FFCP PHASE1:Mm9::chr8:89996670..89996681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100040294 | |EntrezGene=100040294 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENSMUST00000123808,ENSMUST00000146810,NR_033430,uc009mqs.1_5end | |association_with_transcript=-29bp_to_ENSMUST00000123808,ENSMUST00000146810,NR_033430,uc009mqs.1_5end | ||
|cluster_id=chr8:89996670..89996681,+ | |||
|description=CAGE_peak_2_at_Gm2694_5end | |description=CAGE_peak_2_at_Gm2694_5end | ||
|id=chr8:89996670..89996681,+ | |id=chr8:89996670..89996681,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.34e-13!23;CL:0000337!1.34e-13!23;CL:0000540!1.21e-10!33;CL:0000047!1.21e-10!33;CL:0000031!1.21e-10!33;CL:0000404!1.21e-10!33;CL:0000393!6.45e-08!39;CL:0000211!6.45e-08!39;CL:0000221!4.24e-07!44;CL:0000133!4.24e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.34e-13!23;CL:0000337!1.34e-13!23;CL:0000540!1.21e-10!33;CL:0000047!1.21e-10!33;CL:0000031!1.21e-10!33;CL:0000404!1.21e-10!33;CL:0000393!6.45e-08!39;CL:0000211!6.45e-08!39;CL:0000221!4.24e-07!44;CL:0000133!4.24e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.64e-10,23;CL:0000337,5.64e-10,23;CL:0002613,6.14e-08,3;CL:0000120,1.53e-07,3;CL:0000540,9.92e-07,33;CL:0000047,9.92e-07,33;CL:0000031,9.92e-07,33;CL:0000404,9.92e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.61e-19!63;UBERON:0001017!3.92e-18!73;UBERON:0005743!3.92e-18!73;UBERON:0001049!8.64e-18!52;UBERON:0005068!8.64e-18!52;UBERON:0006241!8.64e-18!52;UBERON:0007135!8.64e-18!52;UBERON:0000073!3.07e-17!75;UBERON:0001016!3.07e-17!75;UBERON:0002346!6.17e-17!71;UBERON:0003075!6.17e-17!71;UBERON:0007284!6.17e-17!71;UBERON:0000955!1.62e-16!50;UBERON:0006238!1.62e-16!50;UBERON:0002616!9.70e-16!49;UBERON:0004121!1.30e-15!102;UBERON:0000924!1.30e-15!102;UBERON:0006601!1.30e-15!102;UBERON:0003056!3.03e-15!49;UBERON:0003080!2.27e-13!40;UBERON:0002780!7.35e-13!39;UBERON:0001890!7.35e-13!39;UBERON:0006240!7.35e-13!39;UBERON:0007811!1.72e-11!86;UBERON:0001894!2.81e-10!10;UBERON:0006222!2.81e-10!10;UBERON:0000153!4.40e-10!94;UBERON:0000007!3.05e-09!8;UBERON:0003296!3.05e-09!8;UBERON:0010133!3.05e-09!8;UBERON:0002020!1.50e-07!34;UBERON:0000473!1.82e-07!14;UBERON:0003135!9.36e-07!15 | |ontology_enrichment_uberon=UBERON:0000033!4.61e-19!63;UBERON:0001017!3.92e-18!73;UBERON:0005743!3.92e-18!73;UBERON:0001049!8.64e-18!52;UBERON:0005068!8.64e-18!52;UBERON:0006241!8.64e-18!52;UBERON:0007135!8.64e-18!52;UBERON:0000073!3.07e-17!75;UBERON:0001016!3.07e-17!75;UBERON:0002346!6.17e-17!71;UBERON:0003075!6.17e-17!71;UBERON:0007284!6.17e-17!71;UBERON:0000955!1.62e-16!50;UBERON:0006238!1.62e-16!50;UBERON:0002616!9.70e-16!49;UBERON:0004121!1.30e-15!102;UBERON:0000924!1.30e-15!102;UBERON:0006601!1.30e-15!102;UBERON:0003056!3.03e-15!49;UBERON:0003080!2.27e-13!40;UBERON:0002780!7.35e-13!39;UBERON:0001890!7.35e-13!39;UBERON:0006240!7.35e-13!39;UBERON:0007811!1.72e-11!86;UBERON:0001894!2.81e-10!10;UBERON:0006222!2.81e-10!10;UBERON:0000153!4.40e-10!94;UBERON:0000007!3.05e-09!8;UBERON:0003296!3.05e-09!8;UBERON:0010133!3.05e-09!8;UBERON:0002020!1.50e-07!34;UBERON:0000473!1.82e-07!14;UBERON:0003135!9.36e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.33e-10,52;UBERON:0005068,4.33e-10,52;UBERON:0006241,4.33e-10,52;UBERON:0007135,4.33e-10,52;UBERON:0000007,5.71e-10,8;UBERON:0003296,5.71e-10,8;UBERON:0010133,5.71e-10,8;UBERON:0001017,1.12e-09,73;UBERON:0000073,1.18e-09,54;UBERON:0002616,1.63e-09,46;UBERON:0001016,2.30e-09,75;UBERON:0000955,2.79e-09,47;UBERON:0006238,2.79e-09,47;UBERON:0001894,5.22e-08,10;UBERON:0006222,5.22e-08,10;UBERON:0002346,6.91e-08,64;UBERON:0003075,6.91e-08,64;UBERON:0007284,6.91e-08,64;UBERON:0002780,3.68e-07,39;UBERON:0001890,3.68e-07,39;UBERON:0006240,3.68e-07,39;UBERON:0004121,5.78e-07,95;UBERON:0000924,5.78e-07,95;UBERON:0006601,5.78e-07,95;UBERON:0003080,5.88e-07,40 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.05162480675691,0.285650984403804,0,0.857435594504678,0.191690942036473,0,0,0.255374676170375,0.614426133024974,2.76961204233407,1.9212405156506,0.52091337055676,0.558365998002762,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,7.61230072230023,12.5668024088073,0,0,0,0,0.299581278809645,0,0.125654352112864,0,1.02286182932132,0.41557608911912,0.324482526135515,0,0,0,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0.544291993210623,0.384341160854549,0.562210347358373,0,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.720244376125241,0.776152102696527,1.07168517515796,1.59606210278046,1.24858172321449,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,1.69107881605257,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,1.01373675294467,0.938857909166032,0.781226309063701,0.943734099831398,0.724752362478018,1.15212002503146,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0.269141569828427,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0.341467211508268,0,0.419226325255965,0,0,0,0.64183841918363,0.505394423527595,0,0,0.187283014939765,0,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0,0.214871054048298,0,0,0 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.05162480675691,0.285650984403804,0,0.857435594504678,0.191690942036473,0,0,0.255374676170375,0.614426133024974,2.76961204233407,1.9212405156506,0.52091337055676,0.558365998002762,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,7.61230072230023,12.5668024088073,0,0,0,0,0.299581278809645,0,0.125654352112864,0,1.02286182932132,0.41557608911912,0.324482526135515,0,0,0,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0.544291993210623,0.384341160854549,0.562210347358373,0,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.720244376125241,0.776152102696527,1.07168517515796,1.59606210278046,1.24858172321449,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,1.69107881605257,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,1.01373675294467,0.938857909166032,0.781226309063701,0.943734099831398,0.724752362478018,1.15212002503146,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0.269141569828427,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0.341467211508268,0,0.419226325255965,0,0,0,0.64183841918363,0.505394423527595,0,0,0.187283014939765,0,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Gm2694 | |short_description=p2@Gm2694 | ||
}} | }} |
Latest revision as of 22:59, 25 September 2015
Short description: | p2@Gm2694 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm2694_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -29bp_to_ENSMUST00000123808, ENSMUST00000146810, NR_033430, uc009mqs.1_5end |
EntrezGene: | Gm2694 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.64e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.64e-10 | 23 |
striatum neuron | 6.14e-08 | 3 |
granule cell | 1.53e-07 | 3 |
neuron | 9.92e-07 | 33 |
neuronal stem cell | 9.92e-07 | 33 |
neuroblast | 9.92e-07 | 33 |
electrically signaling cell | 9.92e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.33e-10 | 52 |
neural rod | 4.33e-10 | 52 |
future spinal cord | 4.33e-10 | 52 |
neural keel | 4.33e-10 | 52 |
pituitary gland | 5.71e-10 | 8 |
gland of diencephalon | 5.71e-10 | 8 |
neuroendocrine gland | 5.71e-10 | 8 |
central nervous system | 1.12e-09 | 73 |
regional part of nervous system | 1.18e-09 | 54 |
regional part of brain | 1.63e-09 | 46 |
nervous system | 2.30e-09 | 75 |
brain | 2.79e-09 | 47 |
future brain | 2.79e-09 | 47 |
diencephalon | 5.22e-08 | 10 |
future diencephalon | 5.22e-08 | 10 |
neurectoderm | 6.91e-08 | 64 |
neural plate | 6.91e-08 | 64 |
presumptive neural plate | 6.91e-08 | 64 |
regional part of forebrain | 3.68e-07 | 39 |
forebrain | 3.68e-07 | 39 |
future forebrain | 3.68e-07 | 39 |
ectoderm-derived structure | 5.78e-07 | 95 |
ectoderm | 5.78e-07 | 95 |
presumptive ectoderm | 5.78e-07 | 95 |
anterior neural tube | 5.88e-07 | 40 |