FFCP PHASE1:Mm9::chr2:157249871..157249886,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:157249871..157249886,+ to FFCP PHASE1:Mm9::chr2:157249871..157249886,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20779 | |EntrezGene=20779 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENSMUST00000145715_5end | |||
|cluster_id=chr2:157249871..157249886,+ | |||
|description=CAGE_peak_3_at_Src_5end | |||
|id=chr2:157249871..157249886,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.11e-16!49;UBERON:0003080!4.86e-14!40;UBERON:0001017!1.22e-13!73;UBERON:0005743!1.22e-13!73;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000033!3.02e-13!63;UBERON:0002346!7.61e-13!71;UBERON:0003075!7.61e-13!71;UBERON:0007284!7.61e-13!71;UBERON:0000073!1.21e-12!75;UBERON:0001016!1.21e-12!75;UBERON:0000955!1.27e-12!50;UBERON:0006238!1.27e-12!50;UBERON:0002616!5.19e-12!49;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0002020!1.69e-10!34;UBERON:0000468!2.91e-10!333;UBERON:0002791!3.66e-10!29;UBERON:0003528!3.66e-10!29;UBERON:0001893!3.66e-10!29;UBERON:0000922!8.35e-09!328;UBERON:0000956!2.33e-08!21;UBERON:0001869!2.33e-08!21;UBERON:0000203!2.33e-08!21;UBERON:0000153!5.98e-07!94;UBERON:0002619!7.22e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.18e-18,49;UBERON:0003080,8.07e-16,40;UBERON:0002780,4.59e-15,39;UBERON:0001890,4.59e-15,39;UBERON:0006240,4.59e-15,39;UBERON:0002346,4.61e-15,64;UBERON:0003075,4.61e-15,64;UBERON:0007284,4.61e-15,64;UBERON:0000955,2.11e-13,47;UBERON:0006238,2.11e-13,47;UBERON:0000073,5.98e-13,54;UBERON:0001017,9.56e-13,73;UBERON:0002616,1.16e-12,46;UBERON:0004121,3.22e-12,95;UBERON:0000924,3.22e-12,95;UBERON:0006601,3.22e-12,95;UBERON:0001016,6.48e-12,75;UBERON:0010371,7.92e-12,73;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0003528,3.20e-11,29;UBERON:0002791,3.20e-11,29;UBERON:0001893,3.20e-11,29;UBERON:0002020,2.82e-10,34;UBERON:0000956,4.22e-09,21;UBERON:0001869,4.22e-09,21;UBERON:0000203,4.22e-09,21;UBERON:0002021,3.20e-08,10;UBERON:0000411,3.20e-08,10;UBERON:0001950,3.20e-08,10;UBERON:0002619,3.05e-07,17;UBERON:0010314,8.95e-07,92 | |||
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|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,1.81478526784098,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.799962113967033,0.91763712426868,1.72269589234506,0,0.430942465371778,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,0.436050312760893,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,1.82084814773638,1.05798195854407,1.90149421051854,1.0165335962074,0,1.7997994345628,0,0,0.898800331555214,2.30530983192933,1.45165457231869,1.62007125998029,2.73422449756797,2.57085885963423,0.883474163806454,1.83736198822431,1.0543001812006,0.919218786610021,3.30347642998166,1.0214987046815,1.22885226604995,1.71452174049252,1.55528994124096,1.04182674111352,2.23346399201105,0.56276261003168,1.98637722109853,1.76777151284201,0.996601765593721,0.745597783301202,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.985903938436763,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,0.11418387971906,0,0.148442139064825,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,0.23517741427141,0.628332956648377,2.22475470960936,0.144599356919912,0.884610551949874,0.808834249737046,0.220841518460394,0,0,0.585561594023094,0.209446706813455,1.02182822083437,0,0,0,2.84602214869163,1.37250180845588,5.27748278874031,2.08589184230732,1.79000820131231,0.62336413367868,1.78465389374533,1.32391173005411,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,1.50704817835715,2.58538696775046,2.69038812598185,1.96773621575431,1.03481348295606,1.72454394346274,2.64748512234947,2.28736461413134,1.31517439456545,2.50242524303038,1.0447564995665,0.823128545631774,2.38841120182192,0,0,0,0.414251545071004,1.40715635988658,0,1.42046841351126,0.787056926989615,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0,0.324275238183423,0.292399974850665,0,0.536825675041487,5.25724871410318,2.36680608472354,3.30418782983798,0.528901133327089,1.49301775374664,2.32236671860439,1.9330119198314,0.80673409849337,2.2237804384487,2.09248188723815,0.949058123089023,1.15289268306808,1.00534083520108,0.994782360205754,0.58489226135736,1.79763881730844,0.432276099749388,0.398282546508734,0.379335801906163,1.37098215131675,1.1270773567308,0.814605311381257,0.775809948670503,0.98190147846446,1.07502113111237,1.03327103585722,0.156998727841375,0.863780147452604,0,0.667380422864376,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0.538192240565737,0,1.10851914099963,1.32643988239339,1.46668478797823,2.54617628662782,0.234690248288502,2.01007508930179,1.6663054862021,1.56106918286239,0.472905432318573,1.10732344824387,2.87018583583477,0.655453258862952,1.03610989119537,1.3018415272336,0,0.54390568381871,0.491764273019036,1.93155722413313,1.28440471990234,0.703270119553219,0.327869890753351,0,2.2085575359138,0.780877488593277,2.80050417052639,1.43381278771531,0.891194696329576,1.13230612315533,0.809621403349789,0.876767573733936,1.18586333383957,4.81981974632711,0.851640511249612,1.95872164033981,0.977321756121456,0.989820737835213,1.32745138339963,2.18502572539483,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0.712994756769443,0.948110273807448,0,0,1.36175842301515,2.16073312837572,2.45781499187234,3.00071849044229,2.30542303734956,2.14042581122485,1.31639216481697,1.8267896946876,0.469343416127421,0.63549621259146,0.882113592219848,0,0,0.542816324353403,0.716234064018819,0.656563598980245,0.874442509889552,0.556275906031529,0,0.82554747185289,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0.509935289981566,0.279902904647316,0.138199973804424,1.90934123603023,2.68885594543965,2.03319467126849,1.18805874903981,0.627264888043406,1.31017538247707,1.21377911746339,1.07449492442937,0.523511883968059,0.90730481304255,0,0,1.79419855252775,1.15820943319968,1.94451188344048,1.93739735216597,1.35164900392623,1.17357238645754,1.8228613878153,1.04859344425711,0.241584120826006,0.288030006257865,0,1.01362607645082,0.924398614483445,1.16928740680016,1.07416017400489,0.79472541912506,0.480781798079875,0.886137163047463,0.504832249740738,0.15241361331,0.201652370273681,0.584747284438515,0.481059208201647,0.467507608726276,0.453460767230423,0,0.717710852875806,0.335769232728157,2.12508553435409,1.50145980360946,1.64836461840539,1.2862102744744,1.50471631210609,2.82375921308533,1.84130094602871,3.43737308063638,3.26521046453006,4.11049511862385,5.2877572817279,3.37511250115903,1.80128481289688,1.35942722695261,3.10656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| ||
|short_description=p3@Src | |||
}} | }} |
Latest revision as of 00:42, 26 September 2015
Short description: | p3@Src |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Src_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000145715_5end |
EntrezGene: | Src |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.18e-18 | 49 |
anterior neural tube | 8.07e-16 | 40 |
regional part of forebrain | 4.59e-15 | 39 |
forebrain | 4.59e-15 | 39 |
future forebrain | 4.59e-15 | 39 |
neurectoderm | 4.61e-15 | 64 |
neural plate | 4.61e-15 | 64 |
presumptive neural plate | 4.61e-15 | 64 |
brain | 2.11e-13 | 47 |
future brain | 2.11e-13 | 47 |
regional part of nervous system | 5.98e-13 | 54 |
central nervous system | 9.56e-13 | 73 |
regional part of brain | 1.16e-12 | 46 |
ectoderm-derived structure | 3.22e-12 | 95 |
ectoderm | 3.22e-12 | 95 |
presumptive ectoderm | 3.22e-12 | 95 |
nervous system | 6.48e-12 | 75 |
ecto-epithelium | 7.92e-12 | 73 |
neural tube | 1.55e-11 | 52 |
neural rod | 1.55e-11 | 52 |
future spinal cord | 1.55e-11 | 52 |
neural keel | 1.55e-11 | 52 |
brain grey matter | 3.20e-11 | 29 |
regional part of telencephalon | 3.20e-11 | 29 |
telencephalon | 3.20e-11 | 29 |
gray matter | 2.82e-10 | 34 |
cerebral cortex | 4.22e-09 | 21 |
cerebral hemisphere | 4.22e-09 | 21 |
pallium | 4.22e-09 | 21 |
occipital lobe | 3.20e-08 | 10 |
visual cortex | 3.20e-08 | 10 |
neocortex | 3.20e-08 | 10 |
regional part of cerebral cortex | 3.05e-07 | 17 |
structure with developmental contribution from neural crest | 8.95e-07 | 92 |