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FFCP PHASE1:Mm9::chr4:117807474..117807567,-: Difference between revisions

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{{FFCP|EntrezGene=20441|HGNC=|UniProt=P97325,Q9CZ48,Q9DBB6|association_with_transcript=0bp_to_ENSMUST00000030263,ENSMUST00000097912,ENSMUST00000106410,NM_001161774,NM_009176,uc008ujk.2,uc008ujl.2,uc008ujm.2_5end|description=CAGE_peak_1_at_St3gal3_5end|id=chr4:117807474..117807567,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.24e-13!73;UBERON:0005743!1.24e-13!73;UBERON:0000025!2.40e-13!114;UBERON:0000073!1.49e-12!75;UBERON:0001016!1.49e-12!75;UBERON:0000955!3.01e-11!50;UBERON:0006238!3.01e-11!50;UBERON:0004111!5.35e-11!122;UBERON:0001049!5.36e-11!52;UBERON:0005068!5.36e-11!52;UBERON:0006241!5.36e-11!52;UBERON:0007135!5.36e-11!52;UBERON:0002616!8.71e-11!49;UBERON:0002346!1.03e-10!71;UBERON:0003075!1.03e-10!71;UBERON:0007284!1.03e-10!71;UBERON:0004121!1.54e-09!102;UBERON:0000924!1.54e-09!102;UBERON:0006601!1.54e-09!102;UBERON:0000033!4.60e-09!63;UBERON:0002020!4.29e-08!34;UBERON:0002791!2.77e-07!29;UBERON:0003528!2.77e-07!29;UBERON:0001893!2.77e-07!29;UBERON:0003080!2.90e-07!40;UBERON:0000468!5.84e-07!333;UBERON:0002780!7.28e-07!39;UBERON:0001890!7.28e-07!39;UBERON:0006240!7.28e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-13,73;UBERON:0000025,2.40e-13,114;UBERON:0010314,8.88e-13,92;UBERON:0001016,1.49e-12,75;UBERON:0000073,1.08e-11,54;UBERON:0004111,5.34e-11,122;UBERON:0001049,5.36e-11,52;UBERON:0005068,5.36e-11,52;UBERON:0006241,5.36e-11,52;UBERON:0007135,5.36e-11,52;UBERON:0000955,4.47e-10,47;UBERON:0006238,4.47e-10,47;UBERON:0002346,5.06e-10,64;UBERON:0003075,5.06e-10,64;UBERON:0007284,5.06e-10,64;UBERON:0002616,1.25e-09,46;UBERON:0004121,9.37e-09,95;UBERON:0000924,9.37e-09,95;UBERON:0006601,9.37e-09,95;UBERON:0002020,4.29e-08,34;UBERON:0010371,2.25e-07,73;UBERON:0003528,2.76e-07,29;UBERON:0002791,2.76e-07,29;UBERON:0001893,2.76e-07,29;UBERON:0003080,2.90e-07,40;UBERON:0002780,7.28e-07,39;UBERON:0001890,7.28e-07,39;UBERON:0006240,7.28e-07,39|phase1_expression=10.089377367602,0.697950815278722,0.909998478779072,0,0.500895729946347,8.2260843236826,7.2419918584613,4.64843964389675,0.422366166455,0.468129052643987,1.02730780935303,1.91453181588807,2.56801094896809,4.98296293788285,12.6581709489952,9.92128810210147,10.4934281719222,12.4607555316504,11.3804979892763,10.6097412949508,17.4338744809693,10.2269679736912,7.57479388502913,3.99981056983517,5.96464130774642,0.57423196411502,2.15380998079537,1.72376986148711,2.09025761402011,3.52842181663903,4.8780712344167,12.7006134691926,7.38077745101484,0,13.8648777480612,13.1325369833209,11.8418226632174,1.25559489221072,0,1.57057123192139,2.35292595212406,0.683045484958446,3.39857247121808,6.6725313527056,8.41428529121971,7.52541683862894,31.2956537739216,16.5699118849139,25.0442248317298,17.3042610176112,11.198913730029,20.125359011096,6.04017381807851,7.25362142011344,6.04968838456435,16.4646039063006,12.0344044774278,17.0171790451556,20.8385954685386,18.5146842745212,13.3104594736298,25.752184437254,23.1216646988896,17.5480444869873,27.6882581518753,22.7353636782752,23.9680088414724,23.8215349299364,21.2563705232379,18.9008313664367,16.6156719467592,19.7099179238624,16.3442720304194,19.8435094728226,12.4599112323707,15.6267193723704,22.0231761998777,27.197403012145,24.1162257212302,20.7061471736404,15.0039735507952,15.106487746146,27.080750903134,31.5147061617741,23.5309301576288,19.1508580557884,17.0846016958924,22.5543329448614,7.79979791331796,8.84187253249391,8.69593466105033,37.858650587181,22.4390540123558,50.192396822317,46.1341256387845,56.0033608871669,33.4257719913569,6.81721290312231,8.57293815189467,6.36011234118612,13.0984380392313,5.13305909657271,15.2883143823987,14.2213340630666,2.16491041011214,5.06719730950197,2.52762222507392,24.663718019317,10.3575153458869,18.4068252440383,16.654591369549,13.3964810457342,19.3717017695089,18.9910527096304,13.2875239063346,23.24831939599,3.70792451601561,21.8345028949067,14.153768831198,22.3238252927425,25.6176161414057,18.9101348722737,9.31958806090611,29.2780797011547,43.7743617240121,4.34276993854605,5.15205035375457,4.19931911695385,3.68503658511888,27.7112682898922,30.1950397860293,17.0889918873496,26.0736480288415,29.9187085076487,29.298114282898,25.3096370385702,8.45266719957625,17.7901967972433,14.6579199891531,8.41767423545896,12.2313216384941,13.104419952708,11.5239763075424,15.9747106905858,19.6625482547337,17.1672385181699,22.9569225171336,11.6416516832557,16.1675994699632,19.0997140969497,18.8267702855425,12.7133524807993,15.8486932058591,14.2783388274088,12.3469281844766,13.5343301436575,2.1066395619397,3.3455227924913,5.68326998791185,16.5700618028402,10.3191466391682,15.3052752241863,18.2293446400612,13.3799677588235,14.1925743856388,16.9749779667798,19.3156849007726,15.2962598500992,22.3801395882333,21.3417703302824,32.8328678660716,35.0879969820798,34.908468331277,42.8118475845586,24.3936340334388,19.551876352064,2.97376904685418,2.3800550999719,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20441
|HGNC=
|TSSclassifier=NA
|UniProt=P97325,Q9CZ48,Q9DBB6
|association_with_transcript=0bp_to_ENSMUST00000030263,ENSMUST00000097912,ENSMUST00000106410,NM_001161774,NM_009176,uc008ujk.2,uc008ujl.2,uc008ujm.2_5end
|cluster_id=chr4:117807474..117807567,-
|description=CAGE_peak_1_at_St3gal3_5end
|id=chr4:117807474..117807567,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.24e-13!73;UBERON:0005743!1.24e-13!73;UBERON:0000025!2.40e-13!114;UBERON:0000073!1.49e-12!75;UBERON:0001016!1.49e-12!75;UBERON:0000955!3.01e-11!50;UBERON:0006238!3.01e-11!50;UBERON:0004111!5.35e-11!122;UBERON:0001049!5.36e-11!52;UBERON:0005068!5.36e-11!52;UBERON:0006241!5.36e-11!52;UBERON:0007135!5.36e-11!52;UBERON:0002616!8.71e-11!49;UBERON:0002346!1.03e-10!71;UBERON:0003075!1.03e-10!71;UBERON:0007284!1.03e-10!71;UBERON:0004121!1.54e-09!102;UBERON:0000924!1.54e-09!102;UBERON:0006601!1.54e-09!102;UBERON:0000033!4.60e-09!63;UBERON:0002020!4.29e-08!34;UBERON:0002791!2.77e-07!29;UBERON:0003528!2.77e-07!29;UBERON:0001893!2.77e-07!29;UBERON:0003080!2.90e-07!40;UBERON:0000468!5.84e-07!333;UBERON:0002780!7.28e-07!39;UBERON:0001890!7.28e-07!39;UBERON:0006240!7.28e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-13,73;UBERON:0000025,2.40e-13,114;UBERON:0010314,8.88e-13,92;UBERON:0001016,1.49e-12,75;UBERON:0000073,1.08e-11,54;UBERON:0004111,5.34e-11,122;UBERON:0001049,5.36e-11,52;UBERON:0005068,5.36e-11,52;UBERON:0006241,5.36e-11,52;UBERON:0007135,5.36e-11,52;UBERON:0000955,4.47e-10,47;UBERON:0006238,4.47e-10,47;UBERON:0002346,5.06e-10,64;UBERON:0003075,5.06e-10,64;UBERON:0007284,5.06e-10,64;UBERON:0002616,1.25e-09,46;UBERON:0004121,9.37e-09,95;UBERON:0000924,9.37e-09,95;UBERON:0006601,9.37e-09,95;UBERON:0002020,4.29e-08,34;UBERON:0010371,2.25e-07,73;UBERON:0003528,2.76e-07,29;UBERON:0002791,2.76e-07,29;UBERON:0001893,2.76e-07,29;UBERON:0003080,2.90e-07,40;UBERON:0002780,7.28e-07,39;UBERON:0001890,7.28e-07,39;UBERON:0006240,7.28e-07,39
|phase1_expression=10.089377367602,0.697950815278722,0.909998478779072,0,0.500895729946347,8.2260843236826,7.2419918584613,4.64843964389675,0.422366166455,0.468129052643987,1.02730780935303,1.91453181588807,2.56801094896809,4.98296293788285,12.6581709489952,9.92128810210147,10.4934281719222,12.4607555316504,11.3804979892763,10.6097412949508,17.4338744809693,10.2269679736912,7.57479388502913,3.99981056983517,5.96464130774642,0.57423196411502,2.15380998079537,1.72376986148711,2.09025761402011,3.52842181663903,4.8780712344167,12.7006134691926,7.38077745101484,0,13.8648777480612,13.1325369833209,11.8418226632174,1.25559489221072,0,1.57057123192139,2.35292595212406,0.683045484958446,3.39857247121808,6.6725313527056,8.41428529121971,7.52541683862894,31.2956537739216,16.5699118849139,25.0442248317298,17.3042610176112,11.198913730029,20.125359011096,6.04017381807851,7.25362142011344,6.04968838456435,16.4646039063006,12.0344044774278,17.0171790451556,20.8385954685386,18.5146842745212,13.3104594736298,25.752184437254,23.1216646988896,17.5480444869873,27.6882581518753,22.7353636782752,23.9680088414724,23.8215349299364,21.2563705232379,18.9008313664367,16.6156719467592,19.7099179238624,16.3442720304194,19.8435094728226,12.4599112323707,15.6267193723704,22.0231761998777,27.197403012145,24.1162257212302,20.7061471736404,15.0039735507952,15.106487746146,27.080750903134,31.5147061617741,23.5309301576288,19.1508580557884,17.0846016958924,22.5543329448614,7.79979791331796,8.84187253249391,8.69593466105033,37.858650587181,22.4390540123558,50.192396822317,46.1341256387845,56.0033608871669,33.4257719913569,6.81721290312231,8.57293815189467,6.36011234118612,13.0984380392313,5.13305909657271,15.2883143823987,14.2213340630666,2.16491041011214,5.06719730950197,2.52762222507392,24.663718019317,10.3575153458869,18.4068252440383,16.654591369549,13.3964810457342,19.3717017695089,18.9910527096304,13.2875239063346,23.24831939599,3.70792451601561,21.8345028949067,14.153768831198,22.3238252927425,25.6176161414057,18.9101348722737,9.31958806090611,29.2780797011547,43.7743617240121,4.34276993854605,5.15205035375457,4.19931911695385,3.68503658511888,27.7112682898922,30.1950397860293,17.0889918873496,26.0736480288415,29.9187085076487,29.298114282898,25.3096370385702,8.45266719957625,17.7901967972433,14.6579199891531,8.41767423545896,12.2313216384941,13.104419952708,11.5239763075424,15.9747106905858,19.6625482547337,17.1672385181699,22.9569225171336,11.6416516832557,16.1675994699632,19.0997140969497,18.8267702855425,12.7133524807993,15.8486932058591,14.2783388274088,12.3469281844766,13.5343301436575,2.1066395619397,3.3455227924913,5.68326998791185,16.5700618028402,10.3191466391682,15.3052752241863,18.2293446400612,13.3799677588235,14.1925743856388,16.9749779667798,19.3156849007726,15.2962598500992,22.3801395882333,21.3417703302824,32.8328678660716,35.0879969820798,34.908468331277,42.8118475845586,24.3936340334388,19.551876352064,2.97376904685418,2.3800550999719,11.5175655289026,16.2565670302307,12.1135413642768,18.1515172161008,27.7972554806088,39.9473814836374,12.8122846617018,36.8925658581784,52.0263882216558,49.5401615382466,58.489226135736,16.178749355776,12.752144942607,12.7450414882795,6.44870863240478,15.1950521770939,14.6520056375005,14.255592949172,15.9041039477453,15.7805594753217,20.3621649540108,17.4179974615931,20.4098346193787,28.6281420298577,48.3217782152053,9.17648081438517,6.6830058338489,8.09503604585473,7.70868461276311,11.0941493486112,17.0599320693551,16.9740721095978,16.8620635846037,29.6526326243128,90.5739701122334,42.4240680342094,54.6065927950481,65.6705082662491,56.5101852594023,57.4107790422407,10.7156850296631,13.4538902357044,14.1779529504563,14.9375675482166,12.2038929110021,11.8929442783689,13.5684875305028,14.4398899414771,12.6108115284953,11.0732344824387,15.4671125597762,13.2729284919748,16.577758259126,13.5970115066621,4.52373851817817,8.15858525728064,18.1952781017043,10.7615331058846,35.1605792073264,32.4676371860403,15.9016897015375,55.0386621305533,16.4064274096453,15.2271110275689,18.3109888072879,15.2940030689633,14.2591151412732,15.5692091933858,20.2405350837447,17.82760733259,19.3691011193797,28.5975971615408,17.6005705658253,10.8620018237026,9.93610452056814,14.8473110675282,14.6019652173959,11.1679092631291,15.4185014052023,11.5049098651098,12.993283286754,16.908933136916,18.3484088149437,18.5402202033528,17.8248689192361,15.485801138855,13.7044191147498,10.3135543248187,15.3197822589205,12.9643987702543,13.9707378485375,14.1462443120851,14.896579625951,13.3776613201553,14.973960874793,15.22324745573,4.92810586933792,7.41412248023371,6.61585194164886,8.90385765883992,9.20347232166662,10.8563264870681,10.0272768962635,8.53532678674319,18.3632927076806,30.2243242277131,9.91051108627546,12.5895989457566,11.8524497516615,12.4323181623096,13.8061169998235,10.2950177942935,5.60928818979723,6.57771825921193,6.90999869022119,15.2747298882418,9.96458379780576,13.2157653632452,14.148699647656,11.7089445768102,10.2630404960703,15.2396711414847,14.4643547519338,17.0141362289619,7.38805347763219,3.10669656543463,1.12738587736838,11.5127740453864,14.5603471602246,13.0282296190512,13.1743019947286,11.6579726588637,9.85800804624333,14.7130954873664,12.2685432978082,4.83168241652012,10.9451402377989,9.48033361884535,11.3526120562492,12.2226039026144,10.6535074841792,10.5625750443814,11.5235185773134,11.1781768053571,11.2244040652679,6.86571859647404,12.421709484765,11.6958374758735,10.233077477674,12.5075394132428,12.6227054356094,22.2195775942907,7.10355050797007,6.54911153249173,5.37230772365051,13.7164611762855,5.44279178808428,7.14291334642334,3.64426244434412,3.51100472824754,19.7663144915973,16.5717085142584,19.4784474569395,20.4505286988988,22.6077231524312,26.4387864086395,22.2757425076496,19.8141329418657,23.1102628581944,17.6038505995619,8.09541311156578,17.9561193030464,15.3660245178721,15.5588298923708,9.4325923182592,11.7659845408009,18.0019849519308,19.5733304376949,22.1434254618353,17.9415020352296,22.5596576902313,18.8626341386076,18.1664524491572,21.7685518176556,19.5854949138641,23.8146845641537,21.5544846257431,23.1491064556446,19.3680373377554,15.4558866141117,14.7433778525729,13.3106854619503,15.0214799666812,14.0986024133359,17.2220166160055,18.6152137361688,17.0123014771678,11.0489278803894,16.4322977753493,18.5176949647054,19.8120480267371,20.981454745995,11.0492381655816,20.2967261953615,11.5743966588685,18.9856039232839,16.609144199624,14.8261027293326,13.1988949127502,16.5443564339637,20.8681052058379
|short_description=p1@St3gal3
}}

Latest revision as of 05:53, 26 September 2015

Short description:p1@St3gal3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_St3gal3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030263, ENSMUST00000097912, ENSMUST00000106410, NM_001161774, NM_009176, uc008ujk.2, uc008ujl.2, uc008ujm.2_5end
EntrezGene:St3gal3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@St3gal3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B731.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.57
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C320.84
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.75
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.74
Mouse Microglia, donor1.CNhs12629.11718-123C823.97
Mouse Microglia, donor2.CNhs12634.11736-123E823.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.90
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D97.80
Mouse Schwann, donor2.CNhs12573.11746-123F98.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C850.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F446.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.66
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D718.41
adrenal gland, embryo E14.CNhs11038.406-44C516.65
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I119.37
adrenal gland, embryo E18.CNhs11026.1262-18F518.99
adrenal gland, neonate N00.CNhs11191.1311-23C113.29
adrenal gland, neonate N25.CNhs11223.1377-27I323.25
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H121.83
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F522.32
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C318.91
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I243.77
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A427.71
corpus striatum, adult.CNhs10487.19-21D830.20
corpus striatum, neonate N00.CNhs11226.630-43F117.09
cortex, adult.CNhs10473.12-14D526.07
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F229.30
diencephalon, neonate N30.CNhs11201.1388-42B225.31
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.79
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C612.23
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C911.52
eyeball, embryo E17.CNhs11023.1261-18D415.97
eyeball, neonate N00.CNhs11207.633-15C619.66
eyeball, neonate N01.CNhs11140.1532-43E717.17
eyeball, neonate N02.CNhs11205.1551-44G822.96
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H219.10
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A812.71
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I613.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E916.57
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I915.31
heart, embryo E14.CNhs10597.403-26D418.23
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C614.19
heart, embryo E17.CNhs11025.479-18E516.97
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E315.30
heart, neonate N03.CNhs11221.1349-25I222.38
heart, neonate N10.CNhs11118.749-24G121.34
heart, neonate N16.CNhs11209.782-15G132.83
heart, neonate N20.CNhs11127.821-26I635.09
heart, neonate N25.CNhs11196.1351-25D334.91
heart, neonate N30.CNhs11202.1390-42D242.81
hippocampus, adult.CNhs10478.13-16E824.39
hippocampus, neonate N00.CNhs11228.627-43G119.55
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H418.15
intestine, embryo E17.CNhs10582.482-18D327.80
intestine, embryo E18.CNhs10526.1289-20F739.95
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E936.89
intestine, neonate N06.CNhs11102.688-20B852.03
intestine, neonate N07.CNhs11095.720-20F249.54
intestine, neonate N10.CNhs11098.755-23A558.49
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E312.75
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F815.20
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C715.90
kidney, neonate N00.CNhs11214.646-21G715.78
kidney, neonate N10.CNhs11206.758-6D520.36
kidney, neonate N20.CNhs11113.832-19I117.42
kidney, neonate N25.CNhs11122.1353-25F320.41
kidney, neonate N30.CNhs11203.1385-42H128.63
liver, adult pregnant day01.CNhs10466.508-5B248.32
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G416.97
liver, neonate N00.CNhs11117.641-24F416.86
liver, neonate N03.CNhs11123.1345-25G229.65
liver, neonate N06.CNhs11101.684-20A890.57
liver, neonate N07.CNhs11103.716-20H242.42
liver, neonate N10.CNhs11115.751-24B954.61
liver, neonate N20.CNhs11220.823-25A365.67
liver, neonate N25.CNhs11198.1368-26H156.51
liver, neonate N30.CNhs11106.1382-42D157.41
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G213.45
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C514.94
lung, embryo E16.CNhs10998.458-17B612.20
lung, embryo E17.CNhs10605.480-44A611.89
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E512.61
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E615.47
lung, neonate N20.CNhs11109.822-18A413.27
lung, neonate N25.CNhs11119.1359-25C716.58
lung, neonate N30.CNhs11133.1394-42H213.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B618.20
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C235.16
medulla oblongata, neonate N30.CNhs11200.1396-42A332.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C255.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I717.60
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G614.85
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F411.17
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B615.49
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E612.96
pituitary gland, embryo E13.CNhs11009.370-44C713.97
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B914.90
pituitary gland, embryo E16.CNhs11036.449-43F613.38
pituitary gland, embryo E17.CNhs11039.1265-44F514.97
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H310.86
skin, neonate N06.CNhs11097.693-20I510.03
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C930.22
spleen, adult.CNhs10465.25-2G29.91
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D112.43
spleen, neonate N20.CNhs11112.824-19H113.81
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D414.15
stomach, embryo E17.CNhs11006.1035-18D511.71
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B815.24
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C514.56
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I513.17
testis, embryo E18.CNhs11027.503-18G511.66
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I414.71
testis, neonate N10.CNhs11204.763-44D912.27
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I411.35
thymus, embryo E15.CNhs11005.430-45I212.22
thymus, embryo E16.CNhs11002.456-26C510.65
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G411.52
thymus, neonate N02.CNhs11181.1541-43F811.18
thymus, neonate N03.CNhs11137.2104-43C711.22
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D312.42
thymus, neonate N10.CNhs11194.748-24E411.70
thymus, neonate N20.CNhs11186.820-7A210.23
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G212.62
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I88.10
whole body, embryo E12.CNhs10587.857-27C917.96
whole body, embryo E13.CNhs10512.372-23H215.37
whole body, embryo E14.5.CNhs10578.420-27D215.56
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.30
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I518.99
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D116.54
whole body, neonate N10.CNhs10518.761-6B420.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.23e-1373
tube2.40e-13114
structure with developmental contribution from neural crest8.88e-1392
nervous system1.49e-1275
regional part of nervous system1.08e-1154
anatomical conduit5.34e-11122
neural tube5.36e-1152
neural rod5.36e-1152
future spinal cord5.36e-1152
neural keel5.36e-1152
brain4.47e-1047
future brain4.47e-1047
neurectoderm5.06e-1064
neural plate5.06e-1064
presumptive neural plate5.06e-1064
regional part of brain1.25e-0946
ectoderm-derived structure9.37e-0995
ectoderm9.37e-0995
presumptive ectoderm9.37e-0995
gray matter4.29e-0834
ecto-epithelium2.25e-0773
brain grey matter2.76e-0729
regional part of telencephalon2.76e-0729
telencephalon2.76e-0729
anterior neural tube2.90e-0740
regional part of forebrain7.28e-0739
forebrain7.28e-0739
future forebrain7.28e-0739
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