FFCP PHASE1:Mm9::chr19:5424822..5424845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66556 | |EntrezGene=66556 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1420 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENSMUST00000126908_5end | |association_with_transcript=-35bp_to_ENSMUST00000126908_5end | ||
|cluster_id=chr19:5424822..5424845,- | |||
|description=CAGE_peak_3_at_Drap1_5end | |description=CAGE_peak_3_at_Drap1_5end | ||
|id=chr19:5424822..5424845,- | |id=chr19:5424822..5424845,- | ||
|ontology_enrichment_celltype=CL:0000055!8.41e-14!50;CL:0000117!1.68e-12!23;CL:0000337!1.68e-12!23;CL:0002319!6.38e-12!43;CL:0000221!6.67e-12!44;CL:0000133!6.67e-12!44;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0002321!4.84e-09!70;CL:0000220!4.84e-09!70;CL:0000540!3.25e-08!33;CL:0000047!3.25e-08!33;CL:0000031!3.25e-08!33;CL:0000404!3.25e-08!33 | |ontology_enrichment_celltype=CL:0000055!8.41e-14!50;CL:0000117!1.68e-12!23;CL:0000337!1.68e-12!23;CL:0002319!6.38e-12!43;CL:0000221!6.67e-12!44;CL:0000133!6.67e-12!44;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0002321!4.84e-09!70;CL:0000220!4.84e-09!70;CL:0000540!3.25e-08!33;CL:0000047!3.25e-08!33;CL:0000031!3.25e-08!33;CL:0000404!3.25e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-12,23;CL:0000337,1.66e-12,23;CL:0002319,6.32e-12,43;CL:0000221,6.60e-12,44;CL:0000133,6.60e-12,44;CL:0000393,1.37e-09,39;CL:0000211,1.37e-09,39;CL:0002321,5.68e-09,70;CL:0000540,3.23e-08,33;CL:0000047,3.23e-08,33;CL:0000031,3.23e-08,33;CL:0000404,3.23e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.10e-20!73;UBERON:0005743!3.10e-20!73;UBERON:0000073!8.35e-20!75;UBERON:0001016!8.35e-20!75;UBERON:0001049!1.13e-17!52;UBERON:0005068!1.13e-17!52;UBERON:0006241!1.13e-17!52;UBERON:0007135!1.13e-17!52;UBERON:0000955!5.75e-17!50;UBERON:0006238!5.75e-17!50;UBERON:0002616!2.17e-16!49;UBERON:0002020!9.30e-15!34;UBERON:0004121!4.13e-14!102;UBERON:0000924!4.13e-14!102;UBERON:0006601!4.13e-14!102;UBERON:0000033!3.60e-13!63;UBERON:0002346!6.15e-13!71;UBERON:0003075!6.15e-13!71;UBERON:0007284!6.15e-13!71;UBERON:0003080!1.98e-12!40;UBERON:0002791!2.41e-12!29;UBERON:0003528!2.41e-12!29;UBERON:0001893!2.41e-12!29;UBERON:0002780!4.84e-12!39;UBERON:0001890!4.84e-12!39;UBERON:0006240!4.84e-12!39;UBERON:0003056!1.94e-09!49;UBERON:0007811!2.53e-08!86;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0000153!6.13e-08!94;UBERON:0000025!4.96e-07!114;UBERON:0004111!5.77e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!3.10e-20!73;UBERON:0005743!3.10e-20!73;UBERON:0000073!8.35e-20!75;UBERON:0001016!8.35e-20!75;UBERON:0001049!1.13e-17!52;UBERON:0005068!1.13e-17!52;UBERON:0006241!1.13e-17!52;UBERON:0007135!1.13e-17!52;UBERON:0000955!5.75e-17!50;UBERON:0006238!5.75e-17!50;UBERON:0002616!2.17e-16!49;UBERON:0002020!9.30e-15!34;UBERON:0004121!4.13e-14!102;UBERON:0000924!4.13e-14!102;UBERON:0006601!4.13e-14!102;UBERON:0000033!3.60e-13!63;UBERON:0002346!6.15e-13!71;UBERON:0003075!6.15e-13!71;UBERON:0007284!6.15e-13!71;UBERON:0003080!1.98e-12!40;UBERON:0002791!2.41e-12!29;UBERON:0003528!2.41e-12!29;UBERON:0001893!2.41e-12!29;UBERON:0002780!4.84e-12!39;UBERON:0001890!4.84e-12!39;UBERON:0006240!4.84e-12!39;UBERON:0003056!1.94e-09!49;UBERON:0007811!2.53e-08!86;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0000153!6.13e-08!94;UBERON:0000025!4.96e-07!114;UBERON:0004111!5.77e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.04e-20,73;UBERON:0001016,8.20e-20,75;UBERON:0000073,6.27e-19,54;UBERON:0001049,1.11e-17,52;UBERON:0005068,1.11e-17,52;UBERON:0006241,1.11e-17,52;UBERON:0007135,1.11e-17,52;UBERON:0000955,2.71e-15,47;UBERON:0006238,2.71e-15,47;UBERON:0010314,4.96e-15,92;UBERON:0002020,9.18e-15,34;UBERON:0002616,9.87e-15,46;UBERON:0004121,2.20e-14,95;UBERON:0000924,2.20e-14,95;UBERON:0006601,2.20e-14,95;UBERON:0002346,1.58e-13,64;UBERON:0003075,1.58e-13,64;UBERON:0007284,1.58e-13,64;UBERON:0003080,1.96e-12,40;UBERON:0003528,2.38e-12,29;UBERON:0002791,2.38e-12,29;UBERON:0001893,2.38e-12,29;UBERON:0010371,4.56e-12,73;UBERON:0002780,4.79e-12,39;UBERON:0001890,4.79e-12,39;UBERON:0006240,4.79e-12,39;UBERON:0003056,1.92e-09,49;UBERON:0000956,4.17e-08,21;UBERON:0001869,4.17e-08,21;UBERON:0000203,4.17e-08,21;UBERON:0000025,5.09e-07,114;UBERON:0004111,5.89e-07,122 | |||
|phase1_expression=4.32401887182944,2.79180326111489,1.81999695755814,1.51232105653415,1.50268718983904,3.18970616632591,2.80335168714631,1.29123323441576,0.703943610758334,1.17032263160997,3.5955773327356,3.19088635981346,1.71200729931206,1.31130603628496,1.66554880907831,1.82227740650843,2.09868563438444,1.10411757875383,0,2.54633791078818,4.25216450755349,2.28369187762036,1.30599894569468,2.55987876469451,2.52350209173887,0.57423196411502,3.01533397311352,2.80112602491656,2.47030445293286,2.77233142735924,3.54768817048488,3.17515336729816,2.46025915033828,0,1.73310971850765,0.997407872150954,1.02084678131185,0,0,0,0,0.683045484958446,0,2.7697299954627,4.1564541800001,4.03802854755699,12.5182615095686,14.8257106338704,10.5449367712546,11.2769341463084,12.738764367908,7.18762821824858,1.34226084846189,3.62681071005672,2.01656279485478,7.71778308107841,6.01720223871389,7.73508138416164,7.08107613008592,6.87688273053643,10.775133859605,14.2314703469035,13.3394219416671,15.2982951937838,12.8552627133707,14.209602298922,13.4820049733282,19.9793518767208,5.28817022773236,9.72042755988173,8.41299845405528,14.8538511889978,13.9147180799517,7.4719387521122,6.80502844229478,14.7075005857603,6.60695285996332,15.7055425844781,13.2101618600369,5.53922408466814,10.5210790142771,9.89735404057844,18.1468949350898,12.380777420697,13.9046405476897,7.36571463684169,6.26435395516053,5.21918448310842,2.57469057332826,2.79614772395106,0.869593466105033,6.88339101585109,1.3599426674155,4.85732872474035,1.94932925234301,1.79210754838934,4.91555470461132,9.20323741921512,23.6405264188611,18.0203183000274,3.23939865486365,3.84979432242953,12.7402619853323,49.7746692207332,2.59789249213457,4.81383744402687,7.07734223020697,3.31133251185274,1.03575153458869,5.19547486726887,2.4287945747259,2.13125834818499,3.68984795609694,2.56228488939458,2.23418543557839,4.77533047052767,1.97755974187499,1.87979163995885,1.76922110389975,3.23533699894818,3.3126227769059,2.90925151881133,0,5.5628351432194,3.14170060220183,1.27728527604296,1.67741174308288,2.99951365496704,2.66847476853436,6.44099749440738,17.3850229071078,7.79056983099759,11.1247564923057,6.13717097592793,10.1816141834184,7.94982189032012,3.46253837091075,2.11491850037158,2.52722758433675,2.73574412652416,2.08192708740326,3.67843367093557,3.78130472591233,2.26057226753573,2.17716797284249,1.92170580427275,2.24884138943349,1.81092359517311,4.095791865724,2.64748512234947,4.22282697993477,4.60311038097907,2.50242524303038,2.43776516565517,2.46938563689532,1.59227413454795,0.702213187313235,3.86021860672073,2.84163499395593,4.97101854085205,1.64168241986767,3.06105504483725,3.78791576936336,3.93528463494808,2.77680803197281,2.32533944750408,3.48755421819505,3.15266424391358,4.27855609775049,2.95501435342371,2.99954595319666,2.92399974850665,3.07370161407471,4.96563749413376,14.5100064509248,5.55684906848136,0.991256348951394,2.3800550999719,2.55945900642281,2.55460339046482,2.57734922644187,2.01683524623343,1.77902435075896,1.52180500890047,0.949058123089023,1.4822905925161,0.754005626400808,2.98434708061726,1.75467678407208,2.69645822596266,0.648414149624083,1.1948476395262,4.1726938209678,3.31320686568214,3.38123207019241,2.24016460629846,2.32742984601151,2.24434623649019,1.96033265085198,2.21415221969403,2.35498091762062,1.1105744752962,4.15033677922008,1.83529616287703,1.76903095601883,2.47348323623339,2.23146133527353,1.4470629585145,0.763877555344259,1.72617682470486,1.78348749452539,1.92192989231657,0,1.48856379067401,2.49630138491648,2.02063102357689,2.33216637578486,1.4473305640901,3.51031061316549,2.4633883530163,2.93336957595647,2.37643120085263,2.11221223459652,2.01007508930179,2.61848004974615,2.92700471786698,2.04925687338048,1.55025282754142,2.55127629851979,1.96635977658886,2.59027472798843,1.73578870297814,10.5553898757491,5.4390568381871,2.45882136509518,2.48343071674259,6.58257418949947,7.14991288212439,4.75411341592359,4.54447668967871,3.47059041357882,2.34263246577983,2.15423397732799,2.15071918157297,4.23317480756549,2.54768877709949,2.02405350837447,1.75353514746787,1.58115111178609,11.5675673911851,2.41298144854057,3.20518086601059,2.93196526836437,2.3095817216155,5.30980553359851,2.18502572539483,3.32555912661226,2.26326095707078,2.65771703592696,3.99665692327106,1.29214146584111,1.45413491791002,1.42598951353889,1.58018378967908,1.05418608574999,0,3.74483566329167,2.16073312837572,2.71653235943784,4.28674070063185,3.54680467284547,4.45922044005176,3.45552943264454,1.522324745573,2.58138878870081,2.33015277950202,2.42581237860458,4.61681508236144,1.93757312035087,3.19658502119226,1.90995750405018,1.80554989719567,0.874442509889552,7.41701208042039,0.854354403989263,2.88941615148511,1.11116716421827,2.44878994106098,2.46049609897845,0.228778173206523,0.169978429993855,2.51912614182584,1.65839968565309,0.954670618015114,4.9032079005076,3.45643094115643,3.02414954301044,2.29997125615916,3.05707589244649,2.56242258131159,1.81837602595739,1.04702376793612,1.4257647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|phase1_expression=4.32401887182944,2.79180326111489,1.81999695755814,1.51232105653415,1.50268718983904,3.18970616632591,2.80335168714631,1.29123323441576,0.703943610758334,1.17032263160997,3.5955773327356,3.19088635981346,1.71200729931206,1.31130603628496,1.66554880907831,1.82227740650843,2.09868563438444,1.10411757875383,0,2.54633791078818,4.25216450755349,2.28369187762036,1.30599894569468,2.55987876469451,2.52350209173887,0.57423196411502,3.01533397311352,2.80112602491656,2.47030445293286,2.77233142735924,3.54768817048488,3.17515336729816,2.46025915033828,0,1.73310971850765,0.997407872150954,1.02084678131185,0,0,0,0,0.683045484958446,0,2.7697299954627,4.1564541800001,4.03802854755699,12.5182615095686,14.8257106338704,10.5449367712546,11.2769341463084,12.738764367908,7.18762821824858,1.34226084846189,3.62681071005672,2.01656279485478,7.71778308107841,6.01720223871389,7.73508138416164,7.08107613008592,6.87688273053643,10.775133859605,14.2314703469035,13.3394219416671,15.2982951937838,12.8552627133707,14.209602298922,13.4820049733282,19.9793518767208,5.28817022773236,9.72042755988173,8.41299845405528,14.8538511889978,13.9147180799517,7.4719387521122,6.80502844229478,14.7075005857603,6.60695285996332,15.7055425844781,13.2101618600369,5.53922408466814,10.5210790142771,9.89735404057844,18.1468949350898,12.380777420697,13.9046405476897,7.36571463684169,6.26435395516053,5.21918448310842,2.57469057332826,2.79614772395106,0.869593466105033,6.88339101585109,1.3599426674155,4.85732872474035,1.94932925234301,1.79210754838934,4.91555470461132,9.20323741921512,23.6405264188611,18.0203183000274,3.23939865486365,3.84979432242953,12.7402619853323,49.7746692207332,2.59789249213457,4.81383744402687,7.07734223020697,3.31133251185274,1.03575153458869,5.19547486726887,2.4287945747259,2.13125834818499,3.68984795609694,2.56228488939458,2.23418543557839,4.77533047052767,1.97755974187499,1.87979163995885,1.76922110389975,3.23533699894818,3.3126227769059,2.90925151881133,0,5.5628351432194,3.14170060220183,1.27728527604296,1.67741174308288,2.99951365496704,2.66847476853436,6.44099749440738,17.3850229071078,7.79056983099759,11.1247564923057,6.13717097592793,10.1816141834184,7.94982189032012,3.46253837091075,2.11491850037158,2.52722758433675,2.73574412652416,2.08192708740326,3.67843367093557,3.78130472591233,2.26057226753573,2.17716797284249,1.92170580427275,2.24884138943349,1.81092359517311,4.095791865724,2.64748512234947,4.22282697993477,4.60311038097907,2.50242524303038,2.43776516565517,2.46938563689532,1.59227413454795,0.702213187313235,3.86021860672073,2.84163499395593,4.97101854085205,1.64168241986767,3.06105504483725,3.78791576936336,3.93528463494808,2.77680803197281,2.32533944750408,3.48755421819505,3.15266424391358,4.27855609775049,2.95501435342371,2.99954595319666,2.92399974850665,3.07370161407471,4.96563749413376,14.5100064509248,5.55684906848136,0.991256348951394,2.3800550999719,2.55945900642281,2.55460339046482,2.57734922644187,2.01683524623343,1.77902435075896,1.52180500890047,0.949058123089023,1.4822905925161,0.754005626400808,2.98434708061726,1.75467678407208,2.69645822596266,0.648414149624083,1.1948476395262,4.1726938209678,3.31320686568214,3.38123207019241,2.24016460629846,2.32742984601151,2.24434623649019,1.96033265085198,2.21415221969403,2.35498091762062,1.1105744752962,4.15033677922008,1.83529616287703,1.76903095601883,2.47348323623339,2.23146133527353,1.4470629585145,0.763877555344259,1.72617682470486,1.78348749452539,1.92192989231657,0,1.48856379067401,2.49630138491648,2.02063102357689,2.33216637578486,1.4473305640901,3.51031061316549,2.4633883530163,2.93336957595647,2.37643120085263,2.11221223459652,2.01007508930179,2.61848004974615,2.92700471786698,2.04925687338048,1.55025282754142,2.55127629851979,1.96635977658886,2.59027472798843,1.73578870297814,10.5553898757491,5.4390568381871,2.45882136509518,2.48343071674259,6.58257418949947,7.14991288212439,4.75411341592359,4.54447668967871,3.47059041357882,2.34263246577983,2.15423397732799,2.15071918157297,4.23317480756549,2.54768877709949,2.02405350837447,1.75353514746787,1.58115111178609,11.5675673911851,2.41298144854057,3.20518086601059,2.93196526836437,2.3095817216155,5.30980553359851,2.18502572539483,3.32555912661226,2.26326095707078,2.65771703592696,3.99665692327106,1.29214146584111,1.45413491791002,1.42598951353889,1.58018378967908,1.05418608574999,0,3.74483566329167,2.16073312837572,2.71653235943784,4.28674070063185,3.54680467284547,4.45922044005176,3.45552943264454,1.522324745573,2.58138878870081,2.33015277950202,2.42581237860458,4.61681508236144,1.93757312035087,3.19658502119226,1.90995750405018,1.80554989719567,0.874442509889552,7.41701208042039,0.854354403989263,2.88941615148511,1.11116716421827,2.44878994106098,2.46049609897845,0.228778173206523,0.169978429993855,2.51912614182584,1.65839968565309,0.954670618015114,4.9032079005076,3.45643094115643,3.02414954301044,2.29997125615916,3.05707589244649,2.56242258131159,1.81837602595739,1.04702376793612,1.4257647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| ||
|short_description=p3@Drap1 | |short_description=p3@Drap1 | ||
}} | }} |
Latest revision as of 23:28, 25 September 2015
Short description: | p3@Drap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Drap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1420 |
Association with transcript: | -35bp_to_ENSMUST00000126908_5end |
EntrezGene: | Drap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.66e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-12 | 23 |
neural cell | 6.32e-12 | 43 |
ectodermal cell | 6.60e-12 | 44 |
neurectodermal cell | 6.60e-12 | 44 |
electrically responsive cell | 1.37e-09 | 39 |
electrically active cell | 1.37e-09 | 39 |
embryonic cell | 5.68e-09 | 70 |
neuron | 3.23e-08 | 33 |
neuronal stem cell | 3.23e-08 | 33 |
neuroblast | 3.23e-08 | 33 |
electrically signaling cell | 3.23e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.04e-20 | 73 |
nervous system | 8.20e-20 | 75 |
regional part of nervous system | 6.27e-19 | 54 |
neural tube | 1.11e-17 | 52 |
neural rod | 1.11e-17 | 52 |
future spinal cord | 1.11e-17 | 52 |
neural keel | 1.11e-17 | 52 |
brain | 2.71e-15 | 47 |
future brain | 2.71e-15 | 47 |
structure with developmental contribution from neural crest | 4.96e-15 | 92 |
gray matter | 9.18e-15 | 34 |
regional part of brain | 9.87e-15 | 46 |
ectoderm-derived structure | 2.20e-14 | 95 |
ectoderm | 2.20e-14 | 95 |
presumptive ectoderm | 2.20e-14 | 95 |
neurectoderm | 1.58e-13 | 64 |
neural plate | 1.58e-13 | 64 |
presumptive neural plate | 1.58e-13 | 64 |
anterior neural tube | 1.96e-12 | 40 |
brain grey matter | 2.38e-12 | 29 |
regional part of telencephalon | 2.38e-12 | 29 |
telencephalon | 2.38e-12 | 29 |
ecto-epithelium | 4.56e-12 | 73 |
regional part of forebrain | 4.79e-12 | 39 |
forebrain | 4.79e-12 | 39 |
future forebrain | 4.79e-12 | 39 |
pre-chordal neural plate | 1.92e-09 | 49 |
cerebral cortex | 4.17e-08 | 21 |
cerebral hemisphere | 4.17e-08 | 21 |
pallium | 4.17e-08 | 21 |
tube | 5.09e-07 | 114 |
anatomical conduit | 5.89e-07 | 122 |