FFCP PHASE1:Mm9::chr17:12312140..12312214,+: Difference between revisions
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{{FFCP|EntrezGene=68262|HGNC=|UniProt=Q8K4X7|association_with_transcript=0bp_to_ENSMUST00000024594,ENSMUST00000172259,NM_026644,uc008akm.1_5end|description=CAGE_peak_1_at_Agpat4_5end|id=chr17:12312140..12312214,+|ontology_enrichment_celltype=CL:0000055!1.84e-10!50;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0002319!1.42e-09!43;CL:0000393!8.46e-07!39;CL:0000211!8.46e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.28e-09,44;CL:0000133,1.28e-09,44;CL:0002319,1.42e-09,43;CL:0000393,8.46e-07,39;CL:0000211,8.46e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.18e-21!75;UBERON:0001016!5.18e-21!75;UBERON:0001017!3.53e-20!73;UBERON:0005743!3.53e-20!73;UBERON:0000955!4.53e-17!50;UBERON:0006238!4.53e-17!50;UBERON:0002616!1.04e-16!49;UBERON:0001049!1.92e-16!52;UBERON:0005068!1.92e-16!52;UBERON:0006241!1.92e-16!52;UBERON:0007135!1.92e-16!52;UBERON:0004121!4.78e-15!102;UBERON:0000924!4.78e-15!102;UBERON:0006601!4.78e-15!102;UBERON:0003080!1.18e-12!40;UBERON:0002346!1.93e-12!71;UBERON:0003075!1.93e-12!71;UBERON:0007284!1.93e-12!71;UBERON:0002780!2.63e-12!39;UBERON:0001890!2.63e-12!39;UBERON:0006240!2.63e-12!39;UBERON:0000033!2.32e-11!63;UBERON:0002020!1.65e-10!34;UBERON:0002791!1.48e-09!29;UBERON:0003528!1.48e-09!29;UBERON:0001893!1.48e-09!29;UBERON:0000025!4.54e-09!114;UBERON:0003056!6.47e-09!49;UBERON:0004111!1.81e-07!122;UBERON:0002619!1.97e-07!17;UBERON:0000956!3.61e-07!21;UBERON:0001869!3.61e-07!21;UBERON:0000203!3.61e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.18e-21,75;UBERON:0001017,3.53e-20,73;UBERON:0000073,8.66e-18,54;UBERON:0001049,1.92e-16,52;UBERON:0005068,1.92e-16,52;UBERON:0006241,1.92e-16,52;UBERON:0007135,1.92e-16,52;UBERON:0000955,3.54e-15,47;UBERON:0006238,3.54e-15,47;UBERON:0002616,7.96e-15,46;UBERON:0004121,1.69e-14,95;UBERON:0000924,1.69e-14,95;UBERON:0006601,1.69e-14,95;UBERON:0003080,1.18e-12,40;UBERON:0002780,2.63e-12,39;UBERON:0001890,2.63e-12,39;UBERON:0006240,2.63e-12,39;UBERON:0002346,4.21e-12,64;UBERON:0003075,4.21e-12,64;UBERON:0007284,4.21e-12,64;UBERON:0010371,1.48e-10,73;UBERON:0002020,1.65e-10,34;UBERON:0003528,1.48e-09,29;UBERON:0002791,1.48e-09,29;UBERON:0001893,1.48e-09,29;UBERON:0000025,4.55e-09,114;UBERON:0003056,6.47e-09,49;UBERON:0010314,1.17e-07,92;UBERON:0004111,1.81e-07,122;UBERON:0002619,1.97e-07,17;UBERON:0000956,3.61e-07,21;UBERON:0001869,3.61e-07,21;UBERON:0000203,3.61e-07,21|phase1_expression=24.1824759128239,6.2815573375085,5.91499011206397,3.62957053568196,3.00537437967808,8.39396359559449,9.57811826441655,17.4316486646128,16.1907030474417,42.3656792642808,3.4243593645101,6.78063351460359,5.82082481766099,7.34331380319578,41.9718299887735,51.0237673822361,93.7412916691716,17.192688012024,17.9619908023518,14.8536378129311,26.1082900763784,0.297872853602656,1.30599894569468,11.1994695955385,15.3704218315004,6.31655160526522,11.630573896295,8.61884930743556,35.1543325994292,25.2030129759931,23.9468951507729,45.7222084890934,33.2134985295668,47.5445043046316,12.7094712690561,13.4650062740379,8.16677425049476,5.4409111995798,9.37602413428561,8.89990364755457,17.0587131528994,10.2456822743767,7.76816564849846,42.5531244757451,39.6383801068302,55.7982126571512,55.5497854487108,52.1080123749267,96.4422342204331,72.3279224556334,55.994568650145,110.689474561028,22.8184344238521,4.35217285206807,20.8378155468328,54.0244815675489,53.2952198286088,28.8776371675368,36.6192794155872,49.1961610722991,40.5652098243955,79.9673095683152,64.9185201161132,20.2477436388315,30.6548572395762,31.2611250576284,59.0212217721257,119.107674649682,26.0260926894279,31.1863717546205,24.1873705554089,44.5615535669934,55.438003778855,32.7050433903927,31.9165418490727,41.3648453974509,95.8008164694682,73.9309687513237,78.1857254274279,41.5441806350111,44.2800195035663,39.068502791757,85.1508146954212,78.2240027944035,79.3022905961644,39.1856018679978,38.725097177356,29.0783135487469,46.4201565132418,53.2779498752838,35.943196599008,7.74381489283248,0,1.61910957491345,1.94932925234301,0.448026887097336,12.2186645514624,41.9258593542022,40.5266167180475,45.2274655373235,31.8306128695298,28.2318250311499,7.64415719119937,0,4.32982082022428,5.82727690592727,4.54972000513305,13.1311461676919,17.6077760880077,48.8374637523274,24.9818870543236,37.7537193107055,36.4372485664572,35.4198205298663,34.9238460193043,12.8179923156269,30.404981031328,10.2665543413137,26.5383165584962,27.3385976411122,31.5803371398363,43.1538975290348,74.5567044872489,30.1564220921894,39.1665341741161,15.3274233125155,9.22576458695586,2.99951365496704,5.84523044536098,48.3823765277577,41.632554856495,26.7643770000401,55.7976067817207,47.0516441487808,59.2195926994746,69.1147780668648,20.3678727700633,31.2261496231333,4.0435641349388,6.10281382070775,28.6264974517948,21.6107978167465,21.9675798362526,23.3592467645358,17.009124787832,18.7046031615881,14.9922759295566,13.9699820199068,26.9459991166053,28.5550181053407,24.4572062587889,21.70037751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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68262 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4X7 | |||
|association_with_transcript=0bp_to_ENSMUST00000024594,ENSMUST00000172259,NM_026644,uc008akm.1_5end | |||
|cluster_id=chr17:12312140..12312214,+ | |||
|description=CAGE_peak_1_at_Agpat4_5end | |||
|id=chr17:12312140..12312214,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-10!50;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0002319!1.42e-09!43;CL:0000393!8.46e-07!39;CL:0000211!8.46e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.28e-09,44;CL:0000133,1.28e-09,44;CL:0002319,1.42e-09,43;CL:0000393,8.46e-07,39;CL:0000211,8.46e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.18e-21!75;UBERON:0001016!5.18e-21!75;UBERON:0001017!3.53e-20!73;UBERON:0005743!3.53e-20!73;UBERON:0000955!4.53e-17!50;UBERON:0006238!4.53e-17!50;UBERON:0002616!1.04e-16!49;UBERON:0001049!1.92e-16!52;UBERON:0005068!1.92e-16!52;UBERON:0006241!1.92e-16!52;UBERON:0007135!1.92e-16!52;UBERON:0004121!4.78e-15!102;UBERON:0000924!4.78e-15!102;UBERON:0006601!4.78e-15!102;UBERON:0003080!1.18e-12!40;UBERON:0002346!1.93e-12!71;UBERON:0003075!1.93e-12!71;UBERON:0007284!1.93e-12!71;UBERON:0002780!2.63e-12!39;UBERON:0001890!2.63e-12!39;UBERON:0006240!2.63e-12!39;UBERON:0000033!2.32e-11!63;UBERON:0002020!1.65e-10!34;UBERON:0002791!1.48e-09!29;UBERON:0003528!1.48e-09!29;UBERON:0001893!1.48e-09!29;UBERON:0000025!4.54e-09!114;UBERON:0003056!6.47e-09!49;UBERON:0004111!1.81e-07!122;UBERON:0002619!1.97e-07!17;UBERON:0000956!3.61e-07!21;UBERON:0001869!3.61e-07!21;UBERON:0000203!3.61e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.18e-21,75;UBERON:0001017,3.53e-20,73;UBERON:0000073,8.66e-18,54;UBERON:0001049,1.92e-16,52;UBERON:0005068,1.92e-16,52;UBERON:0006241,1.92e-16,52;UBERON:0007135,1.92e-16,52;UBERON:0000955,3.54e-15,47;UBERON:0006238,3.54e-15,47;UBERON:0002616,7.96e-15,46;UBERON:0004121,1.69e-14,95;UBERON:0000924,1.69e-14,95;UBERON:0006601,1.69e-14,95;UBERON:0003080,1.18e-12,40;UBERON:0002780,2.63e-12,39;UBERON:0001890,2.63e-12,39;UBERON:0006240,2.63e-12,39;UBERON:0002346,4.21e-12,64;UBERON:0003075,4.21e-12,64;UBERON:0007284,4.21e-12,64;UBERON:0010371,1.48e-10,73;UBERON:0002020,1.65e-10,34;UBERON:0003528,1.48e-09,29;UBERON:0002791,1.48e-09,29;UBERON:0001893,1.48e-09,29;UBERON:0000025,4.55e-09,114;UBERON:0003056,6.47e-09,49;UBERON:0010314,1.17e-07,92;UBERON:0004111,1.81e-07,122;UBERON:0002619,1.97e-07,17;UBERON:0000956,3.61e-07,21;UBERON:0001869,3.61e-07,21;UBERON:0000203,3.61e-07,21 | |||
|phase1_expression=24.1824759128239,6.2815573375085,5.91499011206397,3.62957053568196,3.00537437967808,8.39396359559449,9.57811826441655,17.4316486646128,16.1907030474417,42.3656792642808,3.4243593645101,6.78063351460359,5.82082481766099,7.34331380319578,41.9718299887735,51.0237673822361,93.7412916691716,17.192688012024,17.9619908023518,14.8536378129311,26.1082900763784,0.297872853602656,1.30599894569468,11.1994695955385,15.3704218315004,6.31655160526522,11.630573896295,8.61884930743556,35.1543325994292,25.2030129759931,23.9468951507729,45.7222084890934,33.2134985295668,47.5445043046316,12.7094712690561,13.4650062740379,8.16677425049476,5.4409111995798,9.37602413428561,8.89990364755457,17.0587131528994,10.2456822743767,7.76816564849846,42.5531244757451,39.6383801068302,55.7982126571512,55.5497854487108,52.1080123749267,96.4422342204331,72.3279224556334,55.994568650145,110.689474561028,22.8184344238521,4.35217285206807,20.8378155468328,54.0244815675489,53.2952198286088,28.8776371675368,36.6192794155872,49.1961610722991,40.5652098243955,79.9673095683152,64.9185201161132,20.2477436388315,30.6548572395762,31.2611250576284,59.0212217721257,119.107674649682,26.0260926894279,31.1863717546205,24.1873705554089,44.5615535669934,55.438003778855,32.7050433903927,31.9165418490727,41.3648453974509,95.8008164694682,73.9309687513237,78.1857254274279,41.5441806350111,44.2800195035663,39.068502791757,85.1508146954212,78.2240027944035,79.3022905961644,39.1856018679978,38.725097177356,29.0783135487469,46.4201565132418,53.2779498752838,35.943196599008,7.74381489283248,0,1.61910957491345,1.94932925234301,0.448026887097336,12.2186645514624,41.9258593542022,40.5266167180475,45.2274655373235,31.8306128695298,28.2318250311499,7.64415719119937,0,4.32982082022428,5.82727690592727,4.54972000513305,13.1311461676919,17.6077760880077,48.8374637523274,24.9818870543236,37.7537193107055,36.4372485664572,35.4198205298663,34.9238460193043,12.8179923156269,30.404981031328,10.2665543413137,26.5383165584962,27.3385976411122,31.5803371398363,43.1538975290348,74.5567044872489,30.1564220921894,39.1665341741161,15.3274233125155,9.22576458695586,2.99951365496704,5.84523044536098,48.3823765277577,41.632554856495,26.7643770000401,55.7976067817207,47.0516441487808,59.2195926994746,69.1147780668648,20.3678727700633,31.2261496231333,4.0435641349388,6.10281382070775,28.6264974517948,21.6107978167465,21.9675798362526,23.3592467645358,17.009124787832,18.7046031615881,14.9922759295566,13.9699820199068,26.9459991166053,28.5550181053407,24.4572062587889,21.7003775103299,51.7167883559612,45.2727816478817,54.9438304209209,22.6899064173082,4.21327912387941,3.60287069960601,3.40996199274711,23.4052122965117,24.1561841780529,17.1058958387964,18.2293446400612,13.5767319905709,15.2724441758504,11.1616293480196,16.6329508867764,11.6765342367169,11.5191894939436,14.9392392311977,11.5928397650574,8.62579925809461,13.173006917463,11.8101648509127,59.512055443648,29.3278145280961,1.32167513193519,5.28901133327089,29.4337785738623,22.9914305141834,17.2682398171605,12.5043785266472,12.2307924114679,11.9842144450912,9.49058123089023,10.3760341476127,10.0534083520108,10.9426059622633,9.55324026883689,8.08937467788799,22.2622191370935,22.9012464242522,20.2944654019797,26.3914064128474,34.9393980586549,22.4016460629846,21.7226785627741,24.4774011417212,16.4414996523069,10.1851002105925,9.89091985400661,7.77402132707343,2.96452627087149,36.8727683632568,36.5599730910558,50.5939752865921,51.7293309540682,58.8472269795897,40.9947621368086,35.6743210439005,25.4552306036806,19.7684217495419,20.1275489138296,12.6527922207291,7.48890415474945,3.03094653536534,1.97337154874103,3.37710464954357,54.8716974794816,26.3393062360974,30.4744505946588,34.7977425839136,34.9688469949868,39.8664892711521,44.0380735639125,44.1002044158625,69.9900039831488,82.1633998596955,67.768276679432,73.0830383632191,58.5402088525386,57.8596234326046,27.142431109069,15.7732648307426,2.95058563811422,5.51873492609465,72.8899678544576,85.5645312123083,22.9508923527346,11.6136626514012,25.2406575533005,23.8167634020949,28.8667352961951,27.4814117645435,29.1866263047936,25.7599643017838,23.4790206971439,25.4262596382841,31.2277344577754,47.5555548304274,22.710413633323,15.313641915384,20.1979829598434,37.283247791793,3.98235415019888,25.977528068583,14.2092071773433,10.5618844663303,8.85905678642318,15.9866276930842,13.1798429515793,10.9060118843252,11.0514187299264,10.7452497698177,5.27093042874994,6.18813259489121,59.5769310069129,35.2919744301368,31.3048014754266,37.5089811305287,41.8522951395766,39.5978775076597,43.2763924183578,50.8456465021381,33.5580542531106,47.0267197317681,6.83638033970382,24.5680516882805,53.6061896630406,31.5436597374255,28.0525008407371,17.7272171724666,9.61886760878507,68.7927870458991,48.3564592657923,18.3684312487268,31.2978751254813,93.9958600453408,78.1890982564264,58.5672123408698,24.4768939191152,17.3539800881336,22.5265957301211,69.6909551151033,27.6793994383493,24.3983360552218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| |||
|short_description=p1@Agpat4 | |||
}} |
Latest revision as of 22:56, 25 September 2015
Short description: | p1@Agpat4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agpat4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000024594, ENSMUST00000172259, NM_026644, uc008akm.1_5end |
EntrezGene: | Agpat4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.28e-09 | 44 |
neurectodermal cell | 1.28e-09 | 44 |
neural cell | 1.42e-09 | 43 |
electrically responsive cell | 8.46e-07 | 39 |
electrically active cell | 8.46e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.18e-21 | 75 |
central nervous system | 3.53e-20 | 73 |
regional part of nervous system | 8.66e-18 | 54 |
neural tube | 1.92e-16 | 52 |
neural rod | 1.92e-16 | 52 |
future spinal cord | 1.92e-16 | 52 |
neural keel | 1.92e-16 | 52 |
brain | 3.54e-15 | 47 |
future brain | 3.54e-15 | 47 |
regional part of brain | 7.96e-15 | 46 |
ectoderm-derived structure | 1.69e-14 | 95 |
ectoderm | 1.69e-14 | 95 |
presumptive ectoderm | 1.69e-14 | 95 |
anterior neural tube | 1.18e-12 | 40 |
regional part of forebrain | 2.63e-12 | 39 |
forebrain | 2.63e-12 | 39 |
future forebrain | 2.63e-12 | 39 |
neurectoderm | 4.21e-12 | 64 |
neural plate | 4.21e-12 | 64 |
presumptive neural plate | 4.21e-12 | 64 |
ecto-epithelium | 1.48e-10 | 73 |
gray matter | 1.65e-10 | 34 |
brain grey matter | 1.48e-09 | 29 |
regional part of telencephalon | 1.48e-09 | 29 |
telencephalon | 1.48e-09 | 29 |
tube | 4.55e-09 | 114 |
pre-chordal neural plate | 6.47e-09 | 49 |
structure with developmental contribution from neural crest | 1.17e-07 | 92 |
anatomical conduit | 1.81e-07 | 122 |
regional part of cerebral cortex | 1.97e-07 | 17 |
cerebral cortex | 3.61e-07 | 21 |
cerebral hemisphere | 3.61e-07 | 21 |
pallium | 3.61e-07 | 21 |