FFCP PHASE1:Mm9::chr17:23877268..23877326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76498 | |EntrezGene=76498 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3081 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJE4 | |UniProt=Q9JJE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000024702,NM_023824,uc008atb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000024702,NM_023824,uc008atb.1_5end | ||
|cluster_id=chr17:23877268..23877326,- | |||
|description=CAGE_peak_1_at_Paqr4_5end | |description=CAGE_peak_1_at_Paqr4_5end | ||
|id=chr17:23877268..23877326,- | |id=chr17:23877268..23877326,- | ||
|ontology_enrichment_celltype=CL:0000221!2.36e-10!44;CL:0000133!2.36e-10!44;CL:0002319!4.72e-10!43;CL:0000055!7.07e-09!50;CL:0002321!7.11e-08!70;CL:0000220!7.11e-08!70;CL:0000333!5.63e-07!10;CL:0000095!5.63e-07!10;CL:0000243!5.63e-07!10;CL:0000123!5.63e-07!10;CL:0000125!5.63e-07!10;CL:0000030!5.63e-07!10;CL:0000339!5.63e-07!10 | |ontology_enrichment_celltype=CL:0000221!2.36e-10!44;CL:0000133!2.36e-10!44;CL:0002319!4.72e-10!43;CL:0000055!7.07e-09!50;CL:0002321!7.11e-08!70;CL:0000220!7.11e-08!70;CL:0000333!5.63e-07!10;CL:0000095!5.63e-07!10;CL:0000243!5.63e-07!10;CL:0000123!5.63e-07!10;CL:0000125!5.63e-07!10;CL:0000030!5.63e-07!10;CL:0000339!5.63e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.27e-10,44;CL:0000133,2.27e-10,44;CL:0002319,4.55e-10,43;CL:0002321,5.40e-08,70;CL:0000333,5.50e-07,10;CL:0000095,5.50e-07,10;CL:0000243,5.50e-07,10;CL:0000123,5.50e-07,10;CL:0000125,5.50e-07,10;CL:0000030,5.50e-07,10;CL:0000339,5.50e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.69e-18!102;UBERON:0000924!1.69e-18!102;UBERON:0006601!1.69e-18!102;UBERON:0000073!2.12e-16!75;UBERON:0001016!2.12e-16!75;UBERON:0001017!1.29e-15!73;UBERON:0005743!1.29e-15!73;UBERON:0002346!2.83e-10!71;UBERON:0003075!2.83e-10!71;UBERON:0007284!2.83e-10!71;UBERON:0000033!6.83e-10!63;UBERON:0001049!1.13e-09!52;UBERON:0005068!1.13e-09!52;UBERON:0006241!1.13e-09!52;UBERON:0007135!1.13e-09!52;UBERON:0000955!6.59e-09!50;UBERON:0006238!6.59e-09!50;UBERON:0002616!1.16e-08!49;UBERON:0002020!6.31e-08!34;UBERON:0003076!2.12e-07!12;UBERON:0003057!2.12e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.50e-18,95;UBERON:0000924,1.50e-18,95;UBERON:0006601,1.50e-18,95;UBERON:0001016,1.99e-16,75;UBERON:0001017,1.21e-15,73;UBERON:0010371,4.83e-11,73;UBERON:0000073,1.04e-10,54;UBERON:0002346,2.31e-10,64;UBERON:0003075,2.31e-10,64;UBERON:0007284,2.31e-10,64;UBERON:0001049,1.09e-09,52;UBERON:0005068,1.09e-09,52;UBERON:0006241,1.09e-09,52;UBERON:0007135,1.09e-09,52;UBERON:0010314,3.37e-09,92;UBERON:0011216,5.83e-08,194;UBERON:0002020,6.14e-08,34;UBERON:0000955,1.81e-07,47;UBERON:0006238,1.81e-07,47;UBERON:0003076,2.06e-07,12;UBERON:0003057,2.06e-07,12;UBERON:0002616,3.11e-07,46 | |||
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| ||
|short_description=p1@Paqr4 | |short_description=p1@Paqr4 | ||
}} | }} |
Latest revision as of 00:58, 26 September 2015
Short description: | p1@Paqr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Paqr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3081 |
Association with transcript: | 0bp_to_ENSMUST00000024702, NM_023824, uc008atb.1_5end |
EntrezGene: | Paqr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.27e-10 | 44 |
neurectodermal cell | 2.27e-10 | 44 |
neural cell | 4.55e-10 | 43 |
embryonic cell | 5.40e-08 | 70 |
migratory neural crest cell | 5.50e-07 | 10 |
neuron associated cell | 5.50e-07 | 10 |
glial cell (sensu Vertebrata) | 5.50e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.50e-07 | 10 |
glial cell | 5.50e-07 | 10 |
glioblast | 5.50e-07 | 10 |
glioblast (sensu Vertebrata) | 5.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.50e-18 | 95 |
ectoderm | 1.50e-18 | 95 |
presumptive ectoderm | 1.50e-18 | 95 |
nervous system | 1.99e-16 | 75 |
central nervous system | 1.21e-15 | 73 |
ecto-epithelium | 4.83e-11 | 73 |
regional part of nervous system | 1.04e-10 | 54 |
neurectoderm | 2.31e-10 | 64 |
neural plate | 2.31e-10 | 64 |
presumptive neural plate | 2.31e-10 | 64 |
neural tube | 1.09e-09 | 52 |
neural rod | 1.09e-09 | 52 |
future spinal cord | 1.09e-09 | 52 |
neural keel | 1.09e-09 | 52 |
structure with developmental contribution from neural crest | 3.37e-09 | 92 |
organ system subdivision | 5.83e-08 | 194 |
gray matter | 6.14e-08 | 34 |
brain | 1.81e-07 | 47 |
future brain | 1.81e-07 | 47 |
posterior neural tube | 2.06e-07 | 12 |
chordal neural plate | 2.06e-07 | 12 |
regional part of brain | 3.11e-07 | 46 |