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FFCP PHASE1:Mm9::chr5:150438773..150438788,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:150438773..150438788,-
|DHSsupport=NA
|short_description=p4@Hsph1
|DPIdataset=NA
|description=CAGE_peak_4_at_Hsph1_5end
|association_with_transcript=19bp_to_ENSMUST00000110499_5end
|EntrezGene=15505
|EntrezGene=15505
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q61699
|UniProt=Q61699
|association_with_transcript=19bp_to_ENSMUST00000110499_5end
|cluster_id=chr5:150438773..150438788,-
|description=CAGE_peak_4_at_Hsph1_5end
|id=chr5:150438773..150438788,-
|ontology_enrichment_celltype=CL:0000393!6.18e-08!39;CL:0000211!6.18e-08!39;CL:0000540!9.70e-08!33;CL:0000047!9.70e-08!33;CL:0000031!9.70e-08!33;CL:0000404!9.70e-08!33;CL:0000117!1.27e-07!23;CL:0000337!1.27e-07!23;CL:0002321!6.68e-07!70;CL:0000220!6.68e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0000540,4.71e-08,33;CL:0000047,4.71e-08,33;CL:0000031,4.71e-08,33;CL:0000404,4.71e-08,33;CL:0000117,5.82e-08,23;CL:0000337,5.82e-08,23;CL:0002321,2.11e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.96e-19!73;UBERON:0005743!1.96e-19!73;UBERON:0001049!4.22e-19!52;UBERON:0005068!4.22e-19!52;UBERON:0006241!4.22e-19!52;UBERON:0007135!4.22e-19!52;UBERON:0000073!4.58e-19!75;UBERON:0001016!4.58e-19!75;UBERON:0000955!5.16e-19!50;UBERON:0006238!5.16e-19!50;UBERON:0002616!2.06e-18!49;UBERON:0002346!2.76e-18!71;UBERON:0003075!2.76e-18!71;UBERON:0007284!2.76e-18!71;UBERON:0000033!8.28e-17!63;UBERON:0003080!1.57e-16!40;UBERON:0002780!6.44e-16!39;UBERON:0001890!6.44e-16!39;UBERON:0006240!6.44e-16!39;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0002020!3.78e-15!34;UBERON:0003056!8.89e-15!49;UBERON:0002791!2.45e-13!29;UBERON:0003528!2.45e-13!29;UBERON:0001893!2.45e-13!29;UBERON:0000153!9.28e-13!94;UBERON:0007811!1.46e-12!86;UBERON:0000956!1.90e-09!21;UBERON:0001869!1.90e-09!21;UBERON:0000203!1.90e-09!21;UBERON:0002021!5.13e-08!10;UBERON:0000411!5.13e-08!10;UBERON:0001950!5.13e-08!10;UBERON:0002619!1.04e-07!17;UBERON:0000475!3.92e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-21,54;UBERON:0001017,1.87e-20,73;UBERON:0001016,4.59e-20,75;UBERON:0001049,5.66e-20,52;UBERON:0005068,5.66e-20,52;UBERON:0006241,5.66e-20,52;UBERON:0007135,5.66e-20,52;UBERON:0002346,2.02e-18,64;UBERON:0003075,2.02e-18,64;UBERON:0007284,2.02e-18,64;UBERON:0000955,6.23e-18,47;UBERON:0006238,6.23e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0003080,4.00e-17,40;UBERON:0002780,1.71e-16,39;UBERON:0001890,1.71e-16,39;UBERON:0006240,1.71e-16,39;UBERON:0002020,1.03e-15,34;UBERON:0010371,1.16e-15,73;UBERON:0003056,2.69e-15,49;UBERON:0004121,4.03e-15,95;UBERON:0000924,4.03e-15,95;UBERON:0006601,4.03e-15,95;UBERON:0003528,7.35e-14,29;UBERON:0002791,7.35e-14,29;UBERON:0001893,7.35e-14,29;UBERON:0010314,6.15e-10,92;UBERON:0000956,7.25e-10,21;UBERON:0001869,7.25e-10,21;UBERON:0000203,7.25e-10,21;UBERON:0002021,3.57e-08,10;UBERON:0000411,3.57e-08,10;UBERON:0001950,3.57e-08,10;UBERON:0002619,4.40e-08,17
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|phase1_expression=7.36684696682052,1.04692622291808,0.454999239389536,0.90739263392049,1.50268718983904,2.51818907867835,2.10251376535973,3.09895976259783,6.19470377467334,6.78787126333781,3.76679530096111,5.98291192465023,0.856003649656029,3.05971408466491,0.999329285446988,0.607425802169478,0,0.157731082679119,0.274228867211478,0.84877930359606,4.84746753861098,0.992909512008853,1.04479915655574,0.47997726838022,0,1.14846392823004,2.58457197695445,2.80112602491656,0.950117097281869,0.252030129759931,0.443461021310609,0,0.61506478758457,0,4.62162591602039,6.81562045969819,6.53341940039581,0,0,0,0,0,0,6.16894408080329,4.56196190487815,5.50640256485045,0,1.52617609466313,2.19686182734472,2.72201858703997,2.09979632438044,0,0.503347818173209,0.725362142011344,3.36093799142464,1.80081605225163,2.0057340795713,0,2.02316460859598,3.70293685490423,1.90149421051854,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0.599200221036809,1.15265491596466,6.0139975138917,4.18518408828241,3.99617426567626,4.28476476605705,2.42955395046775,2.44981598429908,3.54628242767475,0,9.91042928994498,12.1302971180928,15.5142598588806,3.03338461779446,6.12967212136145,6.77187381723788,6.42120897703176,7.31591393041184,11.4598685832608,5.30331453852602,7.68807076315156,4.84638559145781,1.66597625333005,1.73814588245607,9.56552812715537,0.860423876981386,2.719885334831,5.39703191637817,1.29955283489534,1.79210754838934,3.23022166303029,5.11290967734173,1.55871602761721,2.12003744706204,1.69012103732017,6.41632387071589,2.54805239706646,14.2213340630666,1.73192832808971,1.52015919285059,2.02209778005913,3.53970027129086,1.8125651855302,4.00793775475027,2.60227990149204,2.74018930480927,1.61430848079241,2.56228488939458,1.17588707135705,4.27266410520897,0.247194967734374,1.73519228303894,0,1.94120219936891,0.883366073841574,0.969750506270444,0,2.92780797011547,3.14170060220183,1.78819938646014,0.239630249011841,1.19980546198682,0.889491589511453,11.5338792341713,11.8950156732843,8.16753288733619,16.1656617778817,24.2929684463814,11.6361304953354,14.1149898868949,0.712875546952214,0.870848794270651,0.758168275301024,2.31486041475121,2.21204753036596,1.60931473103431,2.34080768746954,2.56198190320716,2.4493139694478,1.15302348256365,1.12442069471675,1.55222022443409,1.07783996466421,3.59301552318857,2.28736461413134,1.53437012699302,3.61461423993277,1.74126083261083,2.26360350048738,1.99034266818493,0,0,0.568326998791185,0.621377317606506,0.938104239924385,0.900310307305074,0.946978942340841,0.983821158737019,0.154267112887378,0.930135779001631,1.07309360559848,0.233530684734339,1.15191894939436,0.492502392237286,0.972825714550269,1.46199987425332,0.658650345873152,0.671032093801859,16.6129059365661,7.71784592844633,0.330418782983798,2.11560453330835,2.34617075588757,3.71578674976702,1.15980715189884,0.605050573870028,0.444756087689741,1.33157938278791,2.84717436926707,0.658795818896044,1.25667604400135,0,1.16978452271472,0.898819408654221,1.29682829924817,0.597423819763102,0.948339504765408,2.39921876480431,2.25415471346161,2.03651327845314,2.32742984601151,1.19230893813542,1.96033265085198,3.69025369949005,2.82597710114475,3.82531208157582,4.44678940630723,2.00214126859313,1.76903095601883,1.12431056192427,0.405720242777006,1.4470629585145,0.763877555344259,0.575392274901621,0,1.92192989231657,1.43768206527355,0,0.624075346229121,3.78868316920668,1.25578189465339,2.41221760681684,1.47802552133284,2.84237117655727,1.79261474086228,1.69745085775188,1.64283173801951,1.50755631697634,0,0.780534591431195,0.788175720530955,1.10732344824387,0.956728611944923,1.96635977658886,2.07221978239075,1.44649058581512,0,0.54390568381871,2.95058563811422,1.10374698521893,8.50918126935297,7.73597131508541,4.09837363441689,1.26235463602186,1.89304931649754,1.95219372148319,3.01592756825919,1.91175038362042,3.11918143715352,1.98153571552183,2.42886421004937,1.75353514746787,1.58115111178609,9.63963949265421,3.12268187458191,1.24645922567079,0.488660878060728,4.12425307431339,0,0.242780636154981,1.81394134178851,1.13163047853539,1.18120757152309,1.22974059177571,0.775284879504663,0.363533729477506,1.06949213515416,2.84433082142234,4.21674434299995,3.09406629744561,6.12791290356818,3.24109969256358,1.94038025674132,4.71541477069503,2.48276327099183,2.85390108163313,2.63278432963394,2.74018454203139,2.81606049676452,0.847328283455281,6.83638033970382,1.15420377059036,0.968786560175433,1.20625849856312,0.596861720015682,1.14898629821543,2.04036585640896,11.1255181206306,2.56306321196779,0.619160603889667,1.29636169158798,1.31857919903284,0.683471138605126,1.37266903923914,0.169978429993855,0.979660166265606,0.829199842826543,0,1.26534397432454,2.43983360552218,1.94409613479242,1.67270636811575,2.40198820120795,1.48350781023303,1.57041565878138,2.09404753587224,1.94422459937689,1.24267862617385,0,1.19613236835183,1.98550188548517,1.55560950675238,1.93739735216597,2.02747350588934,0.704143431874524,1.0416350787516,0.943734099831398,0.724752362478018,0,0.948033361884535,2.02725215290164,1.54066435747241,0.649604114888975,1.61124026100733,0.993406773906324,0.841368146639782,0.886137163047463,0.706765149637033,0.533447646584999,0.302478555410522,0.779663045918019,0.865906574762965,0.467507608726276,1.13365191807606,2.88581739386284,1.34570784914214,1.34307693091263,3.67060228661162,2.62755465631655,4.02933573387983,1.50057865355346,1.50471631210609,10.1655331671072,15.1907328047368,16.6139698897425,17.3571714167124,19.8673930733486,15.107877947794,17.550585006027,17.5625269257446,21.2976932222576,22.2636934053283,3.94391920819871,4.78829848081237,1.53660245178721,1.94485373654635,2.30574478890781,2.75765262675021,1.33348036680969,1.44224540067226,2.56735367673452,1.01078884705519,1.52087579934144,2.07488975524684,2.90288673156635,3.00918216302886,2.92920891673628,0.952587382566147,2.31768651889711,4.24400285020151,1.23625770240992,2.20798380201596,1.71434626192708,2.8396128985494,2.38436189947321,1.88950341622027,2.72917203204459,2.36920902096694,3.10977553883713,2.63069711437843,3.12349461845482,1.68342681497322,2.49133538060766,2.26560309463796,2.86461730218783,1.70430525304563,1.35034627686799,3.74715866906919,1.16965804222704,1.71896843238639,1.53030665655075,0.661774257358546,1.15933917810211
|short_description=p4@Hsph1
}}
}}

Latest revision as of 18:52, 25 September 2015

Short description:p4@Hsph1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hsph1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 19bp_to_ENSMUST00000110499_5end
EntrezGene:Hsph1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hsph1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D516.17
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B214.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E816.61
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell2.12e-0839
electrically active cell2.12e-0839
neuron4.71e-0833
neuronal stem cell4.71e-0833
neuroblast4.71e-0833
electrically signaling cell4.71e-0833
CNS neuron (sensu Vertebrata)5.82e-0823
neuroblast (sensu Vertebrata)5.82e-0823
embryonic cell2.11e-0770

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.50e-2154
central nervous system1.87e-2073
nervous system4.59e-2075
neural tube5.66e-2052
neural rod5.66e-2052
future spinal cord5.66e-2052
neural keel5.66e-2052
neurectoderm2.02e-1864
neural plate2.02e-1864
presumptive neural plate2.02e-1864
brain6.23e-1847
future brain6.23e-1847
regional part of brain2.50e-1746
anterior neural tube4.00e-1740
regional part of forebrain1.71e-1639
forebrain1.71e-1639
future forebrain1.71e-1639
gray matter1.03e-1534
ecto-epithelium1.16e-1573
pre-chordal neural plate2.69e-1549
ectoderm-derived structure4.03e-1595
ectoderm4.03e-1595
presumptive ectoderm4.03e-1595
brain grey matter7.35e-1429
regional part of telencephalon7.35e-1429
telencephalon7.35e-1429
structure with developmental contribution from neural crest6.15e-1092
cerebral cortex7.25e-1021
cerebral hemisphere7.25e-1021
pallium7.25e-1021
occipital lobe3.57e-0810
visual cortex3.57e-0810
neocortex3.57e-0810
regional part of cerebral cortex4.40e-0817
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