1.97e-13 | 34 |
brain grey matter | 2.53e-12 | 29 |
regional part of telencephalon | 2.53e-12 | 29 |
telencephalon | 2.53e-12 | 29 |
structure with developmental contribution from neural crest | 4.21e-11 | 92 |
cerebral cortex | 1.35e-09 | 21 |
cerebral hemisphere | 1.35e-09 | 21 |
pallium | 1.35e-09 | 21 |
regional part of cerebral cortex | 1.16e-07 | 17 |
tube | 1.79e-07 | 114 |
anatomical conduit | 3.54e-07 | 122 |
tissue | 8.62e-07 | 349 |