FFCP PHASE1:Mm9::chr2:157249871..157249886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20779 | |EntrezGene=20779 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENSMUST00000145715_5end | |association_with_transcript=19bp_to_ENSMUST00000145715_5end | ||
|cluster_id=chr2:157249871..157249886,+ | |||
|description=CAGE_peak_3_at_Src_5end | |description=CAGE_peak_3_at_Src_5end | ||
|id=chr2:157249871..157249886,+ | |id=chr2:157249871..157249886,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.11e-16!49;UBERON:0003080!4.86e-14!40;UBERON:0001017!1.22e-13!73;UBERON:0005743!1.22e-13!73;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000033!3.02e-13!63;UBERON:0002346!7.61e-13!71;UBERON:0003075!7.61e-13!71;UBERON:0007284!7.61e-13!71;UBERON:0000073!1.21e-12!75;UBERON:0001016!1.21e-12!75;UBERON:0000955!1.27e-12!50;UBERON:0006238!1.27e-12!50;UBERON:0002616!5.19e-12!49;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0002020!1.69e-10!34;UBERON:0000468!2.91e-10!333;UBERON:0002791!3.66e-10!29;UBERON:0003528!3.66e-10!29;UBERON:0001893!3.66e-10!29;UBERON:0000922!8.35e-09!328;UBERON:0000956!2.33e-08!21;UBERON:0001869!2.33e-08!21;UBERON:0000203!2.33e-08!21;UBERON:0000153!5.98e-07!94;UBERON:0002619!7.22e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.18e-18,49;UBERON:0003080,8.07e-16,40;UBERON:0002780,4.59e-15,39;UBERON:0001890,4.59e-15,39;UBERON:0006240,4.59e-15,39;UBERON:0002346,4.61e-15,64;UBERON:0003075,4.61e-15,64;UBERON:0007284,4.61e-15,64;UBERON:0000955,2.11e-13,47;UBERON:0006238,2.11e-13,47;UBERON:0000073,5.98e-13,54;UBERON:0001017,9.56e-13,73;UBERON:0002616,1.16e-12,46;UBERON:0004121,3.22e-12,95;UBERON:0000924,3.22e-12,95;UBERON:0006601,3.22e-12,95;UBERON:0001016,6.48e-12,75;UBERON:0010371,7.92e-12,73;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0003528,3.20e-11,29;UBERON:0002791,3.20e-11,29;UBERON:0001893,3.20e-11,29;UBERON:0002020,2.82e-10,34;UBERON:0000956,4.22e-09,21;UBERON:0001869,4.22e-09,21;UBERON:0000203,4.22e-09,21;UBERON:0002021,3.20e-08,10;UBERON:0000411,3.20e-08,10;UBERON:0001950,3.20e-08,10;UBERON:0002619,3.05e-07,17;UBERON:0010314,8.95e-07,92 | |||
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| ||
|short_description=p3@Src | |short_description=p3@Src | ||
}} | }} |
Latest revision as of 00:42, 26 September 2015
Short description: | p3@Src |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Src_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000145715_5end |
EntrezGene: | Src |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.18e-18 | 49 |
anterior neural tube | 8.07e-16 | 40 |
regional part of forebrain | 4.59e-15 | 39 |
forebrain | 4.59e-15 | 39 |
future forebrain | 4.59e-15 | 39 |
neurectoderm | 4.61e-15 | 64 |
neural plate | 4.61e-15 | 64 |
presumptive neural plate | 4.61e-15 | 64 |
brain | 2.11e-13 | 47 |
future brain | 2.11e-13 | 47 |
regional part of nervous system | 5.98e-13 | 54 |
central nervous system | 9.56e-13 | 73 |
regional part of brain | 1.16e-12 | 46 |
ectoderm-derived structure | 3.22e-12 | 95 |
ectoderm | 3.22e-12 | 95 |
presumptive ectoderm | 3.22e-12 | 95 |
nervous system | 6.48e-12 | 75 |
ecto-epithelium | 7.92e-12 | 73 |
neural tube | 1.55e-11 | 52 |
neural rod | 1.55e-11 | 52 |
future spinal cord | 1.55e-11 | 52 |
neural keel | 1.55e-11 | 52 |
brain grey matter | 3.20e-11 | 29 |
regional part of telencephalon | 3.20e-11 | 29 |
telencephalon | 3.20e-11 | 29 |
gray matter | 2.82e-10 | 34 |
cerebral cortex | 4.22e-09 | 21 |
cerebral hemisphere | 4.22e-09 | 21 |
pallium | 4.22e-09 | 21 |
occipital lobe | 3.20e-08 | 10 |
visual cortex | 3.20e-08 | 10 |
neocortex | 3.20e-08 | 10 |
regional part of cerebral cortex | 3.05e-07 | 17 |
structure with developmental contribution from neural crest | 8.95e-07 | 92 |