FFCP PHASE1:Mm9::chr5:150438773..150438788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15505 | |EntrezGene=15505 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q61699 | |UniProt=Q61699 | ||
|association_with_transcript=19bp_to_ENSMUST00000110499_5end | |association_with_transcript=19bp_to_ENSMUST00000110499_5end | ||
|cluster_id=chr5:150438773..150438788,- | |||
|description=CAGE_peak_4_at_Hsph1_5end | |description=CAGE_peak_4_at_Hsph1_5end | ||
|id=chr5:150438773..150438788,- | |id=chr5:150438773..150438788,- | ||
|ontology_enrichment_celltype=CL:0000393!6.18e-08!39;CL:0000211!6.18e-08!39;CL:0000540!9.70e-08!33;CL:0000047!9.70e-08!33;CL:0000031!9.70e-08!33;CL:0000404!9.70e-08!33;CL:0000117!1.27e-07!23;CL:0000337!1.27e-07!23;CL:0002321!6.68e-07!70;CL:0000220!6.68e-07!70 | |ontology_enrichment_celltype=CL:0000393!6.18e-08!39;CL:0000211!6.18e-08!39;CL:0000540!9.70e-08!33;CL:0000047!9.70e-08!33;CL:0000031!9.70e-08!33;CL:0000404!9.70e-08!33;CL:0000117!1.27e-07!23;CL:0000337!1.27e-07!23;CL:0002321!6.68e-07!70;CL:0000220!6.68e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0000540,4.71e-08,33;CL:0000047,4.71e-08,33;CL:0000031,4.71e-08,33;CL:0000404,4.71e-08,33;CL:0000117,5.82e-08,23;CL:0000337,5.82e-08,23;CL:0002321,2.11e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.96e-19!73;UBERON:0005743!1.96e-19!73;UBERON:0001049!4.22e-19!52;UBERON:0005068!4.22e-19!52;UBERON:0006241!4.22e-19!52;UBERON:0007135!4.22e-19!52;UBERON:0000073!4.58e-19!75;UBERON:0001016!4.58e-19!75;UBERON:0000955!5.16e-19!50;UBERON:0006238!5.16e-19!50;UBERON:0002616!2.06e-18!49;UBERON:0002346!2.76e-18!71;UBERON:0003075!2.76e-18!71;UBERON:0007284!2.76e-18!71;UBERON:0000033!8.28e-17!63;UBERON:0003080!1.57e-16!40;UBERON:0002780!6.44e-16!39;UBERON:0001890!6.44e-16!39;UBERON:0006240!6.44e-16!39;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0002020!3.78e-15!34;UBERON:0003056!8.89e-15!49;UBERON:0002791!2.45e-13!29;UBERON:0003528!2.45e-13!29;UBERON:0001893!2.45e-13!29;UBERON:0000153!9.28e-13!94;UBERON:0007811!1.46e-12!86;UBERON:0000956!1.90e-09!21;UBERON:0001869!1.90e-09!21;UBERON:0000203!1.90e-09!21;UBERON:0002021!5.13e-08!10;UBERON:0000411!5.13e-08!10;UBERON:0001950!5.13e-08!10;UBERON:0002619!1.04e-07!17;UBERON:0000475!3.92e-07!200 | |ontology_enrichment_uberon=UBERON:0001017!1.96e-19!73;UBERON:0005743!1.96e-19!73;UBERON:0001049!4.22e-19!52;UBERON:0005068!4.22e-19!52;UBERON:0006241!4.22e-19!52;UBERON:0007135!4.22e-19!52;UBERON:0000073!4.58e-19!75;UBERON:0001016!4.58e-19!75;UBERON:0000955!5.16e-19!50;UBERON:0006238!5.16e-19!50;UBERON:0002616!2.06e-18!49;UBERON:0002346!2.76e-18!71;UBERON:0003075!2.76e-18!71;UBERON:0007284!2.76e-18!71;UBERON:0000033!8.28e-17!63;UBERON:0003080!1.57e-16!40;UBERON:0002780!6.44e-16!39;UBERON:0001890!6.44e-16!39;UBERON:0006240!6.44e-16!39;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0002020!3.78e-15!34;UBERON:0003056!8.89e-15!49;UBERON:0002791!2.45e-13!29;UBERON:0003528!2.45e-13!29;UBERON:0001893!2.45e-13!29;UBERON:0000153!9.28e-13!94;UBERON:0007811!1.46e-12!86;UBERON:0000956!1.90e-09!21;UBERON:0001869!1.90e-09!21;UBERON:0000203!1.90e-09!21;UBERON:0002021!5.13e-08!10;UBERON:0000411!5.13e-08!10;UBERON:0001950!5.13e-08!10;UBERON:0002619!1.04e-07!17;UBERON:0000475!3.92e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-21,54;UBERON:0001017,1.87e-20,73;UBERON:0001016,4.59e-20,75;UBERON:0001049,5.66e-20,52;UBERON:0005068,5.66e-20,52;UBERON:0006241,5.66e-20,52;UBERON:0007135,5.66e-20,52;UBERON:0002346,2.02e-18,64;UBERON:0003075,2.02e-18,64;UBERON:0007284,2.02e-18,64;UBERON:0000955,6.23e-18,47;UBERON:0006238,6.23e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0003080,4.00e-17,40;UBERON:0002780,1.71e-16,39;UBERON:0001890,1.71e-16,39;UBERON:0006240,1.71e-16,39;UBERON:0002020,1.03e-15,34;UBERON:0010371,1.16e-15,73;UBERON:0003056,2.69e-15,49;UBERON:0004121,4.03e-15,95;UBERON:0000924,4.03e-15,95;UBERON:0006601,4.03e-15,95;UBERON:0003528,7.35e-14,29;UBERON:0002791,7.35e-14,29;UBERON:0001893,7.35e-14,29;UBERON:0010314,6.15e-10,92;UBERON:0000956,7.25e-10,21;UBERON:0001869,7.25e-10,21;UBERON:0000203,7.25e-10,21;UBERON:0002021,3.57e-08,10;UBERON:0000411,3.57e-08,10;UBERON:0001950,3.57e-08,10;UBERON:0002619,4.40e-08,17 | |||
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| ||
|short_description=p4@Hsph1 | |short_description=p4@Hsph1 | ||
}} | }} |
Latest revision as of 18:52, 25 September 2015
Short description: | p4@Hsph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hsph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 19bp_to_ENSMUST00000110499_5end |
EntrezGene: | Hsph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.12e-08 | 39 |
electrically active cell | 2.12e-08 | 39 |
neuron | 4.71e-08 | 33 |
neuronal stem cell | 4.71e-08 | 33 |
neuroblast | 4.71e-08 | 33 |
electrically signaling cell | 4.71e-08 | 33 |
CNS neuron (sensu Vertebrata) | 5.82e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.82e-08 | 23 |
embryonic cell | 2.11e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.50e-21 | 54 |
central nervous system | 1.87e-20 | 73 |
nervous system | 4.59e-20 | 75 |
neural tube | 5.66e-20 | 52 |
neural rod | 5.66e-20 | 52 |
future spinal cord | 5.66e-20 | 52 |
neural keel | 5.66e-20 | 52 |
neurectoderm | 2.02e-18 | 64 |
neural plate | 2.02e-18 | 64 |
presumptive neural plate | 2.02e-18 | 64 |
brain | 6.23e-18 | 47 |
future brain | 6.23e-18 | 47 |
regional part of brain | 2.50e-17 | 46 |
anterior neural tube | 4.00e-17 | 40 |
regional part of forebrain | 1.71e-16 | 39 |
forebrain | 1.71e-16 | 39 |
future forebrain | 1.71e-16 | 39 |
gray matter | 1.03e-15 | 34 |
ecto-epithelium | 1.16e-15 | 73 |
pre-chordal neural plate | 2.69e-15 | 49 |
ectoderm-derived structure | 4.03e-15 | 95 |
ectoderm | 4.03e-15 | 95 |
presumptive ectoderm | 4.03e-15 | 95 |
brain grey matter | 7.35e-14 | 29 |
regional part of telencephalon | 7.35e-14 | 29 |
telencephalon | 7.35e-14 | 29 |
structure with developmental contribution from neural crest | 6.15e-10 | 92 |
cerebral cortex | 7.25e-10 | 21 |
cerebral hemisphere | 7.25e-10 | 21 |
pallium | 7.25e-10 | 21 |
occipital lobe | 3.57e-08 | 10 |
visual cortex | 3.57e-08 | 10 |
neocortex | 3.57e-08 | 10 |
regional part of cerebral cortex | 4.40e-08 | 17 |