FFCP PHASE1:Mm9::chr8:74009896..74009934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=382014 | |EntrezGene=382014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=720 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PB70 | |UniProt=Q6PB70 | ||
|association_with_transcript=31bp_to_ENSMUST00000093450,NM_001164679,uc009mdl.2,uc009mdm.2_5end | |association_with_transcript=31bp_to_ENSMUST00000093450,NM_001164679,uc009mdl.2,uc009mdm.2_5end | ||
|cluster_id=chr8:74009896..74009934,- | |||
|description=CAGE_peak_2_at_Ano8_5end | |description=CAGE_peak_2_at_Ano8_5end | ||
|id=chr8:74009896..74009934,- | |id=chr8:74009896..74009934,- | ||
|ontology_enrichment_celltype=CL:0002319!6.71e-20!43;CL:0000221!7.80e-20!44;CL:0000133!7.80e-20!44;CL:0000055!1.24e-17!50;CL:0000540!5.71e-17!33;CL:0000047!5.71e-17!33;CL:0000031!5.71e-17!33;CL:0000404!5.71e-17!33;CL:0000393!6.03e-15!39;CL:0000211!6.03e-15!39;CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0002321!8.86e-12!70;CL:0000220!8.86e-12!70 | |ontology_enrichment_celltype=CL:0002319!6.71e-20!43;CL:0000221!7.80e-20!44;CL:0000133!7.80e-20!44;CL:0000055!1.24e-17!50;CL:0000540!5.71e-17!33;CL:0000047!5.71e-17!33;CL:0000031!5.71e-17!33;CL:0000404!5.71e-17!33;CL:0000393!6.03e-15!39;CL:0000211!6.03e-15!39;CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0002321!8.86e-12!70;CL:0000220!8.86e-12!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.29e-20,43;CL:0000221,4.99e-20,44;CL:0000133,4.99e-20,44;CL:0000540,3.92e-17,33;CL:0000047,3.92e-17,33;CL:0000031,3.92e-17,33;CL:0000404,3.92e-17,33;CL:0000393,4.38e-15,39;CL:0000211,4.38e-15,39;CL:0000117,1.80e-14,23;CL:0000337,1.80e-14,23;CL:0002321,4.09e-12,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.23e-31!75;UBERON:0001016!6.23e-31!75;UBERON:0001017!7.79e-30!73;UBERON:0005743!7.79e-30!73;UBERON:0004121!4.68e-28!102;UBERON:0000924!4.68e-28!102;UBERON:0006601!4.68e-28!102;UBERON:0001049!5.37e-21!52;UBERON:0005068!5.37e-21!52;UBERON:0006241!5.37e-21!52;UBERON:0007135!5.37e-21!52;UBERON:0002346!8.41e-21!71;UBERON:0003075!8.41e-21!71;UBERON:0007284!8.41e-21!71;UBERON:0000033!5.39e-20!63;UBERON:0000955!8.96e-19!50;UBERON:0006238!8.96e-19!50;UBERON:0002616!3.01e-18!49;UBERON:0002020!3.36e-15!34;UBERON:0003056!4.84e-15!49;UBERON:0003080!6.10e-15!40;UBERON:0002780!1.38e-14!39;UBERON:0001890!1.38e-14!39;UBERON:0006240!1.38e-14!39;UBERON:0000153!8.70e-13!94;UBERON:0007811!8.80e-13!86;UBERON:0002791!3.80e-12!29;UBERON:0003528!3.80e-12!29;UBERON:0001893!3.80e-12!29;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21;UBERON:0003076!7.62e-07!12;UBERON:0003057!7.62e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!6.23e-31!75;UBERON:0001016!6.23e-31!75;UBERON:0001017!7.79e-30!73;UBERON:0005743!7.79e-30!73;UBERON:0004121!4.68e-28!102;UBERON:0000924!4.68e-28!102;UBERON:0006601!4.68e-28!102;UBERON:0001049!5.37e-21!52;UBERON:0005068!5.37e-21!52;UBERON:0006241!5.37e-21!52;UBERON:0007135!5.37e-21!52;UBERON:0002346!8.41e-21!71;UBERON:0003075!8.41e-21!71;UBERON:0007284!8.41e-21!71;UBERON:0000033!5.39e-20!63;UBERON:0000955!8.96e-19!50;UBERON:0006238!8.96e-19!50;UBERON:0002616!3.01e-18!49;UBERON:0002020!3.36e-15!34;UBERON:0003056!4.84e-15!49;UBERON:0003080!6.10e-15!40;UBERON:0002780!1.38e-14!39;UBERON:0001890!1.38e-14!39;UBERON:0006240!1.38e-14!39;UBERON:0000153!8.70e-13!94;UBERON:0007811!8.80e-13!86;UBERON:0002791!3.80e-12!29;UBERON:0003528!3.80e-12!29;UBERON:0001893!3.80e-12!29;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21;UBERON:0003076!7.62e-07!12;UBERON:0003057!7.62e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.03e-31,75;UBERON:0001017,3.90e-30,73;UBERON:0004121,2.12e-29,95;UBERON:0000924,2.12e-29,95;UBERON:0006601,2.12e-29,95;UBERON:0002346,2.06e-22,64;UBERON:0003075,2.06e-22,64;UBERON:0007284,2.06e-22,64;UBERON:0000073,1.08e-21,54;UBERON:0001049,3.34e-21,52;UBERON:0005068,3.34e-21,52;UBERON:0006241,3.34e-21,52;UBERON:0007135,3.34e-21,52;UBERON:0010371,1.18e-20,73;UBERON:0000955,6.29e-18,47;UBERON:0006238,6.29e-18,47;UBERON:0002616,2.10e-17,46;UBERON:0010314,1.38e-16,92;UBERON:0002020,2.41e-15,34;UBERON:0003080,4.40e-15,40;UBERON:0003056,5.16e-15,49;UBERON:0002780,1.01e-14,39;UBERON:0001890,1.01e-14,39;UBERON:0006240,1.01e-14,39;UBERON:0003528,2.93e-12,29;UBERON:0002791,2.93e-12,29;UBERON:0001893,2.93e-12,29;UBERON:0000956,8.79e-08,21;UBERON:0001869,8.79e-08,21;UBERON:0000203,8.79e-08,21;UBERON:0003076,6.69e-07,12;UBERON:0003057,6.69e-07,12 | |||
|phase1_expression=2.88267924788629,0.348975407639361,0.454999239389536,1.81478526784098,2.50447864973174,1.34303417529512,1.86890112476421,1.54947988129892,0.422366166455,0.468129052643987,0.34243593645101,0.0797721589953364,1.54080656938085,3.05971408466491,0,0,0,1.57731082679119,0.822686601634433,1.69755860719212,1.61582251287033,2.28369187762036,1.30599894569468,1.27993938234725,0.91763712426868,0.57423196411502,0,0.861884930743556,1.52018735565099,1.76421090831952,1.33038306393183,0,0.61506478758457,0,1.44425809875637,1.49611180822643,0.816677425049476,0,0.7813353445238,0.523523743973798,0,0,0,1.76255545165808,2.12891555560981,3.85448179539531,3.12956537739216,3.05235218932625,2.85592037554813,3.30530828426282,1.95980990275508,4.31257693094915,0.671130424230945,3.62681071005672,2.01656279485478,2.05807548828758,2.0057340795713,0.515672092277442,8.09265843438391,7.93486468908049,8.23980824558033,1.35537812827653,0.889294796111139,3.5995988691256,4.94433181283487,6.3943210345149,4.19440154725767,6.53171119046643,7.46565208621039,6.88530285491622,9.04397333810943,8.2838785477103,9.05561017901615,6.24703075996266,7.76348315247715,9.19218786610021,4.40463523997555,4.46905683298157,2.61131106535614,9.23204014111357,10.4295913706747,8.33461392890816,5.02529398202486,6.19038871034848,3.81995619442025,5.00868595305235,6.26435395516053,7.82877672466262,3.93776205332557,4.6854367266207,1.15945795480671,1.72084775396277,0,0,0.649776417447669,0.448026887097336,2.38755514223978,4.60161870960756,3.11743205523443,3.88673531961374,2.39433813620357,6.41632387071589,7.64415719119937,7.11066703153331,2.81438353314578,1.52015919285059,4.04419556011827,0.45673551887624,0,1.7813056687779,2.25530924795977,1.82679286987285,2.7673859670727,1.3565037649736,1.17588707135705,2.51333182659351,0.494389935468748,0.578397427679647,0,2.10296904931632,2.20841518460394,0.969750506270444,1.86391761218122,5.85561594023094,4.60782754989601,1.02182822083437,1.07833612055328,0,1.14363204365758,3.59497534571574,4.57500602818627,9.92669381691629,3.30266208365325,3.06858548796397,5.194701113989,4.70499662896497,1.83310854930569,1.61729061793121,0.252722758433675,1.68353484709179,1.82168620147785,3.67843367093557,0.900310649026746,2.86339153887859,3.40182495756639,3.20284300712124,5.24729657534481,2.32833033665114,2.58681591519411,3.02569728268511,2.11141348996739,2.41115305670332,1.66828349535359,2.78601733217733,3.08673204611915,1.19420560091096,0,0.257347907114715,0.284163499395593,2.07125772535502,0.469052119962192,1.08037236876609,1.89395788468168,1.77087808572663,1.85120535464854,1.62773761325285,1.60964040839772,0.583826711835847,1.6455984991348,1.80584210487005,2.02672023864639,2.92399974850665,2.63460138349261,1.74468344388483,2.73376933133365,6.68879980465349,1.32167513193519,0.264450566663544,1.91959425481711,3.0190767341857,1.9330119198314,0.80673409849337,1.11189021922435,1.90225626112559,0,0.823494773620054,1.75934646160189,1.79060824837036,1.9496408711912,1.79763881730844,0.432276099749388,0.796565093017469,2.46568271239006,2.17072173958485,1.1270773567308,1.62921062276251,1.35766741017338,1.61312385747733,1.70738650235495,0.738050739898011,0.470996183524124,0.616985819609003,0.889357881261447,1.16791574001266,0.786235980452812,0,0.608580364165509,0.72353147925725,0.50925170356284,0.863088412352432,0.648540907100142,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,0.505157755894224,0.358794827043824,1.92977408545347,0.739012760666419,1.89491411770485,0.814824882210129,1.01847051465113,1.17345124144251,2.34508760418542,1.6663054862021,2.34160377429359,3.31033802623001,1.99318220683897,3.02964060449226,2.62181303545181,1.72684981865896,2.02508682014116,1.50791283939272,1.08781136763742,1.47529281905711,1.10374698521893,4.49541651965817,3.28192722458169,2.29508923527346,3.02965112645248,3.15508219416257,3.51394869866975,5.81643173878557,3.34556317133573,3.11918143715352,2.54768877709949,3.23848561339915,3.50707029493574,5.53402889125133,4.81981974632711,1.84522110770749,2.31485284767432,2.28041743095006,1.81467135269789,1.32745138339963,3.39892890616974,2.41858845571801,0.943025398779491,0.885905678642318,2.15204603560749,1.55056975900933,1.81766864738753,2.49548164869305,2.21225730555071,0,2.06271086496374,3.06395645178409,2.16073312837572,3.75140182969988,3.00071849044229,2.6601035046341,3.56737635204141,3.62007845324666,2.74018454203139,1.87737366450968,1.27099242518292,0.661585194164886,1.15420377059036,2.74489525383039,2.77439454669517,2.50681922406587,1.31312719796049,0.874442509889552,5.19190845629427,1.19609616558497,3.50857675537478,1.48155621895769,0.188368457004691,0.27338845544205,1.37266903923914,0.849892149969277,1.11961161858926,0.829199842826543,1.90934123603023,2.37251995185852,4.26970880966382,1.18805874903981,2.09088296014469,1.52853794622324,1.07891477107857,2.39695021603474,1.04702376793612,2.20345454596048,4.34937519160848,0,2.0932316446157,0.496375471371293,2.33341426012857,1.54991788173277,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| 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| ||
|short_description=p2@Ano8 | |short_description=p2@Ano8 | ||
}} | }} |
Latest revision as of 18:16, 25 September 2015
Short description: | p2@Ano8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ano8_5end |
Coexpression cluster: | MCL_coexpression_mm9:720 |
Association with transcript: | 31bp_to_ENSMUST00000093450, NM_001164679, uc009mdl.2, uc009mdm.2_5end |
EntrezGene: | Ano8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.29e-20 | 43 |
ectodermal cell | 4.99e-20 | 44 |
neurectodermal cell | 4.99e-20 | 44 |
neuron | 3.92e-17 | 33 |
neuronal stem cell | 3.92e-17 | 33 |
neuroblast | 3.92e-17 | 33 |
electrically signaling cell | 3.92e-17 | 33 |
electrically responsive cell | 4.38e-15 | 39 |
electrically active cell | 4.38e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.80e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.80e-14 | 23 |
embryonic cell | 4.09e-12 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.03e-31 | 75 |
central nervous system | 3.90e-30 | 73 |
ectoderm-derived structure | 2.12e-29 | 95 |
ectoderm | 2.12e-29 | 95 |
presumptive ectoderm | 2.12e-29 | 95 |
neurectoderm | 2.06e-22 | 64 |
neural plate | 2.06e-22 | 64 |
presumptive neural plate | 2.06e-22 | 64 |
regional part of nervous system | 1.08e-21 | 54 |
neural tube | 3.34e-21 | 52 |
neural rod | 3.34e-21 | 52 |
future spinal cord | 3.34e-21 | 52 |
neural keel | 3.34e-21 | 52 |
ecto-epithelium | 1.18e-20 | 73 |
brain | 6.29e-18 | 47 |
future brain | 6.29e-18 | 47 |
regional part of brain | 2.10e-17 | 46 |
structure with developmental contribution from neural crest | 1.38e-16 | 92 |
gray matter | 2.41e-15 | 34 |
anterior neural tube | 4.40e-15 | 40 |
pre-chordal neural plate | 5.16e-15 | 49 |
regional part of forebrain | 1.01e-14 | 39 |
forebrain | 1.01e-14 | 39 |
future forebrain | 1.01e-14 | 39 |
brain grey matter | 2.93e-12 | 29 |
regional part of telencephalon | 2.93e-12 | 29 |
telencephalon | 2.93e-12 | 29 |
cerebral cortex | 8.79e-08 | 21 |
cerebral hemisphere | 8.79e-08 | 21 |
pallium | 8.79e-08 | 21 |
posterior neural tube | 6.69e-07 | 12 |
chordal neural plate | 6.69e-07 | 12 |