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FFCP PHASE1:Mm9::chr2:163744698..163744715,-: Difference between revisions

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{{FFCP|EntrezGene=241770|HGNC=|MCL_coexpression_id=1|UniProt=P60191,A2A5N0,A4FUQ0|association_with_transcript=-279bp_to_ENSMUST00000044734,NM_183023,uc008nto.1_5end|description=CAGE_peak_1_at_Rims4_5end|id=chr2:163744698..163744715,-|ontology_enrichment_celltype=CL:0000117!2.09e-09!23;CL:0000337!2.09e-09!23;CL:0000540!6.23e-09!33;CL:0000047!6.23e-09!33;CL:0000031!6.23e-09!33;CL:0000404!6.23e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23;CL:0000540,9.32e-07,33;CL:0000047,9.32e-07,33;CL:0000031,9.32e-07,33;CL:0000404,9.32e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.99e-22!71;UBERON:0003075!9.99e-22!71;UBERON:0007284!9.99e-22!71;UBERON:0001017!7.10e-18!73;UBERON:0005743!7.10e-18!73;UBERON:0001049!2.64e-17!52;UBERON:0005068!2.64e-17!52;UBERON:0006241!2.64e-17!52;UBERON:0007135!2.64e-17!52;UBERON:0000073!7.53e-17!75;UBERON:0001016!7.53e-17!75;UBERON:0004121!2.07e-16!102;UBERON:0000924!2.07e-16!102;UBERON:0006601!2.07e-16!102;UBERON:0000955!5.68e-16!50;UBERON:0006238!5.68e-16!50;UBERON:0002616!2.26e-15!49;UBERON:0000033!9.20e-15!63;UBERON:0002020!1.60e-14!34;UBERON:0003080!1.53e-13!40;UBERON:0003056!2.41e-13!49;UBERON:0002780!5.40e-13!39;UBERON:0001890!5.40e-13!39;UBERON:0006240!5.40e-13!39;UBERON:0002791!5.42e-12!29;UBERON:0003528!5.42e-12!29;UBERON:0001893!5.42e-12!29;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10;UBERON:0000956!3.31e-08!21;UBERON:0001869!3.31e-08!21;UBERON:0000203!3.31e-08!21;UBERON:0000468!6.20e-08!333;UBERON:0002619!1.89e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.56e-21,54;UBERON:0001049,4.45e-20,52;UBERON:0005068,4.45e-20,52;UBERON:0006241,4.45e-20,52;UBERON:0007135,4.45e-20,52;UBERON:0002020,2.72e-18,34;UBERON:0001017,1.07e-17,73;UBERON:0002346,3.04e-17,64;UBERON:0003075,3.04e-17,64;UBERON:0007284,3.04e-17,64;UBERON:0000955,6.97e-17,47;UBERON:0006238,6.97e-17,47;UBERON:0001016,9.65e-17,75;UBERON:0002616,4.05e-16,46;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0003080,2.34e-14,40;UBERON:0002780,1.16e-13,39;UBERON:0001890,1.16e-13,39;UBERON:0006240,1.16e-13,39;UBERON:0010314,2.17e-13,92;UBERON:0003056,2.59e-13,49;UBERON:0010371,4.08e-13,73;UBERON:0004121,2.12e-12,95;UBERON:0000924,2.12e-12,95;UBERON:0006601,2.12e-12,95;UBERON:0002021,9.47e-11,10;UBERON:0000411,9.47e-11,10;UBERON:0001950,9.47e-11,10;UBERON:0002619,2.11e-10,17;UBERON:0000956,8.58e-10,21;UBERON:0001869,8.58e-10,21;UBERON:0000203,8.58e-10,21;UBERON:0002369,1.01e-07,7;UBERON:0006858,1.01e-07,7|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.72138528483423,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.933206510776299,0.810035629990144,1.68259969081106,13.9968982357864,9.718215801871,1.95985278743926,1.15014565221884,4.5960939330501,1.10115880999389,6.76742891851495,6.75868746327471,10.1552441552249,8.69132614222892,3.64639359389732,9.21303896704557,7.31591393041184,6.41752640662602,5.30331453852602,10.3931326983345,5.96478226640962,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,23.0085315550478,14.5727674483554,20.3991870469135,26.5207821844467,19.5939432718409,23.4001527200053,37.8256439902323,0,0.86759614151947,0,0.161766849947409,0,0,0,22.5441213698891,34.5587066242201,0,0,0,0,11.9832511523858,7.77751024791665,9.80103946480342,22.7709859451882,21.9915293304084,13.9217989854905,14.1149898868949,0.509196819251581,0.248813941220186,0,1.05220927943237,0,0.689706313300419,0.360124259610698,0.452114453507145,1.7009124787832,1.15302348256365,1.59292931751539,1.55222022443409,0,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0,6.30869845692382,7.61494131606705,0,0,0.213288250535234,0.464473343720877,0.644337306610467,1.21010114774006,0.22237804384487,0.951128130562796,0.949058123089023,1.31759163779209,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,1.82797620175566,0,0.610953983535943,0.581857461502877,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,1.01430060694251,1.92941727801933,0.763877555344259,3.45235364940973,0.486405680325106,1.37280706594041,5.75072826109418,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,8.99083303931635,12.5416504653657,0,0.757412781613119,0.631016438832513,0.390438744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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241770
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P60191,A2A5N0,A4FUQ0
|association_with_transcript=-279bp_to_ENSMUST00000044734,NM_183023,uc008nto.1_5end
|cluster_id=chr2:163744698..163744715,-
|description=CAGE_peak_1_at_Rims4_5end
|id=chr2:163744698..163744715,-
|ontology_enrichment_celltype=CL:0000117!2.09e-09!23;CL:0000337!2.09e-09!23;CL:0000540!6.23e-09!33;CL:0000047!6.23e-09!33;CL:0000031!6.23e-09!33;CL:0000404!6.23e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23;CL:0000540,9.32e-07,33;CL:0000047,9.32e-07,33;CL:0000031,9.32e-07,33;CL:0000404,9.32e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.99e-22!71;UBERON:0003075!9.99e-22!71;UBERON:0007284!9.99e-22!71;UBERON:0001017!7.10e-18!73;UBERON:0005743!7.10e-18!73;UBERON:0001049!2.64e-17!52;UBERON:0005068!2.64e-17!52;UBERON:0006241!2.64e-17!52;UBERON:0007135!2.64e-17!52;UBERON:0000073!7.53e-17!75;UBERON:0001016!7.53e-17!75;UBERON:0004121!2.07e-16!102;UBERON:0000924!2.07e-16!102;UBERON:0006601!2.07e-16!102;UBERON:0000955!5.68e-16!50;UBERON:0006238!5.68e-16!50;UBERON:0002616!2.26e-15!49;UBERON:0000033!9.20e-15!63;UBERON:0002020!1.60e-14!34;UBERON:0003080!1.53e-13!40;UBERON:0003056!2.41e-13!49;UBERON:0002780!5.40e-13!39;UBERON:0001890!5.40e-13!39;UBERON:0006240!5.40e-13!39;UBERON:0002791!5.42e-12!29;UBERON:0003528!5.42e-12!29;UBERON:0001893!5.42e-12!29;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10;UBERON:0000956!3.31e-08!21;UBERON:0001869!3.31e-08!21;UBERON:0000203!3.31e-08!21;UBERON:0000468!6.20e-08!333;UBERON:0002619!1.89e-07!17
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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.72138528483423,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.933206510776299,0.810035629990144,1.68259969081106,13.9968982357864,9.718215801871,1.95985278743926,1.15014565221884,4.5960939330501,1.10115880999389,6.76742891851495,6.75868746327471,10.1552441552249,8.69132614222892,3.64639359389732,9.21303896704557,7.31591393041184,6.41752640662602,5.30331453852602,10.3931326983345,5.96478226640962,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,23.0085315550478,14.5727674483554,20.3991870469135,26.5207821844467,19.5939432718409,23.4001527200053,37.8256439902323,0,0.86759614151947,0,0.161766849947409,0,0,0,22.5441213698891,34.5587066242201,0,0,0,0,11.9832511523858,7.77751024791665,9.80103946480342,22.7709859451882,21.9915293304084,13.9217989854905,14.1149898868949,0.509196819251581,0.248813941220186,0,1.05220927943237,0,0.689706313300419,0.360124259610698,0.452114453507145,1.7009124787832,1.15302348256365,1.59292931751539,1.55222022443409,0,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0,6.30869845692382,7.61494131606705,0,0,0.213288250535234,0.464473343720877,0.644337306610467,1.21010114774006,0.22237804384487,0.951128130562796,0.949058123089023,1.31759163779209,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,1.82797620175566,0,0.610953983535943,0.581857461502877,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,1.01430060694251,1.92941727801933,0.763877555344259,3.45235364940973,0.486405680325106,1.37280706594041,5.75072826109418,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,8.99083303931635,12.5416504653657,0,0.757412781613119,0.631016438832513,0.390438744296638,0.646270193198397,0.477937595905104,0.222798674082394,1.41538265394416,2.02405350837447,0.876767573733936,0.790575555893047,14.7807805554031,10.9293865610367,0.178065603667255,0.162886959353576,0.164970122972535,6.63725691699814,0.971122544619926,3.93020624054176,2.45186603682668,2.06711325016541,1.22974059177571,0.258428293168221,1.45413491791002,2.49548164869305,5.68866164284469,5.27093042874994,5.15677716240934,3.06395645178409,0.540183282093931,0.258717367565509,0.428674070063185,0.532020700926821,1.07021290561242,0.658196082408484,1.8267896946876,0.23467170806371,0,0,0,0,0.180938774784468,0,0,0,5.7481843623258,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.474503990371703,1.82987520414164,0.972048067396211,0.209088296014469,0.436725127492355,0.404593039154462,0.495920734352016,0,0,0.621339313086926,3.38215763210514,5.08356256549528,4.96375471371293,13.0282296190512,17.4365761694937,11.6579726588637,15.8432272171768,13.020438484395,7.7595914875026,3.14059357073808,2.59227005632079,0,0.608175645870493,0,0,0,0.198681354781265,0,0.295379054349154,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0.269141569828427,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,32.7556068717899,30.8417908459809,30.9363577257274,26.980949627959,21.2375581128899,18.8848474347425,21.6007200074178,27.0192721934532,24.9228324941313,28.9945774581019,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,2.09613162627982,2.94149613520023,0.888986911206461,2.06035057238894,1.92551525755089,1.76888048234658,1.01391719956096,2.07488975524684,1.68554713445788,1.53660365771686,1.55075766180156,1.42888107384922,1.50649623728312,2.31491064556446,1.64834360321323,1.91358596174717,1.02860775715625,0.887379030796687,2.14592570952589,1.45346416632329,1.2234219453993,1.01537529470012,0.73171189149109,0.526139422875686,2.44447404922551,1.68342681497322,2.84724043498018,1.47756723563345,0.818462086339379,2.01417893541756,1.92906610981141,3.49734809113124,0.935726433781634,1.50409737833809,0.956441660344217,0.882365676478062,0.231867835620421
|short_description=p1@Rims4
}}

Latest revision as of 02:20, 26 September 2015

Short description:p1@Rims4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rims4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -279bp_to_ENSMUST00000044734, NM_183023, uc008nto.1_5end
EntrezGene:Rims4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rims4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D723.01
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D620.40
adrenal gland, embryo E17.CNhs11043.1263-45I126.52
adrenal gland, embryo E18.CNhs11026.1262-18F519.59
adrenal gland, neonate N00.CNhs11191.1311-23C123.40
adrenal gland, neonate N25.CNhs11223.1377-27I337.83
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B222.54
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F19.80
cortex, adult.CNhs10473.12-14D522.77
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B214.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I710.93
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I517.44
testis, embryo E18.CNhs11027.503-18G511.66
testis, neonate N00.CNhs11189.1300-22B715.84
testis, neonate N07.CNhs11222.726-26I413.02
testis, neonate N10.CNhs11204.763-44D97.76
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.22e-1023
neuroblast (sensu Vertebrata)1.22e-1023
neuron9.32e-0733
neuronal stem cell9.32e-0733
neuroblast9.32e-0733
electrically signaling cell9.32e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.56e-2154
neural tube4.45e-2052
neural rod4.45e-2052
future spinal cord4.45e-2052
neural keel4.45e-2052
gray matter2.72e-1834
central nervous system1.07e-1773
neurectoderm3.04e-1764
neural plate3.04e-1764
presumptive neural plate3.04e-1764
brain6.97e-1747
future brain6.97e-1747
nervous system9.65e-1775
regional part of brain4.05e-1646
brain grey matter7.05e-1529
regional part of telencephalon7.05e-1529
telencephalon7.05e-1529
anterior neural tube2.34e-1440
regional part of forebrain1.16e-1339
forebrain1.16e-1339
future forebrain1.16e-1339
structure with developmental contribution from neural crest2.17e-1392
pre-chordal neural plate2.59e-1349
ecto-epithelium4.08e-1373
ectoderm-derived structure2.12e-1295
ectoderm2.12e-1295
presumptive ectoderm2.12e-1295
occipital lobe9.47e-1110
visual cortex9.47e-1110
neocortex9.47e-1110
regional part of cerebral cortex2.11e-1017
cerebral cortex8.58e-1021
cerebral hemisphere8.58e-1021
pallium8.58e-1021
adrenal gland1.01e-077
adrenal/interrenal gland1.01e-077
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