FFCP PHASE1:Mm9::chr7:19589396..19589444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272359 | |EntrezGene=272359 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3Y8 | |UniProt=Q8R3Y8 | ||
|association_with_transcript=0bp_to_ENSMUST00000053713,NM_178757,uc009fkc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000053713,NM_178757,uc009fkc.1_5end | ||
|cluster_id=chr7:19589396..19589444,+ | |||
|description=CAGE_peak_1_at_Irf2bp1_5end | |description=CAGE_peak_1_at_Irf2bp1_5end | ||
|id=chr7:19589396..19589444,+ | |id=chr7:19589396..19589444,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!1.23e-12!43;CL:0000540!8.92e-11!33;CL:0000047!8.92e-11!33;CL:0000031!8.92e-11!33;CL:0000404!8.92e-11!33;CL:0002321!2.11e-08!70;CL:0000220!2.11e-08!70;CL:0000055!6.82e-08!50 | |ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!1.23e-12!43;CL:0000540!8.92e-11!33;CL:0000047!8.92e-11!33;CL:0000031!8.92e-11!33;CL:0000404!8.92e-11!33;CL:0002321!2.11e-08!70;CL:0000220!2.11e-08!70;CL:0000055!6.82e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.22e-15,23;CL:0000337,6.22e-15,23;CL:0000221,3.55e-13,44;CL:0000133,3.55e-13,44;CL:0002319,1.23e-12,43;CL:0000540,8.92e-11,33;CL:0000047,8.92e-11,33;CL:0000031,8.92e-11,33;CL:0000404,8.92e-11,33;CL:0002321,2.11e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-19!73;UBERON:0005743!1.18e-19!73;UBERON:0000073!9.09e-18!75;UBERON:0001016!9.09e-18!75;UBERON:0001049!1.78e-16!52;UBERON:0005068!1.78e-16!52;UBERON:0006241!1.78e-16!52;UBERON:0007135!1.78e-16!52;UBERON:0000153!1.71e-15!94;UBERON:0002346!2.35e-15!71;UBERON:0003075!2.35e-15!71;UBERON:0007284!2.35e-15!71;UBERON:0007811!3.30e-15!86;UBERON:0000033!3.51e-15!63;UBERON:0000955!4.25e-15!50;UBERON:0006238!4.25e-15!50;UBERON:0002616!6.98e-15!49;UBERON:0004121!6.73e-14!102;UBERON:0000924!6.73e-14!102;UBERON:0006601!6.73e-14!102;UBERON:0003056!1.87e-12!49;UBERON:0003080!3.71e-12!40;UBERON:0002780!8.49e-12!39;UBERON:0001890!8.49e-12!39;UBERON:0006240!8.49e-12!39;UBERON:0002020!5.15e-11!34;UBERON:0002791!2.31e-08!29;UBERON:0003528!2.31e-08!29;UBERON:0001893!2.31e-08!29 | |ontology_enrichment_uberon=UBERON:0001017!1.18e-19!73;UBERON:0005743!1.18e-19!73;UBERON:0000073!9.09e-18!75;UBERON:0001016!9.09e-18!75;UBERON:0001049!1.78e-16!52;UBERON:0005068!1.78e-16!52;UBERON:0006241!1.78e-16!52;UBERON:0007135!1.78e-16!52;UBERON:0000153!1.71e-15!94;UBERON:0002346!2.35e-15!71;UBERON:0003075!2.35e-15!71;UBERON:0007284!2.35e-15!71;UBERON:0007811!3.30e-15!86;UBERON:0000033!3.51e-15!63;UBERON:0000955!4.25e-15!50;UBERON:0006238!4.25e-15!50;UBERON:0002616!6.98e-15!49;UBERON:0004121!6.73e-14!102;UBERON:0000924!6.73e-14!102;UBERON:0006601!6.73e-14!102;UBERON:0003056!1.87e-12!49;UBERON:0003080!3.71e-12!40;UBERON:0002780!8.49e-12!39;UBERON:0001890!8.49e-12!39;UBERON:0006240!8.49e-12!39;UBERON:0002020!5.15e-11!34;UBERON:0002791!2.31e-08!29;UBERON:0003528!2.31e-08!29;UBERON:0001893!2.31e-08!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-19,73;UBERON:0000073,8.47e-18,54;UBERON:0001016,9.09e-18,75;UBERON:0001049,1.78e-16,52;UBERON:0005068,1.78e-16,52;UBERON:0006241,1.78e-16,52;UBERON:0007135,1.78e-16,52;UBERON:0002346,1.11e-15,64;UBERON:0003075,1.11e-15,64;UBERON:0007284,1.11e-15,64;UBERON:0004121,8.22e-14,95;UBERON:0000924,8.22e-14,95;UBERON:0006601,8.22e-14,95;UBERON:0000955,1.18e-13,47;UBERON:0006238,1.18e-13,47;UBERON:0002616,1.92e-13,46;UBERON:0010371,4.24e-13,73;UBERON:0003056,1.87e-12,49;UBERON:0003080,3.71e-12,40;UBERON:0002780,8.49e-12,39;UBERON:0001890,8.49e-12,39;UBERON:0006240,8.49e-12,39;UBERON:0002020,5.15e-11,34;UBERON:0010314,9.16e-10,92;UBERON:0003528,2.31e-08,29;UBERON:0002791,2.31e-08,29;UBERON:0001893,2.31e-08,29 | |||
|phase1_expression=34.2718532804259,15.0059425284925,21.8399634906977,19.660173734944,31.0555352566735,21.4885468047219,17.7545606852599,18.593758575587,20.4143647119917,22.7042590532334,16.4369249496485,15.3960266860999,16.7776715332582,15.3859908257435,14.6568295198892,10.7311891716608,15.3903613188192,13.5648731104042,13.7114433605739,13.1560792057389,15.818051968099,14.2978969729275,9.92559198727954,11.9994317095055,15.1410125504332,19.5238867799107,22.3996238002719,17.8841123129288,14.4417798786844,20.1624103807945,11.9734475753865,17.14582818341,23.3724619282137,0,28.3074587356249,26.4313086120003,26.1336776015832,13.393012183581,16.4080422349998,12.0410461113974,18.2351761289614,18.442228093878,16.9928623560904,13.2191658874356,13.3817549209759,11.1963518818626,52.4202200713186,33.1398237698279,31.195437948295,32.275363246331,24.3576373628131,31.6255641602937,23.3217822420254,18.859415692295,24.5348473373999,9.51859913333004,11.1748041576115,13.9231464914909,43.0934061630943,49.7251520515711,64.0169717541241,27.7852516296688,17.7858959222228,24.7472422252385,19.7773272513395,31.9716051725745,29.9600110518405,53.0221261343745,37.9503981049028,48.872149676072,48.1644161494665,41.1337417541477,35.5598350932098,40.1769821425049,38.7215702913675,57.9107835564313,33.0347642998166,29.1127130834228,30.8749131845049,46.6877458564886,49.7692781197108,55.2168172790166,33.7811428791671,34.3285192119325,33.004421519791,36.2393160132611,32.6031149029946,43.0582719856444,9.61722655331437,9.29530189313462,15.3628179011889,11.185510400758,10.879541339324,12.9528765993076,9.74664626171504,9.85659151614138,13.7635531729117,15.6795896771813,11.6903702071291,15.546941278455,34.9291681046168,21.815501160434,135.046777044522,270.205347198266,14.9378818297738,16.9751109868316,23.7596489156948,15.300639882354,4.91981978929626,19.8912466346865,26.5432549952188,20.0947215686013,19.3717017695089,17.4838263041042,13.2875239063346,21.3633205260448,7.91023896749996,9.10975948595443,12.3845477272982,20.2208562434261,16.1214308476087,13.5765070877862,22.3670113461747,20.4946557908083,23.8769245767339,14.5610521468897,9.58520996047362,10.1983464268879,10.4197586199913,26.3631525352488,22.8750301409313,46.1151472254212,20.3374454624963,18.4115129277838,20.778804455956,18.6577452527921,25.3580015987288,13.31154585528,7.58168275301024,13.4682787767343,26.804811250317,22.3005041300469,18.9065236295617,20.4958552256572,20.0707672496417,23.4448108121275,28.2979208170381,18.6266426932091,30.3950870035308,24.5837904218165,29.5597888595434,21.2619860454748,21.409638190371,19.1538691587192,14.8163138213719,23.8841120182192,9.12877143507205,10.0365683774739,10.2298859782413,17.8128164380532,17.12040237862,15.6653993471083,16.8088762265499,17.5120166255189,14.5011086114136,14.4171045745253,18.7791380979733,13.077718345123,21.3927804887525,11.984224877774,16.1326930996253,17.2515985161892,12.0752563410078,12.0785776884335,21.2392848049769,32.7236667366125,9.91256348951394,17.7181879664575,23.8882840599462,20.2045904518582,19.7167215822803,14.5212137728807,14.8993289376063,16.3594038456801,18.0321043386914,13.0112174231969,16.5881237808178,18.502951899827,14.0374142725766,14.3811105384675,12.1037307929829,18.7192796859105,22.1911444115106,20.3362352445317,11.270773567308,16.6994088833158,23.4682509472827,18.5158564510441,15.6194246696916,12.1040321343274,11.6179058602617,11.105744752962,11.5616524563988,13.3476084572875,11.2038627214526,12.1425540687821,12.9830477688642,14.2294524253926,14.5136735515409,11.5078454980324,9.72811360650212,7.13859674289012,2.87536413054709,16.3742016974142,15.601883655728,17.4279425783507,8.96987067609561,8.20153986317724,18.6600722068271,25.5813405890154,21.8373068432315,25.9709981236038,23.2343345805617,21.1057884376688,19.5195785526531,27.7089779958074,17.4975009957872,18.3815692408483,22.9614866866781,17.3695113598682,16.2323882953942,18.2257813812705,10.5553898757491,14.1415477792864,13.277635371514,17.6599517635029,21.3532284683763,18.1678114217915,17.3771042099276,15.1482556322624,14.1978698737316,14.8366722832723,19.8189525914175,15.5329718669159,14.0363164671908,22.9291989938954,14.1683745586213,22.503701059171,16.2067988958075,23.1351347823701,16.4650498841592,32.0518086601059,22.1526264720863,17.1568927891437,15.9294166007955,23.7925023431882,27.8137672407571,18.1060876565662,28.3489817165542,17.2163682848599,16.7978390559344,18.5402202033528,22.8158322166222,22.4386098134429,15.8127912862498,25.7838858120467,30.9800041235947,23.9481255061643,34.0213338348644,37.9376552005918,26.2463545790565,36.2088699732203,27.4796864405542,39.2759784357833,6.8054795338476,5.93129798418696,12.1290618930229,15.6641940294406,13.0786185623683,12.6657142349127,15.0409153443952,10.3408766839389,16.3229268512716,22.6218868452822,11.4483490134561,25.1791978915131,11.4820606969221,8.2882121082064,12.4391747226133,10.066239621087,12.5784038195453,16.794174278839,12.0233977209849,9.54670618015114,26.7303914576059,21.9585024496997,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| ||
|short_description=p1@Irf2bp1 | |short_description=p1@Irf2bp1 | ||
}} | }} |
Latest revision as of 07:59, 26 September 2015
Short description: | p1@Irf2bp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Irf2bp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000053713, NM_178757, uc009fkc.1_5end |
EntrezGene: | Irf2bp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.22e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.22e-15 | 23 |
ectodermal cell | 3.55e-13 | 44 |
neurectodermal cell | 3.55e-13 | 44 |
neural cell | 1.23e-12 | 43 |
neuron | 8.92e-11 | 33 |
neuronal stem cell | 8.92e-11 | 33 |
neuroblast | 8.92e-11 | 33 |
electrically signaling cell | 8.92e-11 | 33 |
embryonic cell | 2.11e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.18e-19 | 73 |
regional part of nervous system | 8.47e-18 | 54 |
nervous system | 9.09e-18 | 75 |
neural tube | 1.78e-16 | 52 |
neural rod | 1.78e-16 | 52 |
future spinal cord | 1.78e-16 | 52 |
neural keel | 1.78e-16 | 52 |
neurectoderm | 1.11e-15 | 64 |
neural plate | 1.11e-15 | 64 |
presumptive neural plate | 1.11e-15 | 64 |
ectoderm-derived structure | 8.22e-14 | 95 |
ectoderm | 8.22e-14 | 95 |
presumptive ectoderm | 8.22e-14 | 95 |
brain | 1.18e-13 | 47 |
future brain | 1.18e-13 | 47 |
regional part of brain | 1.92e-13 | 46 |
ecto-epithelium | 4.24e-13 | 73 |
pre-chordal neural plate | 1.87e-12 | 49 |
anterior neural tube | 3.71e-12 | 40 |
regional part of forebrain | 8.49e-12 | 39 |
forebrain | 8.49e-12 | 39 |
future forebrain | 8.49e-12 | 39 |
gray matter | 5.15e-11 | 34 |
structure with developmental contribution from neural crest | 9.16e-10 | 92 |
brain grey matter | 2.31e-08 | 29 |
regional part of telencephalon | 2.31e-08 | 29 |
telencephalon | 2.31e-08 | 29 |