FFCP PHASE1:Mm9::chr7:25184625..25184692,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:25184625..25184692,+
|short_description=p1@1500002O20Rik
|description=CAGE_peak_1_at_1500002O20Rik_5end
|association_with_transcript=0bp_to_ENSMUST00000002...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71997 | |EntrezGene=71997 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1011 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB90 | |UniProt=Q9DB90 | ||
|association_with_transcript=0bp_to_ENSMUST00000002280,ENSMUST00000146381,NM_028047,uc009fpm.1,uc009fpn.1_5end | |||
|cluster_id=chr7:25184625..25184692,+ | |||
|description=CAGE_peak_1_at_1500002O20Rik_5end | |||
|id=chr7:25184625..25184692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.67e-15,64;UBERON:0003075,3.67e-15,64;UBERON:0007284,3.67e-15,64;UBERON:0001049,1.95e-14,52;UBERON:0005068,1.95e-14,52;UBERON:0006241,1.95e-14,52;UBERON:0007135,1.95e-14,52;UBERON:0000073,1.23e-13,54;UBERON:0000955,7.56e-13,47;UBERON:0006238,7.56e-13,47;UBERON:0002616,3.15e-12,46;UBERON:0003056,3.52e-12,49;UBERON:0001016,3.88e-12,75;UBERON:0001017,7.51e-12,73;UBERON:0004121,4.11e-11,95;UBERON:0000924,4.11e-11,95;UBERON:0006601,4.11e-11,95;UBERON:0010371,6.63e-11,73;UBERON:0003080,8.44e-10,40;UBERON:0002780,2.64e-09,39;UBERON:0001890,2.64e-09,39;UBERON:0006240,2.64e-09,39;UBERON:0002020,5.43e-09,34;UBERON:0010314,1.22e-08,92;UBERON:0002021,1.40e-07,10;UBERON:0000411,1.40e-07,10;UBERON:0001950,1.40e-07,10;UBERON:0003528,1.72e-07,29;UBERON:0002791,1.72e-07,29;UBERON:0001893,1.72e-07,29 | |||
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| ||
|short_description=p1@1500002O20Rik | |||
}} | }} |
Latest revision as of 09:26, 26 September 2015
Short description: | p1@1500002O20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1500002O20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1011 |
Association with transcript: | 0bp_to_ENSMUST00000002280, ENSMUST00000146381, NM_028047, uc009fpm.1, uc009fpn.1_5end |
EntrezGene: | 1500002O20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.67e-15 | 64 |
neural plate | 3.67e-15 | 64 |
presumptive neural plate | 3.67e-15 | 64 |
neural tube | 1.95e-14 | 52 |
neural rod | 1.95e-14 | 52 |
future spinal cord | 1.95e-14 | 52 |
neural keel | 1.95e-14 | 52 |
regional part of nervous system | 1.23e-13 | 54 |
brain | 7.56e-13 | 47 |
future brain | 7.56e-13 | 47 |
regional part of brain | 3.15e-12 | 46 |
pre-chordal neural plate | 3.52e-12 | 49 |
nervous system | 3.88e-12 | 75 |
central nervous system | 7.51e-12 | 73 |
ectoderm-derived structure | 4.11e-11 | 95 |
ectoderm | 4.11e-11 | 95 |
presumptive ectoderm | 4.11e-11 | 95 |
ecto-epithelium | 6.63e-11 | 73 |
anterior neural tube | 8.44e-10 | 40 |
regional part of forebrain | 2.64e-09 | 39 |
forebrain | 2.64e-09 | 39 |
future forebrain | 2.64e-09 | 39 |
gray matter | 5.43e-09 | 34 |
structure with developmental contribution from neural crest | 1.22e-08 | 92 |
occipital lobe | 1.40e-07 | 10 |
visual cortex | 1.40e-07 | 10 |
neocortex | 1.40e-07 | 10 |
brain grey matter | 1.72e-07 | 29 |
regional part of telencephalon | 1.72e-07 | 29 |
telencephalon | 1.72e-07 | 29 |