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FFCP PHASE1:Mm9::chr5:81448741..81448757,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319387
|EntrezGene=319387
|HGNC=
|HGNC=
|MCL_coexpression_id=2430
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-405bp_to_ENSMUST00000147226_5end
|association_with_transcript=-405bp_to_ENSMUST00000147226_5end
|cluster_id=chr5:81448741..81448757,+
|description=CAGE_peak_4_at_Lphn3_5end
|description=CAGE_peak_4_at_Lphn3_5end
|id=chr5:81448741..81448757,+
|id=chr5:81448741..81448757,+
|ontology_enrichment_celltype=CL:0000540!1.45e-10!33;CL:0000047!1.45e-10!33;CL:0000031!1.45e-10!33;CL:0000404!1.45e-10!33;CL:0000117!7.06e-10!23;CL:0000337!7.06e-10!23;CL:0000221!9.40e-08!44;CL:0000133!9.40e-08!44;CL:0000393!1.57e-07!39;CL:0000211!1.57e-07!39;CL:0002319!2.03e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,5.84e-11,23;CL:0000337,5.84e-11,23;CL:0000540,1.41e-10,33;CL:0000047,1.41e-10,33;CL:0000031,1.41e-10,33;CL:0000404,1.41e-10,33;CL:0000393,2.07e-07,39;CL:0000211,2.07e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.83e-22!73;UBERON:0005743!5.83e-22!73;UBERON:0000073!7.73e-22!75;UBERON:0001016!7.73e-22!75;UBERON:0004121!1.67e-21!102;UBERON:0000924!1.67e-21!102;UBERON:0006601!1.67e-21!102;UBERON:0002346!8.70e-20!71;UBERON:0003075!8.70e-20!71;UBERON:0007284!8.70e-20!71;UBERON:0001049!3.28e-19!52;UBERON:0005068!3.28e-19!52;UBERON:0006241!3.28e-19!52;UBERON:0007135!3.28e-19!52;UBERON:0000033!2.17e-18!63;UBERON:0000955!2.86e-17!50;UBERON:0006238!2.86e-17!50;UBERON:0002616!7.39e-17!49;UBERON:0003056!7.56e-17!49;UBERON:0003080!7.69e-15!40;UBERON:0002780!2.69e-14!39;UBERON:0001890!2.69e-14!39;UBERON:0006240!2.69e-14!39;UBERON:0002020!1.31e-13!34;UBERON:0002791!1.45e-10!29;UBERON:0003528!1.45e-10!29;UBERON:0001893!1.45e-10!29;UBERON:0000153!5.05e-10!94;UBERON:0000468!2.00e-08!333;UBERON:0007811!4.02e-08!86;UBERON:0000956!5.43e-08!21;UBERON:0001869!5.43e-08!21;UBERON:0000203!5.43e-08!21;UBERON:0002619!1.72e-07!17;UBERON:0002021!6.39e-07!10;UBERON:0000411!6.39e-07!10;UBERON:0001950!6.39e-07!10;UBERON:0000922!8.29e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-22,73;UBERON:0002346,7.36e-22,64;UBERON:0003075,7.36e-22,64;UBERON:0007284,7.36e-22,64;UBERON:0001016,9.76e-22,75;UBERON:0000073,1.69e-21,54;UBERON:0004121,4.18e-21,95;UBERON:0000924,4.18e-21,95;UBERON:0006601,4.18e-21,95;UBERON:0010371,1.32e-20,73;UBERON:0001049,1.97e-20,52;UBERON:0005068,1.97e-20,52;UBERON:0006241,1.97e-20,52;UBERON:0007135,1.97e-20,52;UBERON:0003056,5.77e-17,49;UBERON:0000955,1.27e-16,47;UBERON:0006238,1.27e-16,47;UBERON:0002616,3.82e-16,46;UBERON:0003080,1.94e-15,40;UBERON:0002780,8.44e-15,39;UBERON:0001890,8.44e-15,39;UBERON:0006240,8.44e-15,39;UBERON:0002020,9.36e-15,34;UBERON:0010314,1.79e-12,92;UBERON:0003528,3.66e-11,29;UBERON:0002791,3.66e-11,29;UBERON:0001893,3.66e-11,29;UBERON:0002021,4.42e-08,10;UBERON:0000411,4.42e-08,10;UBERON:0001950,4.42e-08,10;UBERON:0000956,4.54e-08,21;UBERON:0001869,4.54e-08,21;UBERON:0000203,4.54e-08,21;UBERON:0002619,4.83e-08,17
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.58328969722285,0.419959264876088,0,0,0,0,0.257259436035947,0,0,4.24864567805155,6.87688273053643,3.80298842103708,0,0.889294796111139,0,0,0,0,0.384218305321555,1.55534418462716,0.945041568321835,1.05162480675691,4.57041575046086,2.87129103237098,1.5923803897944,1.53352753629178,4.5960939330501,3.30347642998166,2.55374676170375,1.84327839907492,5.01167893374737,3.20206752608434,2.08365348222704,1.67509799400829,1.68828783009504,1.22238598221448,7.36571463684169,4.55589378557129,3.54158947068071,0.757261933331841,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.593768556259299,1.21439728736295,0,0.691846491768175,0.452167921657868,1.05829836422134,0.125666591329675,0,0,0,0.808834249737046,0,0,0,2.63502717310392,4.81727425670947,0.255457055208591,0,0,0,3.14560342750128,1.83000241127451,3.01570445070875,3.99795936442236,2.81287003063364,3.74018480207208,4.70499662896497,1.73126918545538,0.124406970610093,0.758168275301024,0.420883711772948,0.780722657776222,1.60931473103431,2.16074555766419,2.26057226753573,2.72145996605311,2.69038812598185,2.43624483855295,1.29351685369508,1.5089759505299,3.59301552318857,3.87092473160687,1.53437012699302,4.17070873838397,1.39300866608867,1.85203922767149,3.38358253591438,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,1.18372367792605,0.196764231747404,1.07986979021165,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,2.10289948564127,2.98423375899925,0,0,1.06644125267617,0.928946687441754,1.54640953586512,1.21010114774006,0.22237804384487,0.760902504450237,0,0.988193728344065,0.251335208800269,0.397912944082302,0,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,1.25673363870702,0,0.203651327845314,1.16371492300575,1.40271639780637,0.822074982615345,0.295220295959204,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0,0,0,0,2.40179147216586,1.13694847062291,1.14075483509418,1.01847051465113,0.234690248288502,1.17254380209271,1.19021820443007,2.14647012643579,2.52216230569906,1.55025282754142,2.23236676120482,2.29408640602033,1.03610989119537,2.60368305446721,0,0.54390568381871,0.491764273019036,0.551873492609465,2.40825884981688,1.75817529888305,0,0.252470927204373,1.26203287766503,0.780877488593277,1.72338718186239,2.15071918157297,2.22798674082394,1.41538265394416,0.404810701674894,0.584511715822624,1.97643888973262,2.24924921495265,0.851640511249612,2.49291845134157,3.4206261464251,0.989820737835213,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,2.70091641046965,2.19909762430683,3.64372959553707,3.3694644392032,4.28085162244969,2.96188237083818,0.608929898229199,0,0.21183207086382,0,0.8244312647074,1.77610869365496,1.08563264870681,1.3130957840345,0.984845398470368,0,2.41052892613663,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.42323626988794,1.62008011232702,1.25452977608681,0.87345025498471,0.944050424693745,0.826534557253359,0,0.388844919875379,0,0,2.0932316446157,1.65458490457098,1.94451188344048,1.6790777052105,1.68956125490778,1.87771581833206,1.17183946359555,0.524296722128554,0,0,0,1.82452693761148,0.308132871494482,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0.36630324853453,0,0,5.0827665835536,3.68260189205742,2.29158205375759,5.499301834998,4.7955776383945,3.0215755895588,3.37511250115903,3.60256962579376,3.17199686288943,2.07104124700728,0.62272408550506,1.99512436700516,2.90247129782028,1.21553358534147,0.838452650511929,0.919217542250071,2.66696073361938,1.44224540067226,2.24643446714271,1.76888048234658,2.02783439912192,1.50901073108861,2.43467919421694,2.17685518176556,1.7230640686684,4.28664322154766,2.78122382267653,1.35036454324594,0.824171801606613,2.20798380201596,2.40008476669791,1.95223386775271,1.90748951957857,1.88950341622027,2.1645157495526,1.86152137361688,1.09756783723664,2.10455769150274,1.08643291076689,5.05028044491965,1.54225523561426,1.87158516513571,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,1.71896843238639,0.956441660344217,0,0.927471342481686
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.58328969722285,0.419959264876088,0,0,0,0,0.257259436035947,0,0,4.24864567805155,6.87688273053643,3.80298842103708,0,0.889294796111139,0,0,0,0,0.384218305321555,1.55534418462716,0.945041568321835,1.05162480675691,4.57041575046086,2.87129103237098,1.5923803897944,1.53352753629178,4.5960939330501,3.30347642998166,2.55374676170375,1.84327839907492,5.01167893374737,3.20206752608434,2.08365348222704,1.67509799400829,1.68828783009504,1.22238598221448,7.36571463684169,4.55589378557129,3.54158947068071,0.757261933331841,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.593768556259299,1.21439728736295,0,0.691846491768175,0.452167921657868,1.05829836422134,0.125666591329675,0,0,0,0.808834249737046,0,0,0,2.63502717310392,4.81727425670947,0.255457055208591,0,0,0,3.14560342750128,1.83000241127451,3.01570445070875,3.99795936442236,2.81287003063364,3.74018480207208,4.70499662896497,1.73126918545538,0.124406970610093,0.758168275301024,0.420883711772948,0.780722657776222,1.60931473103431,2.16074555766419,2.26057226753573,2.72145996605311,2.69038812598185,2.43624483855295,1.29351685369508,1.5089759505299,3.59301552318857,3.87092473160687,1.53437012699302,4.17070873838397,1.39300866608867,1.85203922767149,3.38358253591438,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,1.18372367792605,0.196764231747404,1.07986979021165,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,2.10289948564127,2.98423375899925,0,0,1.06644125267617,0.928946687441754,1.54640953586512,1.21010114774006,0.22237804384487,0.760902504450237,0,0.988193728344065,0.251335208800269,0.397912944082302,0,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,1.25673363870702,0,0.203651327845314,1.16371492300575,1.40271639780637,0.822074982615345,0.295220295959204,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0,0,0,0,2.40179147216586,1.13694847062291,1.14075483509418,1.01847051465113,0.234690248288502,1.17254380209271,1.19021820443007,2.14647012643579,2.52216230569906,1.55025282754142,2.23236676120482,2.29408640602033,1.03610989119537,2.60368305446721,0,0.54390568381871,0.491764273019036,0.551873492609465,2.40825884981688,1.75817529888305,0,0.252470927204373,1.26203287766503,0.780877488593277,1.72338718186239,2.15071918157297,2.22798674082394,1.41538265394416,0.404810701674894,0.584511715822624,1.97643888973262,2.24924921495265,0.851640511249612,2.49291845134157,3.4206261464251,0.989820737835213,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,2.70091641046965,2.19909762430683,3.64372959553707,3.3694644392032,4.28085162244969,2.96188237083818,0.608929898229199,0,0.21183207086382,0,0.8244312647074,1.77610869365496,1.08563264870681,1.3130957840345,0.984845398470368,0,2.41052892613663,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.42323626988794,1.62008011232702,1.25452977608681,0.87345025498471,0.944050424693745,0.826534557253359,0,0.388844919875379,0,0,2.0932316446157,1.65458490457098,1.94451188344048,1.6790777052105,1.68956125490778,1.87771581833206,1.17183946359555,0.524296722128554,0,0,0,1.82452693761148,0.308132871494482,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0.36630324853453,0,0,5.0827665835536,3.68260189205742,2.29158205375759,5.499301834998,4.7955776383945,3.0215755895588,3.37511250115903,3.60256962579376,3.17199686288943,2.07104124700728,0.62272408550506,1.99512436700516,2.90247129782028,1.21553358534147,0.838452650511929,0.919217542250071,2.66696073361938,1.44224540067226,2.24643446714271,1.76888048234658,2.02783439912192,1.50901073108861,2.43467919421694,2.17685518176556,1.7230640686684,4.28664322154766,2.78122382267653,1.35036454324594,0.824171801606613,2.20798380201596,2.40008476669791,1.95223386775271,1.90748951957857,1.88950341622027,2.1645157495526,1.86152137361688,1.09756783723664,2.10455769150274,1.08643291076689,5.05028044491965,1.54225523561426,1.87158516513571,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,1.71896843238639,0.956441660344217,0,0.927471342481686
|short_description=p4@Lphn3
|short_description=p4@Lphn3
}}
}}

Latest revision as of 06:06, 26 September 2015

Short description:p4@Lphn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lphn3_5end
Coexpression cluster:MCL_coexpression_mm9:2430
Association with transcript: -405bp_to_ENSMUST00000147226_5end
EntrezGene:Lphn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lphn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.84e-1123
neuroblast (sensu Vertebrata)5.84e-1123
neuron1.41e-1033
neuronal stem cell1.41e-1033
neuroblast1.41e-1033
electrically signaling cell1.41e-1033
electrically responsive cell2.07e-0739
electrically active cell2.07e-0739

Uber anatomy
Ontology termp-valuen
central nervous system2.49e-2273
neurectoderm7.36e-2264
neural plate7.36e-2264
presumptive neural plate7.36e-2264
nervous system9.76e-2275
regional part of nervous system1.69e-2154
ectoderm-derived structure4.18e-2195
ectoderm4.18e-2195
presumptive ectoderm4.18e-2195
ecto-epithelium1.32e-2073
neural tube1.97e-2052
neural rod1.97e-2052
future spinal cord1.97e-2052
neural keel1.97e-2052
pre-chordal neural plate5.77e-1749
brain1.27e-1647
future brain1.27e-1647
regional part of brain3.82e-1646
anterior neural tube1.94e-1540
regional part of forebrain8.44e-1539
forebrain8.44e-1539
future forebrain8.44e-1539
gray matter9.36e-1534
structure with developmental contribution from neural crest1.79e-1292
brain grey matter3.66e-1129
regional part of telencephalon3.66e-1129
telencephalon3.66e-1129
occipital lobe4.42e-0810
visual cortex4.42e-0810
neocortex4.42e-0810
cerebral cortex4.54e-0821
cerebral hemisphere4.54e-0821
pallium4.54e-0821
regional part of cerebral cortex4.83e-0817
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