FFCP PHASE1:Mm9::chr12:101202736..101202749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217826 | |EntrezGene=217826 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R1P5 | |UniProt=Q8R1P5 | ||
|association_with_transcript=1bp_to_ENSMUST00000049788_5end | |association_with_transcript=1bp_to_ENSMUST00000049788_5end | ||
|cluster_id=chr12:101202736..101202749,+ | |||
|description=CAGE_peak_3_at_Kcnk13_5end | |description=CAGE_peak_3_at_Kcnk13_5end | ||
|id=chr12:101202736..101202749,+ | |id=chr12:101202736..101202749,+ | ||
|ontology_enrichment_celltype=CL:0000333!2.19e-07!10;CL:0000095!2.19e-07!10;CL:0000243!2.19e-07!10;CL:0000123!2.19e-07!10;CL:0000125!2.19e-07!10;CL:0000030!2.19e-07!10;CL:0000339!2.19e-07!10 | |ontology_enrichment_celltype=CL:0000333!2.19e-07!10;CL:0000095!2.19e-07!10;CL:0000243!2.19e-07!10;CL:0000123!2.19e-07!10;CL:0000125!2.19e-07!10;CL:0000030!2.19e-07!10;CL:0000339!2.19e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.64e-15,4;CL:0000766,5.64e-15,4;CL:0000234,5.64e-15,4;CL:0000576,5.64e-15,4;CL:0000235,5.64e-15,4;CL:0000864,5.64e-15,4;CL:0002009,5.64e-15,4;CL:0000040,5.64e-15,4;CL:0000559,5.64e-15,4;CL:0002610,9.58e-12,3;CL:0002614,9.58e-12,3;CL:0002092,1.13e-11,3;CL:0002540,1.13e-11,3;CL:0002476,5.38e-09,2;CL:0000473,1.33e-08,7;CL:0000557,1.33e-08,7;CL:0000878,1.17e-07,2;CL:0000129,1.17e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.15e-07!75;UBERON:0001016!1.15e-07!75;UBERON:0002298!1.83e-07!6;UBERON:0002048!4.98e-07!14;UBERON:0000117!4.98e-07!14;UBERON:0000171!4.98e-07!14;UBERON:0000170!4.98e-07!14;UBERON:0005597!4.98e-07!14;UBERON:0000118!4.98e-07!14;UBERON:0001017!9.52e-07!73;UBERON:0005743!9.52e-07!73 | |ontology_enrichment_uberon=UBERON:0000073!1.15e-07!75;UBERON:0001016!1.15e-07!75;UBERON:0002298!1.83e-07!6;UBERON:0002048!4.98e-07!14;UBERON:0000117!4.98e-07!14;UBERON:0000171!4.98e-07!14;UBERON:0000170!4.98e-07!14;UBERON:0005597!4.98e-07!14;UBERON:0000118!4.98e-07!14;UBERON:0001017!9.52e-07!73;UBERON:0005743!9.52e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,9.58e-12,3;UBERON:0009663,9.58e-12,3;UBERON:0009661,9.58e-12,3;UBERON:0000125,9.58e-12,3;UBERON:0002308,9.58e-12,3;UBERON:0004684,9.58e-12,3;UBERON:0002275,9.58e-12,3;UBERON:0002371,1.79e-10,16;UBERON:0002950,6.39e-09,4;UBERON:0001891,6.39e-09,4;UBERON:0009616,6.39e-09,4;UBERON:0010286,6.39e-09,4;UBERON:0001896,8.30e-09,2;UBERON:0002298,8.30e-09,2;UBERON:0005290,8.30e-09,2;UBERON:0010096,8.30e-09,2;UBERON:0001017,2.46e-08,73;UBERON:0001016,4.88e-08,75;UBERON:0002420,1.33e-07,8;UBERON:0007245,1.33e-07,8;UBERON:0010009,1.33e-07,8;UBERON:0010011,1.33e-07,8;UBERON:0000454,1.33e-07,8;UBERON:0001474,2.24e-07,22;UBERON:0004765,2.24e-07,22;UBERON:0001434,2.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,0.503347818173209,0,0,0,0,0,0,0,0,0.338844532069132,0,1.3498495759221,2.96659908770092,2.8419204597844,1.19840044207362,1.53687322128622,0,0,0,0,0.220868540951614,0.122490799214954,0,0,5.50579404996943,1.78762273319263,1.84327839907492,0,0,0,1.95428099300967,2.8138130501584,2.13917546887534,0,0.142371680799103,0,0.984440513331393,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,2.28750301409313,0,0.347648640384553,0.767146371990992,1.0389402227978,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.630869845692382,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.704070744865506,0.167506257441816,1.19021820443007,1.95133647857799,1.26108115284953,1.7717175171902,0.318909537314974,0.983179888294428,0.863424909329478,0.867894351489069,6.03165135757089,4.35124547054968,0,0,3.05046120976805,3.39913891117389,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0.781226309063701,0.629156066554265,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,0.503347818173209,0,0,0,0,0,0,0,0,0.338844532069132,0,1.3498495759221,2.96659908770092,2.8419204597844,1.19840044207362,1.53687322128622,0,0,0,0,0.220868540951614,0.122490799214954,0,0,5.50579404996943,1.78762273319263,1.84327839907492,0,0,0,1.95428099300967,2.8138130501584,2.13917546887534,0,0.142371680799103,0,0.984440513331393,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,2.28750301409313,0,0.347648640384553,0.767146371990992,1.0389402227978,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.630869845692382,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.704070744865506,0.167506257441816,1.19021820443007,1.95133647857799,1.26108115284953,1.7717175171902,0.318909537314974,0.983179888294428,0.863424909329478,0.867894351489069,6.03165135757089,4.35124547054968,0,0,3.05046120976805,3.39913891117389,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0.781226309063701,0.629156066554265,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p3@Kcnk13 | |short_description=p3@Kcnk13 | ||
}} | }} |
Latest revision as of 04:36, 26 September 2015
Short description: | p3@Kcnk13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnk13_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENSMUST00000049788_5end |
EntrezGene: | Kcnk13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.64e-15 | 4 |
myeloid leukocyte | 5.64e-15 | 4 |
phagocyte | 5.64e-15 | 4 |
monocyte | 5.64e-15 | 4 |
macrophage | 5.64e-15 | 4 |
tissue-resident macrophage | 5.64e-15 | 4 |
macrophage dendritic cell progenitor | 5.64e-15 | 4 |
monoblast | 5.64e-15 | 4 |
promonocyte | 5.64e-15 | 4 |
raphe nuclei neuron | 9.58e-12 | 3 |
neuron of the substantia nigra | 9.58e-12 | 3 |
bone marrow cell | 1.13e-11 | 3 |
mesenchymal stem cell of the bone marrow | 1.13e-11 | 3 |
bone marrow macrophage | 5.38e-09 | 2 |
defensive cell | 1.33e-08 | 7 |
granulocyte monocyte progenitor cell | 1.33e-08 | 7 |
central nervous system macrophage | 1.17e-07 | 2 |
microglial cell | 1.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 9.58e-12 | 3 |
telencephalic nucleus | 9.58e-12 | 3 |
midbrain nucleus | 9.58e-12 | 3 |
neural nucleus | 9.58e-12 | 3 |
nucleus of brain | 9.58e-12 | 3 |
raphe nuclei | 9.58e-12 | 3 |
reticular formation | 9.58e-12 | 3 |
bone marrow | 1.79e-10 | 16 |
regional part of midbrain | 6.39e-09 | 4 |
midbrain | 6.39e-09 | 4 |
presumptive midbrain | 6.39e-09 | 4 |
midbrain neural tube | 6.39e-09 | 4 |
medulla oblongata | 8.30e-09 | 2 |
brainstem | 8.30e-09 | 2 |
myelencephalon | 8.30e-09 | 2 |
future myelencephalon | 8.30e-09 | 2 |
central nervous system | 2.46e-08 | 73 |
nervous system | 4.88e-08 | 75 |
basal ganglion | 1.33e-07 | 8 |
nuclear complex of neuraxis | 1.33e-07 | 8 |
aggregate regional part of brain | 1.33e-07 | 8 |
collection of basal ganglia | 1.33e-07 | 8 |
cerebral subcortex | 1.33e-07 | 8 |
bone element | 2.24e-07 | 22 |
skeletal element | 2.24e-07 | 22 |
skeletal system | 2.24e-07 | 22 |