FFCP PHASE1:Mm9::chr1:137662795..137662802,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:137662795..137662802,+
|short_description=p3@Phlda3
|description=CAGE_peak_3_at_Phlda3_5end
|association_with_transcript=99bp_to_ENSMUST00000038945_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27280 | |EntrezGene=27280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=600 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WV95 | |UniProt=Q9WV95 | ||
|association_with_transcript=99bp_to_ENSMUST00000038945_5end | |||
|cluster_id=chr1:137662795..137662802,+ | |||
|description=CAGE_peak_3_at_Phlda3_5end | |||
|id=chr1:137662795..137662802,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.31e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.97e-13,6;CL:0000187,8.97e-13,6;CL:0000056,8.97e-13,6;CL:0000222,6.84e-11,7;CL:0000192,3.40e-10,3;CL:0000359,3.40e-10,3;CL:0002539,3.40e-10,3;CL:0000514,3.40e-10,3;CL:0002321,3.57e-09,70;CL:0000068,1.04e-08,3;CL:0002202,1.04e-08,3;CL:0000069,1.04e-08,3;CL:0002632,1.04e-08,3;CL:0002368,1.04e-08,3;CL:0000307,1.04e-08,3;CL:0000377,1.04e-08,3;CL:0000355,2.23e-08,9;CL:0000878,3.44e-07,2;CL:0000129,3.44e-07,2;CL:0000333,6.86e-07,10;CL:0000095,6.86e-07,10;CL:0000243,6.86e-07,10;CL:0000123,6.86e-07,10;CL:0000125,6.86e-07,10;CL:0000030,6.86e-07,10;CL:0000339,6.86e-07,10;CL:0000708,7.14e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,2.34e-10,10;UBERON:0001135,3.40e-10,3;UBERON:0004237,3.40e-10,3;UBERON:0004695,3.40e-10,3;UBERON:0002111,3.40e-10,3;UBERON:0004178,3.40e-10,3;UBERON:0003126,1.04e-08,3;UBERON:0001005,1.04e-08,3;UBERON:0007196,1.04e-08,3;UBERON:0001558,1.04e-08,3;UBERON:0001134,2.23e-08,9;UBERON:0002036,2.23e-08,9;UBERON:0002385,2.23e-08,9;UBERON:0000486,2.23e-08,9;UBERON:0007503,2.23e-08,9;UBERON:0001015,2.23e-08,9;UBERON:0002329,2.23e-08,9;UBERON:0003082,2.23e-08,9;UBERON:0003059,2.23e-08,9;UBERON:0007282,2.23e-08,9;UBERON:0004290,2.23e-08,9;UBERON:0009618,2.23e-08,9;UBERON:0000947,1.00e-07,4;UBERON:0001637,1.00e-07,4;UBERON:0004573,1.00e-07,4;UBERON:0003509,1.00e-07,4;UBERON:0004571,1.00e-07,4;UBERON:0010191,1.00e-07,4;UBERON:0004572,1.00e-07,4;UBERON:0003210,7.14e-07,2;UBERON:0007524,8.92e-07,11;UBERON:0003077,8.92e-07,11;UBERON:0007285,8.92e-07,11 | |||
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| ||
|short_description=p3@Phlda3 | |||
}} | }} |
Latest revision as of 10:52, 26 September 2015
Short description: | p3@Phlda3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Phlda3_5end |
Coexpression cluster: | MCL_coexpression_mm9:600 |
Association with transcript: | 99bp_to_ENSMUST00000038945_5end |
EntrezGene: | Phlda3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.97e-13 | 6 |
muscle cell | 8.97e-13 | 6 |
myoblast | 8.97e-13 | 6 |
mesodermal cell | 6.84e-11 | 7 |
smooth muscle cell | 3.40e-10 | 3 |
vascular associated smooth muscle cell | 3.40e-10 | 3 |
aortic smooth muscle cell | 3.40e-10 | 3 |
smooth muscle myoblast | 3.40e-10 | 3 |
embryonic cell | 3.57e-09 | 70 |
duct epithelial cell | 1.04e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.04e-08 | 3 |
branched duct epithelial cell | 1.04e-08 | 3 |
epithelial cell of lower respiratory tract | 1.04e-08 | 3 |
respiratory epithelial cell | 1.04e-08 | 3 |
tracheal epithelial cell | 1.04e-08 | 3 |
tracheoblast | 1.04e-08 | 3 |
multi-potent skeletal muscle stem cell | 2.23e-08 | 9 |
central nervous system macrophage | 3.44e-07 | 2 |
microglial cell | 3.44e-07 | 2 |
migratory neural crest cell | 6.86e-07 | 10 |
neuron associated cell | 6.86e-07 | 10 |
glial cell (sensu Vertebrata) | 6.86e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.86e-07 | 10 |
glial cell | 6.86e-07 | 10 |
glioblast | 6.86e-07 | 10 |
glioblast (sensu Vertebrata) | 6.86e-07 | 10 |
leptomeningeal cell | 7.14e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 2.34e-10 | 10 |
smooth muscle tissue | 3.40e-10 | 3 |
blood vessel smooth muscle | 3.40e-10 | 3 |
arterial system smooth muscle | 3.40e-10 | 3 |
artery smooth muscle tissue | 3.40e-10 | 3 |
aorta smooth muscle tissue | 3.40e-10 | 3 |
trachea | 1.04e-08 | 3 |
respiratory airway | 1.04e-08 | 3 |
tracheobronchial tree | 1.04e-08 | 3 |
lower respiratory tract | 1.04e-08 | 3 |
skeletal muscle tissue | 2.23e-08 | 9 |
striated muscle tissue | 2.23e-08 | 9 |
muscle tissue | 2.23e-08 | 9 |
multilaminar epithelium | 2.23e-08 | 9 |
epithelial vesicle | 2.23e-08 | 9 |
musculature | 2.23e-08 | 9 |
somite | 2.23e-08 | 9 |
myotome | 2.23e-08 | 9 |
presomitic mesoderm | 2.23e-08 | 9 |
presumptive segmental plate | 2.23e-08 | 9 |
dermomyotome | 2.23e-08 | 9 |
trunk paraxial mesoderm | 2.23e-08 | 9 |
aorta | 1.00e-07 | 4 |
artery | 1.00e-07 | 4 |
systemic artery | 1.00e-07 | 4 |
arterial blood vessel | 1.00e-07 | 4 |
systemic arterial system | 1.00e-07 | 4 |
aortic system | 1.00e-07 | 4 |
arterial system | 1.00e-07 | 4 |
blood-cerebrospinal fluid barrier | 7.14e-07 | 2 |
dense mesenchyme tissue | 8.92e-07 | 11 |
paraxial mesoderm | 8.92e-07 | 11 |
presumptive paraxial mesoderm | 8.92e-07 | 11 |