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FFCP PHASE1:Mm9::chr19:46392472..46392552,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:46392472..46392552,-
|DHSsupport=NA
|short_description=p1@Psd
|DPIdataset=NA
|description=CAGE_peak_1_at_Psd_5end
|association_with_transcript=-93bp_to_uc008htb.1_5end
|EntrezGene=73728
|EntrezGene=73728
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q5DTT2
|UniProt=Q5DTT2
|association_with_transcript=-93bp_to_uc008htb.1_5end
|cluster_id=chr19:46392472..46392552,-
|description=CAGE_peak_1_at_Psd_5end
|id=chr19:46392472..46392552,-
|ontology_enrichment_celltype=CL:0000117!6.79e-10!23;CL:0000337!6.79e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.38e-14!52;UBERON:0005068!1.38e-14!52;UBERON:0006241!1.38e-14!52;UBERON:0007135!1.38e-14!52;UBERON:0002020!1.76e-14!34;UBERON:0001017!6.73e-14!73;UBERON:0005743!6.73e-14!73;UBERON:0000955!1.10e-13!50;UBERON:0006238!1.10e-13!50;UBERON:0000073!3.19e-13!75;UBERON:0001016!3.19e-13!75;UBERON:0002616!4.04e-13!49;UBERON:0002791!1.02e-11!29;UBERON:0003528!1.02e-11!29;UBERON:0001893!1.02e-11!29;UBERON:0003080!1.97e-11!40;UBERON:0002780!5.48e-11!39;UBERON:0001890!5.48e-11!39;UBERON:0006240!5.48e-11!39;UBERON:0002346!7.57e-11!71;UBERON:0003075!7.57e-11!71;UBERON:0007284!7.57e-11!71;UBERON:0000033!7.85e-10!63;UBERON:0003056!2.20e-09!49;UBERON:0004121!2.12e-08!102;UBERON:0000924!2.12e-08!102;UBERON:0006601!2.12e-08!102;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0000956!9.73e-08!21;UBERON:0001869!9.73e-08!21;UBERON:0000203!9.73e-08!21;UBERON:0000468!2.12e-07!333;UBERON:0002619!4.51e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.63e-16,54;UBERON:0002020,9.79e-16,34;UBERON:0001049,7.49e-15,52;UBERON:0005068,7.49e-15,52;UBERON:0006241,7.49e-15,52;UBERON:0007135,7.49e-15,52;UBERON:0001017,3.11e-13,73;UBERON:0003528,9.96e-13,29;UBERON:0002791,9.96e-13,29;UBERON:0001893,9.96e-13,29;UBERON:0000955,3.00e-12,47;UBERON:0006238,3.00e-12,47;UBERON:0001016,3.30e-12,75;UBERON:0002616,1.14e-11,46;UBERON:0003080,1.51e-11,40;UBERON:0002346,3.03e-11,64;UBERON:0003075,3.03e-11,64;UBERON:0007284,3.03e-11,64;UBERON:0002780,4.51e-11,39;UBERON:0001890,4.51e-11,39;UBERON:0006240,4.51e-11,39;UBERON:0002021,1.08e-08,10;UBERON:0000411,1.08e-08,10;UBERON:0001950,1.08e-08,10;UBERON:0003056,1.18e-08,49;UBERON:0010371,1.96e-08,73;UBERON:0000956,2.14e-08,21;UBERON:0001869,2.14e-08,21;UBERON:0000203,2.14e-08,21;UBERON:0004121,1.07e-07,95;UBERON:0000924,1.07e-07,95;UBERON:0006601,1.07e-07,95;UBERON:0002619,1.12e-07,17
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,26.8736796877381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,4.66333883609767,2.20256102594018,4.69434806608824,0.218025156380447,0,0.194429899074283,2.65974201088189,0,0,0,0,0,0.85960031981627,0.515672092277442,21.647861311977,30.6814767977779,31.0577387718028,3.04960078862219,1.77858959222228,0,0,0,0.299600110518405,1.15265491596466,3.42175720617976,4.86021377994086,6.09942387919008,51.9884791614923,54.9962666969518,6.49201235839256,4.02550978276593,8.27296907949019,46.2486700197433,43.7967569632194,43.6242554447731,27.5642341356105,27.9952189423374,28.129322010065,36.2937898701795,65.8432253737066,60.8137026151704,47.7298308467342,45.701309536512,34.2974980318553,0.37863096666592,0.529000920747499,1.73918693221007,0.860423876981386,0,0,0,0,4.63466586434781,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,5.59501010623394,0.776813650941515,0.148442139064825,1.90833859442749,1.52232739156071,2.07553947530453,0.904335843315735,1.29347577849275,0.502666365318702,2.47194967734374,0.144599356919912,0,0.970601099684455,0.220841518460394,0,11.1835056730873,2.92780797011547,3.77004072264219,11.240110429178,0,0,0,32.3547781114417,143.655189285049,35.6858360000535,170.174009468239,232.701066170601,41.7653969564716,78.8492538509302,14.0538322113436,3.4833951770826,1.51633655060205,0.420883711772948,0.130120442962704,0.919608417733892,0.900310649026746,1.35634336052144,1.56483948048054,1.5373646434182,3.5606655332697,1.29351685369508,0.215567992932842,0,0.879755620819744,1.09597866213787,1.94633074457919,1.39300866608867,1.23469281844766,4.77682240364384,0,0,0,5.17814431338755,6.80125573945179,7.56260658136262,5.20838418287463,1.77087808572663,2.00547246753592,1.16266972375204,3.21928081679543,0.700592054203017,0.822799249567402,1.14917224855367,0.486412857275134,0.877199924551994,1.09775057645525,0.536825675041487,219.332416352385,27.8871499547861,0.330418782983798,8.46241813323342,37.7520203447364,39.712470888135,28.7374438748268,24.2020229548011,20.9035361214178,22.2563982551694,15.1849299694244,24.3754452991536,25.6361912976275,34.0215567190368,29.8295053292254,17.0775687644302,10.1584883441106,13.541606581297,0.189667900953082,0.685491075658373,0,1.4255592949172,1.74557238450863,1.26244475802573,1.20149420536089,0,0.156998727841375,0.123397163921801,0.296452627087149,1.83529616287703,2.55526693647164,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,1.48856379067401,1.24815069245824,0.505157755894224,0.538192240565737,0.482443521363367,0,8.90609635321278,4.07412441105065,3.05541154395339,2.11221223459652,0.502518772325447,1.19021820443007,1.17080188714679,1.10344600874334,0.664394068946325,0.478364305972461,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,18.1422166686205,13.244920584919,0,0,2.2085575359138,0.390438744296638,1.93881057959519,0.955875191810208,0.445597348164788,1.13230612315533,1.21443210502468,1.16902343164525,0.790575555893047,55.9099090573944,16.4650498841592,19.2310851960636,22.4784003907935,52.4604991052663,1.32745138339963,4.85561272309963,6.65111825322452,2.26326095707078,4.42952839321159,5.84126781093462,7.23599220871019,2.18120237686503,2.49548164869305,10.1131762539461,0,0,1.02131881726136,0.720244376125241,0.776152102696527,1.28602221018955,0.354680467284547,3.21063871683727,5.43011767986999,7.00269382963578,0.704015124191131,0.63549621259146,0.220528398054962,0,1.93757312035087,1.93001359770099,1.43246812803764,0.656563598980245,14.5740418314925,17.8008289930089,0,3.714963623338,0.740778109478847,0.565105371014073,0.136694227721025,0.457556346413045,0,0.279902904647316,0,35.3228128665592,19.9291675956115,37.4107819513402,44.6062057594039,46.6266900112265,50.8784773528594,58.2613976382425,60.5023295909459,33.2430046319718,19.0534010738935,0,0,0.448549638131936,2.97825282822776,4.66682852025714,5.8121920564979,6.08242051766801,4.45957506853865,3.77592716047455,0.838874755405687,0,0,0,4.45995473638361,1.95150818613172,0.389762468933385,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0,0.167884616364078,47.3314505378867,21.3958022014347,35.7145667321167,9.00347192132076,0.501572104035363,131.022427487159,168.939361798134,161.55653478991,246.265610298504,219.911488846376,184.316110963087,211.282042572555,136.897645780163,190.319811773366,170.860902878101,1.97195960409936,1.19707462020309,5.80494259564056,4.61902762429759,9.4325923182592,12.501358574601,9.55660929546946,7.0051919461224,7.06022261101994,5.30664144703975,6.84394109703647,6.03604292435444,8.61501868722918,8.1311943554184,8.04096565378586,6.66811167796303,7.99601849019503,7.7163688185482,8.65380391686944,7.50714492685426,8.22886205724997,6.034177409417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|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,26.8736796877381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,4.66333883609767,2.20256102594018,4.69434806608824,0.218025156380447,0,0.194429899074283,2.65974201088189,0,0,0,0,0,0.85960031981627,0.515672092277442,21.647861311977,30.6814767977779,31.0577387718028,3.04960078862219,1.77858959222228,0,0,0,0.299600110518405,1.15265491596466,3.42175720617976,4.86021377994086,6.09942387919008,51.9884791614923,54.9962666969518,6.49201235839256,4.02550978276593,8.27296907949019,46.2486700197433,43.7967569632194,43.6242554447731,27.5642341356105,27.9952189423374,28.129322010065,36.2937898701795,65.8432253737066,60.8137026151704,47.7298308467342,45.701309536512,34.2974980318553,0.37863096666592,0.529000920747499,1.73918693221007,0.860423876981386,0,0,0,0,4.63466586434781,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,5.59501010623394,0.776813650941515,0.148442139064825,1.90833859442749,1.52232739156071,2.07553947530453,0.904335843315735,1.29347577849275,0.502666365318702,2.47194967734374,0.144599356919912,0,0.970601099684455,0.220841518460394,0,11.1835056730873,2.92780797011547,3.77004072264219,11.240110429178,0,0,0,32.3547781114417,143.655189285049,35.6858360000535,170.174009468239,232.701066170601,41.7653969564716,78.8492538509302,14.0538322113436,3.4833951770826,1.51633655060205,0.420883711772948,0.130120442962704,0.919608417733892,0.900310649026746,1.35634336052144,1.56483948048054,1.5373646434182,3.5606655332697,1.29351685369508,0.215567992932842,0,0.879755620819744,1.09597866213787,1.94633074457919,1.39300866608867,1.23469281844766,4.77682240364384,0,0,0,5.17814431338755,6.80125573945179,7.56260658136262,5.20838418287463,1.77087808572663,2.00547246753592,1.16266972375204,3.21928081679543,0.700592054203017,0.822799249567402,1.14917224855367,0.486412857275134,0.877199924551994,1.09775057645525,0.536825675041487,219.332416352385,27.8871499547861,0.330418782983798,8.46241813323342,37.7520203447364,39.712470888135,28.7374438748268,24.2020229548011,20.9035361214178,22.2563982551694,15.1849299694244,24.3754452991536,25.6361912976275,34.0215567190368,29.8295053292254,17.0775687644302,10.1584883441106,13.541606581297,0.189667900953082,0.685491075658373,0,1.4255592949172,1.74557238450863,1.26244475802573,1.20149420536089,0,0.156998727841375,0.123397163921801,0.296452627087149,1.83529616287703,2.55526693647164,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,1.48856379067401,1.24815069245824,0.505157755894224,0.538192240565737,0.482443521363367,0,8.90609635321278,4.07412441105065,3.05541154395339,2.11221223459652,0.502518772325447,1.19021820443007,1.17080188714679,1.10344600874334,0.664394068946325,0.478364305972461,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,18.1422166686205,13.244920584919,0,0,2.2085575359138,0.390438744296638,1.93881057959519,0.955875191810208,0.445597348164788,1.13230612315533,1.21443210502468,1.16902343164525,0.790575555893047,55.9099090573944,16.4650498841592,19.2310851960636,22.4784003907935,52.4604991052663,1.32745138339963,4.85561272309963,6.65111825322452,2.26326095707078,4.42952839321159,5.84126781093462,7.23599220871019,2.18120237686503,2.49548164869305,10.1131762539461,0,0,1.02131881726136,0.720244376125241,0.776152102696527,1.28602221018955,0.354680467284547,3.21063871683727,5.43011767986999,7.00269382963578,0.704015124191131,0.63549621259146,0.220528398054962,0,1.93757312035087,1.93001359770099,1.43246812803764,0.656563598980245,14.5740418314925,17.8008289930089,0,3.714963623338,0.740778109478847,0.565105371014073,0.136694227721025,0.457556346413045,0,0.279902904647316,0,35.3228128665592,19.9291675956115,37.4107819513402,44.6062057594039,46.6266900112265,50.8784773528594,58.2613976382425,60.5023295909459,33.2430046319718,19.0534010738935,0,0,0.448549638131936,2.97825282822776,4.66682852025714,5.8121920564979,6.08242051766801,4.45957506853865,3.77592716047455,0.838874755405687,0,0,0,4.45995473638361,1.95150818613172,0.389762468933385,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0,0.167884616364078,47.3314505378867,21.3958022014347,35.7145667321167,9.00347192132076,0.501572104035363,131.022427487159,168.939361798134,161.55653478991,246.265610298504,219.911488846376,184.316110963087,211.282042572555,136.897645780163,190.319811773366,170.860902878101,1.97195960409936,1.19707462020309,5.80494259564056,4.61902762429759,9.4325923182592,12.501358574601,9.55660929546946,7.0051919461224,7.06022261101994,5.30664144703975,6.84394109703647,6.03604292435444,8.61501868722918,8.1311943554184,8.04096565378586,6.66811167796303,7.99601849019503,7.7163688185482,8.65380391686944,7.50714492685426,8.22886205724997,6.034177409417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|short_description=p1@Psd
}}
}}

Latest revision as of 21:08, 25 September 2015

Short description:p1@Psd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Psd_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -93bp_to_uc008htb.1_5end
EntrezGene:Psd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Psd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C321.65
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E565.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I660.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.35
corpus striatum, adult.CNhs10487.19-21D8143.66
corpus striatum, neonate N00.CNhs11226.630-43F135.69
cortex, adult.CNhs10473.12-14D5170.17
cortex, neonate N30.CNhs11107.1392-42F2232.70
diencephalon, adult.CNhs10482.20-12F241.77
diencephalon, neonate N30.CNhs11201.1388-42B278.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E8219.33
hippocampus, neonate N00.CNhs11228.627-43G127.89
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I537.75
intestine, embryo E13.CNhs11010.381-16D539.71
intestine, embryo E15.CNhs10602.976-16D828.74
intestine, embryo E16.CNhs10585.463-22H424.20
intestine, embryo E17.CNhs10582.482-18D320.90
intestine, embryo E18.CNhs10526.1289-20F722.26
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E924.38
intestine, neonate N06.CNhs11102.688-20B825.64
intestine, neonate N07.CNhs11095.720-20F234.02
intestine, neonate N10.CNhs11098.755-23A529.83
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E310.16
intestine, neonate N30.CNhs11131.1384-42G113.54
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.14
medulla oblongata, neonate N30.CNhs11200.1396-42A313.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I955.91
ovary, adult.CNhs10507.91-2I716.47
ovary, embryo E18.CNhs11040.505-44H719.23
ovary, neonate N00.CNhs11217.1299-22I422.48
oviduct, adult pregnant day01.CNhs10500.988-6G652.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C917.80
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H635.32
stomach, embryo E12.CNhs10588.356-43E319.93
stomach, embryo E15.CNhs10603.1252-16G837.41
stomach, embryo E16.CNhs11022.459-17D444.61
stomach, embryo E17.CNhs11006.1035-18D546.63
stomach, embryo E18.CNhs10999.1286-20C650.88
stomach, neonate N03.CNhs11193.1340-24B858.26
stomach, neonate N07.CNhs11210.718-18A960.50
stomach, neonate N25.CNhs11104.1355-25E433.24
stomach, neonate N30.CNhs11134.1386-42I119.05
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E447.33
uterus, adult pregnant day19.CNhs10497.590-15F521.40
uterus, adult.CNhs10509.92-27E535.71
vagina, adult.CNhs10502.89-27D59.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1131.02
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2168.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3161.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7246.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4219.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5184.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6211.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7136.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8190.32
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9170.86
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I513.74
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.30e-1023
neuroblast (sensu Vertebrata)1.30e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.63e-1654
gray matter9.79e-1634
neural tube7.49e-1552
neural rod7.49e-1552
future spinal cord7.49e-1552
neural keel7.49e-1552
central nervous system3.11e-1373
brain grey matter9.96e-1329
regional part of telencephalon9.96e-1329
telencephalon9.96e-1329
brain3.00e-1247
future brain3.00e-1247
nervous system3.30e-1275
regional part of brain1.14e-1146
anterior neural tube1.51e-1140
neurectoderm3.03e-1164
neural plate3.03e-1164
presumptive neural plate3.03e-1164
regional part of forebrain4.51e-1139
forebrain4.51e-1139
future forebrain4.51e-1139
occipital lobe1.08e-0810
visual cortex1.08e-0810
neocortex1.08e-0810
pre-chordal neural plate1.18e-0849
ecto-epithelium1.96e-0873
cerebral cortex2.14e-0821
cerebral hemisphere2.14e-0821
pallium2.14e-0821
ectoderm-derived structure1.07e-0795
ectoderm1.07e-0795
presumptive ectoderm1.07e-0795
regional part of cerebral cortex1.12e-0717
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