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FFCP PHASE1:Mm9::chr12:101443818..101443871,+: Difference between revisions

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{{FFCP|EntrezGene=12313,12314,12315|HGNC=|MCL_coexpression_id=1098|UniProt=|association_with_transcript=205bp_to_ENSMUST00000127300_5end|description=CAGE_peak_4_at_Calm2_5end,CAGE_peak_5_at_Calm3_5end,CAGE_peak_6_at_Calm1_5end|id=chr12:101443818..101443871,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.02e-10!52;UBERON:0005068!1.02e-10!52;UBERON:0006241!1.02e-10!52;UBERON:0007135!1.02e-10!52;UBERON:0002020!1.04e-10!34;UBERON:0000955!6.80e-10!50;UBERON:0006238!6.80e-10!50;UBERON:0002616!1.52e-09!49;UBERON:0000073!2.57e-08!75;UBERON:0001016!2.57e-08!75;UBERON:0003080!2.65e-08!40;UBERON:0002791!2.85e-08!29;UBERON:0003528!2.85e-08!29;UBERON:0001893!2.85e-08!29;UBERON:0002780!4.27e-08!39;UBERON:0001890!4.27e-08!39;UBERON:0006240!4.27e-08!39;UBERON:0002021!4.39e-08!10;UBERON:0000411!4.39e-08!10;UBERON:0001950!4.39e-08!10;UBERON:0001017!4.52e-08!73;UBERON:0005743!4.52e-08!73;UBERON:0000956!2.61e-07!21;UBERON:0001869!2.61e-07!21;UBERON:0000203!2.61e-07!21;UBERON:0002346!7.92e-07!71;UBERON:0003075!7.92e-07!71;UBERON:0007284!7.92e-07!71;UBERON:0000033!9.33e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.28e-13,54;UBERON:0002020,3.15e-12,34;UBERON:0001049,7.22e-12,52;UBERON:0005068,7.22e-12,52;UBERON:0006241,7.22e-12,52;UBERON:0007135,7.22e-12,52;UBERON:0001016,6.19e-11,75;UBERON:0001017,1.23e-10,73;UBERON:0003528,2.23e-09,29;UBERON:0002791,2.23e-09,29;UBERON:0001893,2.23e-09,29;UBERON:0002021,3.37e-09,10;UBERON:0000411,3.37e-09,10;UBERON:0001950,3.37e-09,10;UBERON:0000955,3.48e-09,47;UBERON:0006238,3.48e-09,47;UBERON:0002346,3.97e-09,64;UBERON:0003075,3.97e-09,64;UBERON:0007284,3.97e-09,64;UBERON:0002616,8.41e-09,46;UBERON:0011216,2.00e-08,194;UBERON:0003080,2.55e-08,40;UBERON:0000956,3.81e-08,21;UBERON:0001869,3.81e-08,21;UBERON:0000203,3.81e-08,21;UBERON:0002780,4.40e-08,39;UBERON:0001890,4.40e-08,39;UBERON:0006240,4.40e-08,39;UBERON:0002619,4.50e-07,17;UBERON:0000160,4.95e-07,31|phase1_expression=0,1.74487703819681,3.63999391511629,1.81478526784098,5.50985302940982,1.17515490338323,1.86890112476421,0.774739940649458,2.956563165185,0.468129052643987,0.856089841127525,0.8774937489487,0.856003649656029,1.13646523144697,0.666219523631325,1.21485160433896,0.699561878128147,1.73504190947031,1.7824876368746,1.69755860719212,2.55129870453209,1.19149141441062,0.783599367416806,4.15980299262857,2.75291137280604,1.72269589234506,1.7230479846363,3.44753972297422,11.7814520062952,5.79669298447841,2.21730510655305,0,0,0,0.577703239502549,0.831173226792462,0.816677425049476,1.67412652294763,2.3440060335714,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0.377690453926732,0.506884656097573,0.550640256485045,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,1.67782606057736,5.80289713609076,2.01656279485478,3.34437266846731,2.0057340795713,2.57836046138721,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0.449949858640699,3.9554654502679,1.4209602298922,0,0,2.90330914463737,1.4850653216486,2.3135745748652,3.42781181284564,5.07997644188711,0.734944795289724,1.82106394934649,1.83843757322004,7.70811166995721,13.2794831608595,9.06278546211836,0.527545150920775,2.47016637726506,0.52091337055676,7.81712397203867,4.50210088025344,5.50073691996516,12.0797720044204,8.39992916714707,3.35519002485541,1.81742863999642,1.36028808192214,2.02905142091174,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.448026887097336,1.40444420131752,2.72688516124892,7.53379413348319,2.47337702157238,0.845060518660083,0,0,0,3.030874574157,3.80039798212648,8.08839112023653,2.05530983494308,0.258937883647172,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,1.50722640552623,0.587943535678524,0.628332956648377,0.741584903203122,0,0.884610551949874,0.808834249737046,0.883366073841574,2.42437626567611,3.72783522436244,4.39171195517321,3.56059401582874,3.83185582812887,0.599075622529601,0.599902730993408,0.127070227073065,1.9472783122627,2.74500361691176,2.01046963380583,2.60736480288415,7.92717917724025,2.90903262383384,2.92034273521964,1.01839363850316,0.497627882440372,0.758168275301024,1.05220927943237,0.390361328888111,1.60931473103431,0.540186389416048,2.10986744970001,0.680364991513279,0.768682321709099,0.468508622798644,1.55222022443409,0.431135985865684,0.189106080167819,0.703804496655795,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,1.19420560091096,0,0.51469581422943,1.13665399758237,0.828503090142008,0.469052119962192,1.08037236876609,0.946978942340841,0.196764231747404,0.771335564436891,2.32533944750408,0.536546802799238,0.350296027101508,0.658239399653922,1.14917224855367,0.891756905004413,0.730999937126662,0.219550115291051,0.268412837520744,2.73376933133365,3.08713837137853,1.32167513193519,3.17340679996253,0.639864751605702,1.16118335930219,0.902072229254653,1.81515172161008,2.001402394603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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12313,12314,12315
|HGNC=
|MCL_coexpression_id=1098
|TSSclassifier=NA
|UniProt=
|association_with_transcript=205bp_to_ENSMUST00000127300_5end
|cluster_id=chr12:101443818..101443871,+
|description=CAGE_peak_4_at_Calm2_5end,CAGE_peak_5_at_Calm3_5end,CAGE_peak_6_at_Calm1_5end
|id=chr12:101443818..101443871,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.02e-10!52;UBERON:0005068!1.02e-10!52;UBERON:0006241!1.02e-10!52;UBERON:0007135!1.02e-10!52;UBERON:0002020!1.04e-10!34;UBERON:0000955!6.80e-10!50;UBERON:0006238!6.80e-10!50;UBERON:0002616!1.52e-09!49;UBERON:0000073!2.57e-08!75;UBERON:0001016!2.57e-08!75;UBERON:0003080!2.65e-08!40;UBERON:0002791!2.85e-08!29;UBERON:0003528!2.85e-08!29;UBERON:0001893!2.85e-08!29;UBERON:0002780!4.27e-08!39;UBERON:0001890!4.27e-08!39;UBERON:0006240!4.27e-08!39;UBERON:0002021!4.39e-08!10;UBERON:0000411!4.39e-08!10;UBERON:0001950!4.39e-08!10;UBERON:0001017!4.52e-08!73;UBERON:0005743!4.52e-08!73;UBERON:0000956!2.61e-07!21;UBERON:0001869!2.61e-07!21;UBERON:0000203!2.61e-07!21;UBERON:0002346!7.92e-07!71;UBERON:0003075!7.92e-07!71;UBERON:0007284!7.92e-07!71;UBERON:0000033!9.33e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.28e-13,54;UBERON:0002020,3.15e-12,34;UBERON:0001049,7.22e-12,52;UBERON:0005068,7.22e-12,52;UBERON:0006241,7.22e-12,52;UBERON:0007135,7.22e-12,52;UBERON:0001016,6.19e-11,75;UBERON:0001017,1.23e-10,73;UBERON:0003528,2.23e-09,29;UBERON:0002791,2.23e-09,29;UBERON:0001893,2.23e-09,29;UBERON:0002021,3.37e-09,10;UBERON:0000411,3.37e-09,10;UBERON:0001950,3.37e-09,10;UBERON:0000955,3.48e-09,47;UBERON:0006238,3.48e-09,47;UBERON:0002346,3.97e-09,64;UBERON:0003075,3.97e-09,64;UBERON:0007284,3.97e-09,64;UBERON:0002616,8.41e-09,46;UBERON:0011216,2.00e-08,194;UBERON:0003080,2.55e-08,40;UBERON:0000956,3.81e-08,21;UBERON:0001869,3.81e-08,21;UBERON:0000203,3.81e-08,21;UBERON:0002780,4.40e-08,39;UBERON:0001890,4.40e-08,39;UBERON:0006240,4.40e-08,39;UBERON:0002619,4.50e-07,17;UBERON:0000160,4.95e-07,31
|phase1_expression=0,1.74487703819681,3.63999391511629,1.81478526784098,5.50985302940982,1.17515490338323,1.86890112476421,0.774739940649458,2.956563165185,0.468129052643987,0.856089841127525,0.8774937489487,0.856003649656029,1.13646523144697,0.666219523631325,1.21485160433896,0.699561878128147,1.73504190947031,1.7824876368746,1.69755860719212,2.55129870453209,1.19149141441062,0.783599367416806,4.15980299262857,2.75291137280604,1.72269589234506,1.7230479846363,3.44753972297422,11.7814520062952,5.79669298447841,2.21730510655305,0,0,0,0.577703239502549,0.831173226792462,0.816677425049476,1.67412652294763,2.3440060335714,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0.377690453926732,0.506884656097573,0.550640256485045,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,1.67782606057736,5.80289713609076,2.01656279485478,3.34437266846731,2.0057340795713,2.57836046138721,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0.449949858640699,3.9554654502679,1.4209602298922,0,0,2.90330914463737,1.4850653216486,2.3135745748652,3.42781181284564,5.07997644188711,0.734944795289724,1.82106394934649,1.83843757322004,7.70811166995721,13.2794831608595,9.06278546211836,0.527545150920775,2.47016637726506,0.52091337055676,7.81712397203867,4.50210088025344,5.50073691996516,12.0797720044204,8.39992916714707,3.35519002485541,1.81742863999642,1.36028808192214,2.02905142091174,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.448026887097336,1.40444420131752,2.72688516124892,7.53379413348319,2.47337702157238,0.845060518660083,0,0,0,3.030874574157,3.80039798212648,8.08839112023653,2.05530983494308,0.258937883647172,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,1.50722640552623,0.587943535678524,0.628332956648377,0.741584903203122,0,0.884610551949874,0.808834249737046,0.883366073841574,2.42437626567611,3.72783522436244,4.39171195517321,3.56059401582874,3.83185582812887,0.599075622529601,0.599902730993408,0.127070227073065,1.9472783122627,2.74500361691176,2.01046963380583,2.60736480288415,7.92717917724025,2.90903262383384,2.92034273521964,1.01839363850316,0.497627882440372,0.758168275301024,1.05220927943237,0.390361328888111,1.60931473103431,0.540186389416048,2.10986744970001,0.680364991513279,0.768682321709099,0.468508622798644,1.55222022443409,0.431135985865684,0.189106080167819,0.703804496655795,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,1.19420560091096,0,0.51469581422943,1.13665399758237,0.828503090142008,0.469052119962192,1.08037236876609,0.946978942340841,0.196764231747404,0.771335564436891,2.32533944750408,0.536546802799238,0.350296027101508,0.658239399653922,1.14917224855367,0.891756905004413,0.730999937126662,0.219550115291051,0.268412837520744,2.73376933133365,3.08713837137853,1.32167513193519,3.17340679996253,0.639864751605702,1.16118335930219,0.902072229254653,1.81515172161008,2.00140239460383,2.85338439168839,6.16887780007865,2.14108641141214,2.5133520880027,1.79060824837036,1.75467678407208,6.29173586057955,15.1296634912286,6.17337947088538,0.758671603812327,0.799739588268102,0,0.610953983535943,1.35766741017338,0.631222379012867,0.69560190836683,0.442830443938806,1.09899109488962,0.987177311374404,0.296452627087149,0.500535317148282,0.786235980452812,0.674586337154561,0,0.72353147925725,0,0.863088412352432,0.648540907100142,3.29473695825698,14.3768206527355,2.60498663367952,0.624075346229121,1.76805214562978,0.358794827043824,0.482443521363367,0.739012760666419,1.51593129416388,0.814824882210129,0.848725428875941,1.64283173801951,0.670025029767263,0.952174563544055,1.56106918286239,0.788175720530955,1.99318220683897,0.956728611944923,3.27726629431476,2.76295970985433,1.88043776155965,7.53956419696361,7.61467957346193,0.491764273019036,0.551873492609465,1.76605648986571,2.81308047821288,1.47541450839008,1.00988370881749,0,0.390438744296638,1.50796378412959,1.43381278771531,1.11399337041197,1.13230612315533,2.42886421004937,1.16902343164525,1.97643888973262,2.89189184779626,0.567760340833074,0.178065603667255,0.325773918707152,0.659880491890142,1.32745138339963,0.971122544619926,1.209294227859,1.88605079755898,0.590603785761546,1.53717573971964,0.775284879504663,1.45413491791002,1.42598951353889,0.632073515871632,1.05418608574999,0,1.36175842301515,0.900305470156551,0.646793418913773,0.857348140126369,1.77340233642274,1.42695054081656,1.31639216481697,0.913394847343798,2.3467170806371,1.48282449604674,0.882113592219848,0.49465875882444,0.484393280087717,0.603129249281559,0.716234064018819,1.14898629821543,6.99554007911642,3.8939313422207,0.854354403989263,0.412773735926445,0.925972636848558,0.753473828018764,0.683471138605126,0.915112692826091,0.509935289981566,0.139951452323658,0.276399947608848,2.86401185404534,0.474503990371703,0.609958401380546,2.05210147561422,1.25452977608681,0.87345025498471,1.88810084938749,0.743881101528023,1.57053565190418,3.36998930558661,0.621339313086926,2.25477175473676,0.448549638131936,0,0.777804753376191,0.516639293910924,0.675824501963113,0.234714477291508,0.911430693907651,0.629156066554265,4.34851417486811,3.45636007509439,0.316011120628178,0.810900861160657,0.821687657318618,1.03936658382236,0.358053391334963,0.993406773906324,0.240390899039938,1.77227432609493,0.605798699688886,0.381034033274999,0.302478555410522,0.974578807397524,1.15454209968395,0.584384510907845,0.453460767230423,1.10992976687032,1.61484941897056,1.17519231454855,1.35232715822533,0,0.549454872801795,0.428736758158132,1.00314420807073,22.0253218620656,17.4923589872727,22.9158205375759,16.8416118696814,15.7568979547248,22.661816921691,8.10027000278167,15.7612421128477,9.06284817968409,10.8729665467882,1.24544817101012,0,0.512200817262403,0.243106717068294,0.419226325255965,1.2869045591501,1.11123363900808,0.206035057238894,0.64183841918363,1.51618327058278,0.760437899670719,0.565879024158229,0.936415074698824,0.448176066834085,0.804096565378586,0.952587382566147,0.463537303779422,1.35036454324594,0.824171801606613,0.294397840268795,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.470546902076653,0.930760686808441,0.548783918618318,0.789209134313529,2.17286582153379,0.561142271657738,0.474540072496697,1.57607171800902,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p4@Calm2,p5@Calm3,p6@Calm1
}}

Latest revision as of 04:42, 26 September 2015

Short description:p4@Calm2, p5@Calm3, p6@Calm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Calm2_5end, CAGE_peak_5_at_Calm3_5end, CAGE_peak_6_at_Calm1_5end
Coexpression cluster:MCL_coexpression_mm9:1098
Association with transcript: 205bp_to_ENSMUST00000127300_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Calm2p5@Calm3p6@Calm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B911.78
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E315.13
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.28e-1354
gray matter3.15e-1234
neural tube7.22e-1252
neural rod7.22e-1252
future spinal cord7.22e-1252
neural keel7.22e-1252
nervous system6.19e-1175
central nervous system1.23e-1073
brain grey matter2.23e-0929
regional part of telencephalon2.23e-0929
telencephalon2.23e-0929
occipital lobe3.37e-0910
visual cortex3.37e-0910
neocortex3.37e-0910
brain3.48e-0947
future brain3.48e-0947
neurectoderm3.97e-0964
neural plate3.97e-0964
presumptive neural plate3.97e-0964
regional part of brain8.41e-0946
organ system subdivision2.00e-08194
anterior neural tube2.55e-0840
cerebral cortex3.81e-0821
cerebral hemisphere3.81e-0821
pallium3.81e-0821
regional part of forebrain4.40e-0839
forebrain4.40e-0839
future forebrain4.40e-0839
regional part of cerebral cortex4.50e-0717
intestine4.95e-0731
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