FFCP PHASE1:Mm9::chr17:34742844..34742884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55979 | |EntrezGene=55979 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1280 | |MCL_coexpression_id=1280 | ||
|TSSclassifier=NA | |||
|UniProt=G3UXY8 | |UniProt=G3UXY8 | ||
|association_with_transcript=-33bp_to_ENSMUST00000174228_5end | |association_with_transcript=-33bp_to_ENSMUST00000174228_5end | ||
|cluster_id=chr17:34742844..34742884,+ | |||
|description=CAGE_peak_1_at_Agpat1_5end | |description=CAGE_peak_1_at_Agpat1_5end | ||
|id=chr17:34742844..34742884,+ | |id=chr17:34742844..34742884,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.31e-16!43;CL:0000221!1.74e-15!44;CL:0000133!1.74e-15!44;CL:0000055!2.82e-14!50;CL:0000540!3.60e-11!33;CL:0000047!3.60e-11!33;CL:0000031!3.60e-11!33;CL:0000404!3.60e-11!33;CL:0000117!4.35e-11!23;CL:0000337!4.35e-11!23;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0002321!4.76e-08!70;CL:0000220!4.76e-08!70 | |ontology_enrichment_celltype=CL:0002319!5.31e-16!43;CL:0000221!1.74e-15!44;CL:0000133!1.74e-15!44;CL:0000055!2.82e-14!50;CL:0000540!3.60e-11!33;CL:0000047!3.60e-11!33;CL:0000031!3.60e-11!33;CL:0000404!3.60e-11!33;CL:0000117!4.35e-11!23;CL:0000337!4.35e-11!23;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0002321!4.76e-08!70;CL:0000220!4.76e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.31e-16,43;CL:0000221,1.74e-15,44;CL:0000133,1.74e-15,44;CL:0000540,3.60e-11,33;CL:0000047,3.60e-11,33;CL:0000031,3.60e-11,33;CL:0000404,3.60e-11,33;CL:0000117,4.35e-11,23;CL:0000337,4.35e-11,23;CL:0000393,1.28e-10,39;CL:0000211,1.28e-10,39;CL:0002321,4.76e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.25e-29!75;UBERON:0001016!9.25e-29!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0001049!1.21e-21!52;UBERON:0005068!1.21e-21!52;UBERON:0006241!1.21e-21!52;UBERON:0007135!1.21e-21!52;UBERON:0004121!9.55e-20!102;UBERON:0000924!9.55e-20!102;UBERON:0006601!9.55e-20!102;UBERON:0000955!1.38e-19!50;UBERON:0006238!1.38e-19!50;UBERON:0002616!3.58e-19!49;UBERON:0002020!8.17e-18!34;UBERON:0002346!9.74e-18!71;UBERON:0003075!9.74e-18!71;UBERON:0007284!9.74e-18!71;UBERON:0003080!2.03e-17!40;UBERON:0002780!5.81e-17!39;UBERON:0001890!5.81e-17!39;UBERON:0006240!5.81e-17!39;UBERON:0000033!1.18e-14!63;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0003056!3.59e-14!49;UBERON:0000956!7.86e-11!21;UBERON:0001869!7.86e-11!21;UBERON:0000203!7.86e-11!21;UBERON:0002619!1.49e-09!17;UBERON:0002021!5.72e-07!10;UBERON:0000411!5.72e-07!10;UBERON:0001950!5.72e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!9.25e-29!75;UBERON:0001016!9.25e-29!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0001049!1.21e-21!52;UBERON:0005068!1.21e-21!52;UBERON:0006241!1.21e-21!52;UBERON:0007135!1.21e-21!52;UBERON:0004121!9.55e-20!102;UBERON:0000924!9.55e-20!102;UBERON:0006601!9.55e-20!102;UBERON:0000955!1.38e-19!50;UBERON:0006238!1.38e-19!50;UBERON:0002616!3.58e-19!49;UBERON:0002020!8.17e-18!34;UBERON:0002346!9.74e-18!71;UBERON:0003075!9.74e-18!71;UBERON:0007284!9.74e-18!71;UBERON:0003080!2.03e-17!40;UBERON:0002780!5.81e-17!39;UBERON:0001890!5.81e-17!39;UBERON:0006240!5.81e-17!39;UBERON:0000033!1.18e-14!63;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0003056!3.59e-14!49;UBERON:0000956!7.86e-11!21;UBERON:0001869!7.86e-11!21;UBERON:0000203!7.86e-11!21;UBERON:0002619!1.49e-09!17;UBERON:0002021!5.72e-07!10;UBERON:0000411!5.72e-07!10;UBERON:0001950!5.72e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.25e-29,75;UBERON:0001017,3.81e-28,73;UBERON:0000073,1.43e-22,54;UBERON:0001049,1.21e-21,52;UBERON:0005068,1.21e-21,52;UBERON:0006241,1.21e-21,52;UBERON:0007135,1.21e-21,52;UBERON:0004121,3.93e-20,95;UBERON:0000924,3.93e-20,95;UBERON:0006601,3.93e-20,95;UBERON:0002346,1.44e-18,64;UBERON:0003075,1.44e-18,64;UBERON:0007284,1.44e-18,64;UBERON:0000955,2.24e-18,47;UBERON:0006238,2.24e-18,47;UBERON:0002616,5.73e-18,46;UBERON:0002020,8.17e-18,34;UBERON:0003080,2.03e-17,40;UBERON:0002780,5.81e-17,39;UBERON:0001890,5.81e-17,39;UBERON:0006240,5.81e-17,39;UBERON:0003528,1.59e-14,29;UBERON:0002791,1.59e-14,29;UBERON:0001893,1.59e-14,29;UBERON:0003056,3.59e-14,49;UBERON:0010371,7.48e-14,73;UBERON:0010314,5.44e-13,92;UBERON:0000956,7.86e-11,21;UBERON:0001869,7.86e-11,21;UBERON:0000203,7.86e-11,21;UBERON:0002619,1.49e-09,17;UBERON:0002021,5.72e-07,10;UBERON:0000411,5.72e-07,10;UBERON:0001950,5.72e-07,10 | |||
|phase1_expression=29.9478344085965,61.4196717445275,55.9649064449129,61.7026991065933,55.5994260240445,44.9916448723865,47.1897534002962,25.6955413648737,13.51571732656,13.8098070529976,20.3749382188351,25.7664073554937,19.8592846720199,23.4286678482913,25.3163418979904,22.069804145491,16.0899231969474,24.7637799806217,21.3898516424952,22.4926515452956,69.480368053424,22.8369187762036,20.373583552837,75.8364084040748,55.0582274561208,41.9189333803965,43.0761996159075,53.8678081714723,47.6958782835498,25.2030129759931,41.9070665138526,39.3719017544971,43.0545351309199,31.6963362030877,13.5760261283099,18.4520456347927,11.637653306955,39.7605049200062,27.346737058333,29.8408534065065,41.764435650202,41.6657745824652,41.2683800076481,32.1036885837722,31.9337333341471,42.3992997493484,150.219138114824,58.4307419099597,79.9657705153477,77.3830998315648,46.0555327147443,79.0639104007344,17.6171736360623,15.2326049822382,20.5017217476903,56.8543353639443,39.2550812716097,33.0030139057563,74.452457596332,72.4717641602685,63.3831403506179,70.8185072024486,60.4720461355575,91.339821304062,111.741898970068,80.9947331038554,94.6736349238159,116.418146512431,48.630428172676,49.2771674910671,50.6883156856831,121.401668371617,91.6604444949196,44.4641601150283,45.1432168495893,52.3954708367712,50.6533052597188,61.0345476047197,51.4581886408416,79.7912040767673,72.6411890203133,57.3004707612436,58.9076127892914,51.7741601229146,60.8137026151704,84.263775445469,78.7315394819039,83.3205522839094,42.785299233249,51.6909471130413,26.957397449256,9.46466264679525,0.679971333707751,4.85732872474035,3.89865850468601,4.48026887097336,32.0213277900394,41.9258593542022,32.7330365799615,34.6272783020133,30.844708931093,32.0816193535795,33.1246811618639,28.4426681261332,17.9687564039308,19.0019899106324,16.1767822404731,25.9197406962266,42.7247508017833,35.9229976536876,43.1978463647678,48.1055455733183,41.2801740088345,31.953199797156,24.3408623770909,32.1706473803969,38.3152199988279,41.2108167221748,40.6920853896942,29.4415666904285,23.6300424752621,17.455509112868,41.0061874679869,34.255353250351,26.1808383516819,47.515012268798,8.98613433794402,11.3981518888747,11.690460890722,58.7179306466905,82.8076091101714,52.0209017747259,68.3129578355646,64.9517261619039,59.6351687885937,55.1620294430376,23.2193749578721,25.379022004459,43.9737599674594,27.7783249770146,41.1180599762144,40.0029661714243,42.4946626340624,33.1550599238573,27.4187091579851,33.3095672740609,30.6404639310313,24.0594134787285,42.8980305936356,41.9815497972559,40.6447096818722,38.7976446396807,28.9169139194622,26.8154168222068,23.0475992776897,31.6464484241404,12.6398373716382,14.411482798424,14.2081749697796,50.331562726127,46.201633816276,35.2921640463589,43.5610313476787,37.3852040320067,31.3162239161378,32.3222183203067,32.9976283721532,15.9968519043022,28.9625335847726,22.9834449710733,27.4823264360451,26.4621977239851,30.517466025456,21.4730270016595,76.1249613802141,55.6713952971929,58.4841245881322,58.9724763659704,39.8849028500887,33.6743174197636,39.9489130098489,44.5720589417587,44.2532307251292,44.7030221364514,33.6915633696603,31.1281024428381,20.8608223304224,29.047644918008,29.4395771549871,34.1551375288604,36.0950543290739,36.0445704590405,48.5549826439889,33.70331121987,39.4477074855781,38.4901009627644,39.7602598693633,28.5452786953597,30.5432474310163,30.1124701878388,31.7137430239577,27.2707732267179,5.33614728756868,40.2096704775787,40.4911529933198,32.6050062958038,29.0089973585559,35.2118653238529,26.2264627334862,22.4402987211632,10.5387897403773,13.453509246216,8.62609239164127,8.18710084870708,9.67316786655138,9.09283960609602,5.38192240565737,5.78932225636041,27.1587189544909,37.8982823540969,38.2967694638761,30.0448801822083,31.9178737672363,33.8362640032468,34.754371569358,34.7337893186882,31.2117585330258,21.9250042752287,34.1233204927022,21.3022309130459,23.3124725518959,20.1062191428301,52.7769493787453,42.4246433378593,50.6517201209607,38.6311444826625,49.4495817162399,47.0018863234735,32.7869890753351,23.4797962300067,38.1764945493671,37.0916807081807,47.6085708989486,41.3416020457915,41.4405533793253,43.5937857414802,44.9339878859133,48.5144724132778,42.6910800182245,55.5885877409726,40.16904411394,32.0518086601059,23.7814960656221,35.9634868080127,31.8588332015911,40.5443662378819,29.0230614686161,31.1198381597232,44.5905858249967,40.2740043806545,24.0338312646446,28.7191646287229,19.9638531895444,25.5989773928011,30.5713964867496,20.6271086496374,37.4483566329167,42.8545403794518,57.6939729671085,40.9383736910341,49.1232447189098,58.148234538275,45.2509806655833,55.7170856879717,39.1901752466396,34.104963409075,43.0030376207176,13.5206727412014,15.1776561094151,20.5667074005011,14.4440536243795,14.7726809770555,32.6458537025433,49.1377050327851,32.2945964707942,36.5304756294904,30.7422915433721,21.0972671845254,29.3892589600204,27.4533807847827,16.9978429993855,16.2343684695443,14.5109972494645,55.3708958448766,42.8635271302438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| ||
|short_description=p1@Agpat1 | |short_description=p1@Agpat1 | ||
}} | }} |
Latest revision as of 08:29, 26 September 2015
Short description: | p1@Agpat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agpat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1280 |
Association with transcript: | -33bp_to_ENSMUST00000174228_5end |
EntrezGene: | Agpat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.31e-16 | 43 |
ectodermal cell | 1.74e-15 | 44 |
neurectodermal cell | 1.74e-15 | 44 |
neuron | 3.60e-11 | 33 |
neuronal stem cell | 3.60e-11 | 33 |
neuroblast | 3.60e-11 | 33 |
electrically signaling cell | 3.60e-11 | 33 |
CNS neuron (sensu Vertebrata) | 4.35e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-11 | 23 |
electrically responsive cell | 1.28e-10 | 39 |
electrically active cell | 1.28e-10 | 39 |
embryonic cell | 4.76e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.25e-29 | 75 |
central nervous system | 3.81e-28 | 73 |
regional part of nervous system | 1.43e-22 | 54 |
neural tube | 1.21e-21 | 52 |
neural rod | 1.21e-21 | 52 |
future spinal cord | 1.21e-21 | 52 |
neural keel | 1.21e-21 | 52 |
ectoderm-derived structure | 3.93e-20 | 95 |
ectoderm | 3.93e-20 | 95 |
presumptive ectoderm | 3.93e-20 | 95 |
neurectoderm | 1.44e-18 | 64 |
neural plate | 1.44e-18 | 64 |
presumptive neural plate | 1.44e-18 | 64 |
brain | 2.24e-18 | 47 |
future brain | 2.24e-18 | 47 |
regional part of brain | 5.73e-18 | 46 |
gray matter | 8.17e-18 | 34 |
anterior neural tube | 2.03e-17 | 40 |
regional part of forebrain | 5.81e-17 | 39 |
forebrain | 5.81e-17 | 39 |
future forebrain | 5.81e-17 | 39 |
brain grey matter | 1.59e-14 | 29 |
regional part of telencephalon | 1.59e-14 | 29 |
telencephalon | 1.59e-14 | 29 |
pre-chordal neural plate | 3.59e-14 | 49 |
ecto-epithelium | 7.48e-14 | 73 |
structure with developmental contribution from neural crest | 5.44e-13 | 92 |
cerebral cortex | 7.86e-11 | 21 |
cerebral hemisphere | 7.86e-11 | 21 |
pallium | 7.86e-11 | 21 |
regional part of cerebral cortex | 1.49e-09 | 17 |
occipital lobe | 5.72e-07 | 10 |
visual cortex | 5.72e-07 | 10 |
neocortex | 5.72e-07 | 10 |