FFCP PHASE1:Mm9::chr19:4943049..4943101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240518 | |EntrezGene=240518 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z6V8,D3YYQ7,Q8BXR6 | |UniProt=D3Z6V8,D3YYQ7,Q8BXR6 | ||
|association_with_transcript=0bp_to_ENSMUST00000120475,ENSMUST00000133254,ENSMUST00000133504,ENSMUST00000146289,NM_172835,uc008gbs.2,uc012bgq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000120475,ENSMUST00000133254,ENSMUST00000133504,ENSMUST00000146289,NM_172835,uc008gbs.2,uc012bgq.1_5end | ||
|cluster_id=chr19:4943049..4943101,- | |||
|description=CAGE_peak_1_at_Peli3_5end | |description=CAGE_peak_1_at_Peli3_5end | ||
|id=chr19:4943049..4943101,- | |id=chr19:4943049..4943101,- | ||
|ontology_enrichment_celltype=CL:0000117!1.04e-12!23;CL:0000337!1.04e-12!23;CL:0000540!3.78e-10!33;CL:0000047!3.78e-10!33;CL:0000031!3.78e-10!33;CL:0000404!3.78e-10!33;CL:0000393!8.65e-10!39;CL:0000211!8.65e-10!39;CL:0000221!9.42e-10!44;CL:0000133!9.42e-10!44;CL:0002319!1.70e-09!43;CL:0000055!3.35e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.04e-12!23;CL:0000337!1.04e-12!23;CL:0000540!3.78e-10!33;CL:0000047!3.78e-10!33;CL:0000031!3.78e-10!33;CL:0000404!3.78e-10!33;CL:0000393!8.65e-10!39;CL:0000211!8.65e-10!39;CL:0000221!9.42e-10!44;CL:0000133!9.42e-10!44;CL:0002319!1.70e-09!43;CL:0000055!3.35e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-13,23;CL:0000337,4.03e-13,23;CL:0000540,1.12e-10,33;CL:0000047,1.12e-10,33;CL:0000031,1.12e-10,33;CL:0000404,1.12e-10,33;CL:0000221,3.94e-10,44;CL:0000133,3.94e-10,44;CL:0000393,4.44e-10,39;CL:0000211,4.44e-10,39;CL:0002319,7.26e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.89e-26!102;UBERON:0000924!1.89e-26!102;UBERON:0006601!1.89e-26!102;UBERON:0000033!4.02e-25!63;UBERON:0002346!7.74e-24!71;UBERON:0003075!7.74e-24!71;UBERON:0007284!7.74e-24!71;UBERON:0001017!1.71e-23!73;UBERON:0005743!1.71e-23!73;UBERON:0000073!8.63e-23!75;UBERON:0001016!8.63e-23!75;UBERON:0001049!1.15e-21!52;UBERON:0005068!1.15e-21!52;UBERON:0006241!1.15e-21!52;UBERON:0007135!1.15e-21!52;UBERON:0000955!6.23e-21!50;UBERON:0006238!6.23e-21!50;UBERON:0002616!2.61e-20!49;UBERON:0003056!5.40e-19!49;UBERON:0002020!4.11e-18!34;UBERON:0003080!2.51e-16!40;UBERON:0002780!1.14e-15!39;UBERON:0001890!1.14e-15!39;UBERON:0006240!1.14e-15!39;UBERON:0002791!1.41e-15!29;UBERON:0003528!1.41e-15!29;UBERON:0001893!1.41e-15!29;UBERON:0007811!5.00e-12!86;UBERON:0000153!1.72e-11!94;UBERON:0000956!6.67e-11!21;UBERON:0001869!6.67e-11!21;UBERON:0000203!6.67e-11!21;UBERON:0002619!4.02e-09!17;UBERON:0004111!9.39e-09!122;UBERON:0000468!4.64e-07!333;UBERON:0000025!6.67e-07!114 | |ontology_enrichment_uberon=UBERON:0004121!1.89e-26!102;UBERON:0000924!1.89e-26!102;UBERON:0006601!1.89e-26!102;UBERON:0000033!4.02e-25!63;UBERON:0002346!7.74e-24!71;UBERON:0003075!7.74e-24!71;UBERON:0007284!7.74e-24!71;UBERON:0001017!1.71e-23!73;UBERON:0005743!1.71e-23!73;UBERON:0000073!8.63e-23!75;UBERON:0001016!8.63e-23!75;UBERON:0001049!1.15e-21!52;UBERON:0005068!1.15e-21!52;UBERON:0006241!1.15e-21!52;UBERON:0007135!1.15e-21!52;UBERON:0000955!6.23e-21!50;UBERON:0006238!6.23e-21!50;UBERON:0002616!2.61e-20!49;UBERON:0003056!5.40e-19!49;UBERON:0002020!4.11e-18!34;UBERON:0003080!2.51e-16!40;UBERON:0002780!1.14e-15!39;UBERON:0001890!1.14e-15!39;UBERON:0006240!1.14e-15!39;UBERON:0002791!1.41e-15!29;UBERON:0003528!1.41e-15!29;UBERON:0001893!1.41e-15!29;UBERON:0007811!5.00e-12!86;UBERON:0000153!1.72e-11!94;UBERON:0000956!6.67e-11!21;UBERON:0001869!6.67e-11!21;UBERON:0000203!6.67e-11!21;UBERON:0002619!4.02e-09!17;UBERON:0004111!9.39e-09!122;UBERON:0000468!4.64e-07!333;UBERON:0000025!6.67e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.54e-27,95;UBERON:0000924,5.54e-27,95;UBERON:0006601,5.54e-27,95;UBERON:0002346,4.59e-25,64;UBERON:0003075,4.59e-25,64;UBERON:0007284,4.59e-25,64;UBERON:0001017,1.52e-24,73;UBERON:0010371,3.28e-24,73;UBERON:0000073,8.01e-24,54;UBERON:0001016,1.13e-23,75;UBERON:0001049,2.07e-22,52;UBERON:0005068,2.07e-22,52;UBERON:0006241,2.07e-22,52;UBERON:0007135,2.07e-22,52;UBERON:0003056,1.22e-19,49;UBERON:0000955,1.59e-19,47;UBERON:0006238,1.59e-19,47;UBERON:0002616,6.79e-19,46;UBERON:0002020,1.00e-18,34;UBERON:0003080,7.14e-17,40;UBERON:0002780,3.44e-16,39;UBERON:0001890,3.44e-16,39;UBERON:0006240,3.44e-16,39;UBERON:0003528,4.27e-16,29;UBERON:0002791,4.27e-16,29;UBERON:0001893,4.27e-16,29;UBERON:0010314,1.48e-13,92;UBERON:0000956,3.01e-11,21;UBERON:0001869,3.01e-11,21;UBERON:0000203,3.01e-11,21;UBERON:0002619,2.11e-09,17;UBERON:0004111,2.85e-08,122 | |||
|phase1_expression=4.64431656603902,0,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.774739940649458,0.84473233291,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,1.74840804837995,0.666219523631325,0.202475267389826,0,0.157731082679119,0.274228867211478,0,5.44277056966847,0.595745707205312,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.816677425049476,0,0,0,0,0,0,8.18329316841252,9.0225468785368,4.40512205188036,1.56478268869608,2.18025156380447,4.17403747195497,5.24960727500565,1.95980990275508,1.43752564364972,0.335565212115473,2.17608642603403,0,0.257259436035947,0.85960031981627,2.06268836910977,11.5320382689971,10.0508286061686,8.23980824558033,1.0165335962074,0,3.1496490104849,3.9554654502679,4.9733608046227,2.09720077362883,5.76327457982332,6.73982480005105,8.23536223823313,10.0955981448663,12.2829923293636,11.7060326704355,9.18680994112155,6.90087391331302,6.43453150627015,23.1243350098716,17.2377906415003,19.8152427900554,10.2871304429551,8.32537556781928,10.4182674111352,26.5223849051312,24.7615548413939,18.488587980994,9.72274332063103,7.97281412474976,10.6247684120421,0.530083353332288,2.41828992341714,1.15945795480671,1.72084775396277,2.03991400112325,3.2382191498269,1.94932925234301,3.13618820968135,2.66844398250329,4.09032774187339,2.33807404142582,2.47337702157238,3.94361575374705,5.13305909657271,10.1922095882658,0,0.432982082022428,1.26679932737549,0.505524445014783,2.2836775943812,0,5.78924342352817,1.38788261412909,0.913396434936424,1.38369298353635,3.3158980921577,3.52766121407114,3.89566433121994,2.22475470960936,3.32578520915797,2.65383165584962,1.45590164952668,0.220841518460394,0.484875253135222,1.86391761218122,15.2246014446005,12.5668024088073,0.766371165625774,0.11981512450592,0,0,19.6225737620318,21.0450277296568,13.1937069718508,14.4274185759589,17.6443665557928,18.2853479212413,15.2506787283692,1.93494791315601,2.36373244159177,3.79084137650512,18.0979996062368,1.56144531555244,2.06911893990126,2.52086981727489,4.21973489940002,10.2735113718505,10.8896662242122,18.646643187386,32.596624713116,1.72454394346274,3.02569728268511,1.75951124163949,1.97276159184817,1.94633074457919,2.43776516565517,3.2925141825271,1.99034266818493,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0,0,1.07309360559848,0.467061369468678,0,0.492502392237286,0.729619285912702,0.292399974850665,0.878200461164203,0.536825675041487,9.46304768538573,11.216602749342,0,0.264450566663544,1.49301775374664,2.09013004674395,2.83508414908605,0.80673409849337,2.2237804384487,1.14135375667535,0.949058123089023,2.30578536613615,0.754005626400808,1.1937388322469,0.38992817423824,0,0.864552199498777,1.59313018603494,0.758671603812327,1.37098215131675,4.50830942692322,2.24016460629846,2.71533482034676,2.24434623649019,1.45444035385792,1.03327103585722,1.255989822731,1.97435462274881,4.15033677922008,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,1.86070473834252,0.936113019343682,1.26289438973556,0.538192240565737,2.8946611281802,2.21703828199926,1.51593129416388,1.95557971730431,1.86719594352707,0.938760993154008,2.34508760418542,2.14239276797412,1.17080188714679,1.7339865851681,1.55025282754142,1.59454768657487,2.45794972073607,1.89953480052485,2.89298117163023,1.50791283939272,2.17562273527484,0.983528546038072,1.10374698521893,23.922037908181,21.6841620195576,6.22952792431367,4.54447668967871,1.57754109708128,2.34263246577983,3.01592756825919,1.67278158566786,2.00518806674155,2.26461224631066,0,3.79932615284705,1.18586333383957,15.1021018718249,4.40014264145633,3.73937767701236,1.30309567482861,11.2179683621324,5.30980553359851,0.728341908464944,2.11626489875326,0.565815239267694,0.885905678642318,1.84461088766356,0.516856586336442,0.727067458955011,1.42598951353889,0.948110273807448,0,1.03135543248187,8.5109901438447,2.16073312837572,2.8458910432206,1.92903331528433,1.24138163549592,2.14042581122485,2.13913726782757,3.65357938937519,3.75474732901937,1.27099242518292,2.8668691747145,2.30840754118072,2.58343082713449,1.5078231232039,3.22305328808468,3.11867709515616,0.582961673259701,26.1449675834819,0.341741761595705,0.82554747185289,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,2.86401185404534,1.42351197111511,1.62655573701479,1.72808545314882,1.25452977608681,1.31017538247707,1.61837215661785,1.32245529160537,1.83229159388821,2.33306951925227,3.72803587852155,1.12738587736838,2.39226473670366,2.64733584731356,3.50012139019286,3.09983576346555,2.19642963138012,1.99507305697782,1.5624526181274,2.72634295506848,1.44950472495604,1.15212002503146,0.948033361884535,0.608175645870493,0.308132871494482,0.649604114888975,0,0.39736270956253,0.480781798079875,0.590758108698309,0.302899349844443,0.457240839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| ||
|short_description=p1@Peli3 | |short_description=p1@Peli3 | ||
}} | }} |
Latest revision as of 22:26, 25 September 2015
Short description: | p1@Peli3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Peli3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000120475, ENSMUST00000133254, ENSMUST00000133504, ENSMUST00000146289, NM_172835, uc008gbs.2, uc012bgq.1_5end |
EntrezGene: | Peli3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-13 | 23 |
neuron | 1.12e-10 | 33 |
neuronal stem cell | 1.12e-10 | 33 |
neuroblast | 1.12e-10 | 33 |
electrically signaling cell | 1.12e-10 | 33 |
ectodermal cell | 3.94e-10 | 44 |
neurectodermal cell | 3.94e-10 | 44 |
electrically responsive cell | 4.44e-10 | 39 |
electrically active cell | 4.44e-10 | 39 |
neural cell | 7.26e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.54e-27 | 95 |
ectoderm | 5.54e-27 | 95 |
presumptive ectoderm | 5.54e-27 | 95 |
neurectoderm | 4.59e-25 | 64 |
neural plate | 4.59e-25 | 64 |
presumptive neural plate | 4.59e-25 | 64 |
central nervous system | 1.52e-24 | 73 |
ecto-epithelium | 3.28e-24 | 73 |
regional part of nervous system | 8.01e-24 | 54 |
nervous system | 1.13e-23 | 75 |
neural tube | 2.07e-22 | 52 |
neural rod | 2.07e-22 | 52 |
future spinal cord | 2.07e-22 | 52 |
neural keel | 2.07e-22 | 52 |
pre-chordal neural plate | 1.22e-19 | 49 |
brain | 1.59e-19 | 47 |
future brain | 1.59e-19 | 47 |
regional part of brain | 6.79e-19 | 46 |
gray matter | 1.00e-18 | 34 |
anterior neural tube | 7.14e-17 | 40 |
regional part of forebrain | 3.44e-16 | 39 |
forebrain | 3.44e-16 | 39 |
future forebrain | 3.44e-16 | 39 |
brain grey matter | 4.27e-16 | 29 |
regional part of telencephalon | 4.27e-16 | 29 |
telencephalon | 4.27e-16 | 29 |
structure with developmental contribution from neural crest | 1.48e-13 | 92 |
cerebral cortex | 3.01e-11 | 21 |
cerebral hemisphere | 3.01e-11 | 21 |
pallium | 3.01e-11 | 21 |
regional part of cerebral cortex | 2.11e-09 | 17 |
anatomical conduit | 2.85e-08 | 122 |