FFCP PHASE1:Mm9::chr5:73398136..73398155,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231290 | |EntrezGene=231290 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UEZ8,A2RTJ6 | |UniProt=Q3UEZ8,A2RTJ6 | ||
|association_with_transcript=0bp_to_ENSMUST00000031127,NM_173403,uc008xsk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000031127,NM_173403,uc008xsk.1_5end | ||
|cluster_id=chr5:73398136..73398155,+ | |||
|description=CAGE_peak_1_at_Slc10a4_5end | |description=CAGE_peak_1_at_Slc10a4_5end | ||
|id=chr5:73398136..73398155,+ | |id=chr5:73398136..73398155,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.67e-15!33;CL:0000047!1.67e-15!33;CL:0000031!1.67e-15!33;CL:0000404!1.67e-15!33;CL:0000393!9.73e-11!39;CL:0000211!9.73e-11!39;CL:0002319!4.16e-10!43;CL:0000117!1.33e-09!23;CL:0000337!1.33e-09!23;CL:0000221!1.53e-09!44;CL:0000133!1.53e-09!44;CL:0000107!8.22e-08!9;CL:0000055!9.45e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.52e-20,33;CL:0000047,4.52e-20,33;CL:0000031,4.52e-20,33;CL:0000404,4.52e-20,33;CL:0000393,2.45e-15,39;CL:0000211,2.45e-15,39;CL:0002319,5.87e-13,43;CL:0000221,1.95e-12,44;CL:0000133,1.95e-12,44;CL:0000117,2.51e-12,23;CL:0000337,2.51e-12,23;CL:0000107,2.26e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.06e-15!102;UBERON:0000924!1.06e-15!102;UBERON:0006601!1.06e-15!102;UBERON:0001017!8.90e-14!73;UBERON:0005743!8.90e-14!73;UBERON:0002346!3.34e-13!71;UBERON:0003075!3.34e-13!71;UBERON:0007284!3.34e-13!71;UBERON:0000073!8.97e-13!75;UBERON:0001016!8.97e-13!75;UBERON:0002410!8.22e-08!9;UBERON:0001894!1.37e-07!10;UBERON:0006222!1.37e-07!10;UBERON:0002342!1.86e-07!10;UBERON:0005062!1.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.36e-19,73;UBERON:0001016,5.54e-18,75;UBERON:0004121,4.29e-16,95;UBERON:0000924,4.29e-16,95;UBERON:0006601,4.29e-16,95;UBERON:0002346,6.68e-15,64;UBERON:0003075,6.68e-15,64;UBERON:0007284,6.68e-15,64;UBERON:0010314,8.63e-12,92;UBERON:0000073,1.02e-11,54;UBERON:0010371,1.96e-11,73;UBERON:0001049,2.00e-10,52;UBERON:0005068,2.00e-10,52;UBERON:0006241,2.00e-10,52;UBERON:0007135,2.00e-10,52;UBERON:0002410,2.26e-10,9;UBERON:0001894,4.62e-10,10;UBERON:0006222,4.62e-10,10;UBERON:0003056,9.28e-09,49;UBERON:0000007,2.96e-08,8;UBERON:0003296,2.96e-08,8;UBERON:0010133,2.96e-08,8;UBERON:0002420,3.24e-08,8;UBERON:0007245,3.24e-08,8;UBERON:0010009,3.24e-08,8;UBERON:0010011,3.24e-08,8;UBERON:0000454,3.24e-08,8;UBERON:0000010,6.29e-08,11;UBERON:0002240,4.80e-07,6;UBERON:0005174,4.80e-07,6;UBERON:0001137,4.80e-07,6;UBERON:0002369,5.71e-07,7;UBERON:0006858,5.71e-07,7;UBERON:0003080,8.99e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,4.23192783417626,5.07065122804943,0,0,0,0,0,0.898800331555214,0.384218305321555,0.311068836925433,0.270011876663381,0,11.9973413449598,9.27647871996777,1.46988959057945,1.43768206527355,0,8.8092704799511,7.15049093277051,14.1318010595744,5.93488294785872,4.20843160571084,3.64639359389732,24.5681039121215,9.00420176050688,13.9046405476897,7.95497180778903,8.11518580554887,7.26957838718672,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,5.93768556259299,9.1947223186052,10.3518262626128,5.30415643688935,5.27529241934179,6.23220147819235,4.39833069653864,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0,0,0,2.54644086988199,7.32000964509802,10.4293112253677,0.695297280769106,0.255715457330331,10.8049783170971,7.94982189032012,0.407357455401265,0,0,0,0.650602214813519,1.83921683546778,2.34080768746954,2.41127708537144,2.38127747029647,2.43416068541215,1.03071897015702,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,1.13195073617213,0,1.58670339998127,2.34617075588757,4.18026009348789,4.51036114627327,2.42020229548011,2.44615848229357,3.23383564391351,1.42358718463353,2.63518327558417,1.25667604400135,2.38747766449381,1.9496408711912,0,1.29682829924817,0.995706366271836,0.569003702859245,0.913988100877831,0,0.610953983535943,0.387904974335251,0.841629838683823,0.569128834118316,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.488894929326078,0.509235257325564,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,9.15138362930414,7.97039468826982,0,0,8.51872192423893,10.9322848403059,19.6035291936847,5.01834475700359,11.5855310522845,15.8522857241746,11.7395103485719,29.8100975069538,43.4816555741176,0.321321316421807,0,0.35613120733451,0.651547837414304,0,0,0.485561272309963,0.302323556964751,0.377210159511796,1.18120757152309,0.614870295887855,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,14.2984634416591,5.04171063287669,9.18446654857557,6.00143698088458,9.3990323830405,6.77801506887868,7.73380396829969,7.91608867697958,0,0.21183207086382,4.41056796109924,0,0.161464426695906,0.180938774784468,0,0.164140899745061,2.33184669303881,20.7676338251771,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,5.3777118908793,1.01659733563424,2.16010681643603,1.46361807210128,1.09181281873089,1.88810084938749,1.81837602595739,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0,0,0,3.86379188064381,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,1.86817225651518,2.39414924040619,1.19513524027894,1.94485373654635,0.628839487883947,1.10306105070008,1.11123363900808,0.618105171716683,1.60459604795908,0.505394423527595,2.78827229879264,0.565879024158229,1.03005658216871,1.21647789569252,0.976402972245426,0.476293691283074,0.695305955669133,0.77163688185482,1.23625770240992,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,0.726732083161643,0.752875043322645,1.01537529470012,1.64635175585495,0.789209134313529,1.08643291076689,0,0.711810108745045,0.886540341380071,1.22769312950907,1.08455788830176,1.15743966588685,1.99848462350357,1.16965804222704,1.28922632428979,2.48674831689496,0.882365676478062,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,4.23192783417626,5.07065122804943,0,0,0,0,0,0.898800331555214,0.384218305321555,0.311068836925433,0.270011876663381,0,11.9973413449598,9.27647871996777,1.46988959057945,1.43768206527355,0,8.8092704799511,7.15049093277051,14.1318010595744,5.93488294785872,4.20843160571084,3.64639359389732,24.5681039121215,9.00420176050688,13.9046405476897,7.95497180778903,8.11518580554887,7.26957838718672,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,5.93768556259299,9.1947223186052,10.3518262626128,5.30415643688935,5.27529241934179,6.23220147819235,4.39833069653864,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0,0,0,2.54644086988199,7.32000964509802,10.4293112253677,0.695297280769106,0.255715457330331,10.8049783170971,7.94982189032012,0.407357455401265,0,0,0,0.650602214813519,1.83921683546778,2.34080768746954,2.41127708537144,2.38127747029647,2.43416068541215,1.03071897015702,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,1.13195073617213,0,1.58670339998127,2.34617075588757,4.18026009348789,4.51036114627327,2.42020229548011,2.44615848229357,3.23383564391351,1.42358718463353,2.63518327558417,1.25667604400135,2.38747766449381,1.9496408711912,0,1.29682829924817,0.995706366271836,0.569003702859245,0.913988100877831,0,0.610953983535943,0.387904974335251,0.841629838683823,0.569128834118316,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.488894929326078,0.509235257325564,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,9.15138362930414,7.97039468826982,0,0,8.51872192423893,10.9322848403059,19.6035291936847,5.01834475700359,11.5855310522845,15.8522857241746,11.7395103485719,29.8100975069538,43.4816555741176,0.321321316421807,0,0.35613120733451,0.651547837414304,0,0,0.485561272309963,0.302323556964751,0.377210159511796,1.18120757152309,0.614870295887855,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,14.2984634416591,5.04171063287669,9.18446654857557,6.00143698088458,9.3990323830405,6.77801506887868,7.73380396829969,7.91608867697958,0,0.21183207086382,4.41056796109924,0,0.161464426695906,0.180938774784468,0,0.164140899745061,2.33184669303881,20.7676338251771,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,5.3777118908793,1.01659733563424,2.16010681643603,1.46361807210128,1.09181281873089,1.88810084938749,1.81837602595739,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0,0,0,3.86379188064381,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,1.86817225651518,2.39414924040619,1.19513524027894,1.94485373654635,0.628839487883947,1.10306105070008,1.11123363900808,0.618105171716683,1.60459604795908,0.505394423527595,2.78827229879264,0.565879024158229,1.03005658216871,1.21647789569252,0.976402972245426,0.476293691283074,0.695305955669133,0.77163688185482,1.23625770240992,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,0.726732083161643,0.752875043322645,1.01537529470012,1.64635175585495,0.789209134313529,1.08643291076689,0,0.711810108745045,0.886540341380071,1.22769312950907,1.08455788830176,1.15743966588685,1.99848462350357,1.16965804222704,1.28922632428979,2.48674831689496,0.882365676478062,0.695603506861264 | ||
|short_description=p1@Slc10a4 | |short_description=p1@Slc10a4 | ||
}} | }} |
Latest revision as of 05:02, 26 September 2015
Short description: | p1@Slc10a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc10a4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000031127, NM_173403, uc008xsk.1_5end |
EntrezGene: | Slc10a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.52e-20 | 33 |
neuronal stem cell | 4.52e-20 | 33 |
neuroblast | 4.52e-20 | 33 |
electrically signaling cell | 4.52e-20 | 33 |
electrically responsive cell | 2.45e-15 | 39 |
electrically active cell | 2.45e-15 | 39 |
neural cell | 5.87e-13 | 43 |
ectodermal cell | 1.95e-12 | 44 |
neurectodermal cell | 1.95e-12 | 44 |
CNS neuron (sensu Vertebrata) | 2.51e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-12 | 23 |
autonomic neuron | 2.26e-10 | 9 |