FFCP PHASE1:Mm9::chr8:74009896..74009934,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:74009896..74009934,-
|short_description=p2@Ano8
|description=CAGE_peak_2_at_Ano8_5end
|association_with_transcript=31bp_to_ENSMUST00000093450,NM_001164679,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382014 | |EntrezGene=382014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=720 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PB70 | |UniProt=Q6PB70 | ||
|association_with_transcript=31bp_to_ENSMUST00000093450,NM_001164679,uc009mdl.2,uc009mdm.2_5end | |||
|cluster_id=chr8:74009896..74009934,- | |||
|description=CAGE_peak_2_at_Ano8_5end | |||
|id=chr8:74009896..74009934,- | |||
|ontology_enrichment_celltype=CL:0002319!6.71e-20!43;CL:0000221!7.80e-20!44;CL:0000133!7.80e-20!44;CL:0000055!1.24e-17!50;CL:0000540!5.71e-17!33;CL:0000047!5.71e-17!33;CL:0000031!5.71e-17!33;CL:0000404!5.71e-17!33;CL:0000393!6.03e-15!39;CL:0000211!6.03e-15!39;CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0002321!8.86e-12!70;CL:0000220!8.86e-12!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.29e-20,43;CL:0000221,4.99e-20,44;CL:0000133,4.99e-20,44;CL:0000540,3.92e-17,33;CL:0000047,3.92e-17,33;CL:0000031,3.92e-17,33;CL:0000404,3.92e-17,33;CL:0000393,4.38e-15,39;CL:0000211,4.38e-15,39;CL:0000117,1.80e-14,23;CL:0000337,1.80e-14,23;CL:0002321,4.09e-12,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.23e-31!75;UBERON:0001016!6.23e-31!75;UBERON:0001017!7.79e-30!73;UBERON:0005743!7.79e-30!73;UBERON:0004121!4.68e-28!102;UBERON:0000924!4.68e-28!102;UBERON:0006601!4.68e-28!102;UBERON:0001049!5.37e-21!52;UBERON:0005068!5.37e-21!52;UBERON:0006241!5.37e-21!52;UBERON:0007135!5.37e-21!52;UBERON:0002346!8.41e-21!71;UBERON:0003075!8.41e-21!71;UBERON:0007284!8.41e-21!71;UBERON:0000033!5.39e-20!63;UBERON:0000955!8.96e-19!50;UBERON:0006238!8.96e-19!50;UBERON:0002616!3.01e-18!49;UBERON:0002020!3.36e-15!34;UBERON:0003056!4.84e-15!49;UBERON:0003080!6.10e-15!40;UBERON:0002780!1.38e-14!39;UBERON:0001890!1.38e-14!39;UBERON:0006240!1.38e-14!39;UBERON:0000153!8.70e-13!94;UBERON:0007811!8.80e-13!86;UBERON:0002791!3.80e-12!29;UBERON:0003528!3.80e-12!29;UBERON:0001893!3.80e-12!29;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21;UBERON:0003076!7.62e-07!12;UBERON:0003057!7.62e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.03e-31,75;UBERON:0001017,3.90e-30,73;UBERON:0004121,2.12e-29,95;UBERON:0000924,2.12e-29,95;UBERON:0006601,2.12e-29,95;UBERON:0002346,2.06e-22,64;UBERON:0003075,2.06e-22,64;UBERON:0007284,2.06e-22,64;UBERON:0000073,1.08e-21,54;UBERON:0001049,3.34e-21,52;UBERON:0005068,3.34e-21,52;UBERON:0006241,3.34e-21,52;UBERON:0007135,3.34e-21,52;UBERON:0010371,1.18e-20,73;UBERON:0000955,6.29e-18,47;UBERON:0006238,6.29e-18,47;UBERON:0002616,2.10e-17,46;UBERON:0010314,1.38e-16,92;UBERON:0002020,2.41e-15,34;UBERON:0003080,4.40e-15,40;UBERON:0003056,5.16e-15,49;UBERON:0002780,1.01e-14,39;UBERON:0001890,1.01e-14,39;UBERON:0006240,1.01e-14,39;UBERON:0003528,2.93e-12,29;UBERON:0002791,2.93e-12,29;UBERON:0001893,2.93e-12,29;UBERON:0000956,8.79e-08,21;UBERON:0001869,8.79e-08,21;UBERON:0000203,8.79e-08,21;UBERON:0003076,6.69e-07,12;UBERON:0003057,6.69e-07,12 | |||
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| ||
|short_description=p2@Ano8 | |||
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Latest revision as of 18:16, 25 September 2015
Short description: | p2@Ano8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ano8_5end |
Coexpression cluster: | MCL_coexpression_mm9:720 |
Association with transcript: | 31bp_to_ENSMUST00000093450, NM_001164679, uc009mdl.2, uc009mdm.2_5end |
EntrezGene: | Ano8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.29e-20 | 43 |
ectodermal cell | 4.99e-20 | 44 |
neurectodermal cell | 4.99e-20 | 44 |
neuron | 3.92e-17 | 33 |
neuronal stem cell | 3.92e-17 | 33 |
neuroblast | 3.92e-17 | 33 |
electrically signaling cell | 3.92e-17 | 33 |
electrically responsive cell | 4.38e-15 | 39 |
electrically active cell | 4.38e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.80e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.80e-14 | 23 |
embryonic cell | 4.09e-12 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.03e-31 | 75 |
central nervous system | 3.90e-30 | 73 |
ectoderm-derived structure | 2.12e-29 | 95 |
ectoderm | 2.12e-29 | 95 |
presumptive ectoderm | 2.12e-29 | 95 |
neurectoderm | 2.06e-22 | 64 |
neural plate | 2.06e-22 | 64 |
presumptive neural plate | 2.06e-22 | 64 |
regional part of nervous system | 1.08e-21 | 54 |
neural tube | 3.34e-21 | 52 |
neural rod | 3.34e-21 | 52 |
future spinal cord | 3.34e-21 | 52 |
neural keel | 3.34e-21 | 52 |
ecto-epithelium | 1.18e-20 | 73 |
brain | 6.29e-18 | 47 |
future brain | 6.29e-18 | 47 |
regional part of brain | 2.10e-17 | 46 |
structure with developmental contribution from neural crest | 1.38e-16 | 92 |
gray matter | 2.41e-15 | 34 |
anterior neural tube | 4.40e-15 | 40 |
pre-chordal neural plate | 5.16e-15 | 49 |
regional part of forebrain | 1.01e-14 | 39 |
forebrain | 1.01e-14 | 39 |
future forebrain | 1.01e-14 | 39 |
brain grey matter | 2.93e-12 | 29 |
regional part of telencephalon | 2.93e-12 | 29 |
telencephalon | 2.93e-12 | 29 |
cerebral cortex | 8.79e-08 | 21 |
cerebral hemisphere | 8.79e-08 | 21 |
pallium | 8.79e-08 | 21 |
posterior neural tube | 6.69e-07 | 12 |
chordal neural plate | 6.69e-07 | 12 |