FFCP PHASE1:Mm9::chr10:83903368..83903375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77976 | |EntrezGene=77976 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1047 | |||
|TSSclassifier=NA | |||
|UniProt=Q641K5 | |UniProt=Q641K5 | ||
|association_with_transcript=-26bp_to_ENSMUST00000020220_5end | |association_with_transcript=-26bp_to_ENSMUST00000020220_5end | ||
|cluster_id=chr10:83903368..83903375,- | |||
|description=CAGE_peak_8_at_Nuak1_5end | |description=CAGE_peak_8_at_Nuak1_5end | ||
|id=chr10:83903368..83903375,- | |id=chr10:83903368..83903375,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.70e-08,7;CL:0000128,1.47e-07,6;CL:0000126,1.47e-07,6;CL:0000127,1.47e-07,6;CL:0000680,7.55e-07,6;CL:0000187,7.55e-07,6;CL:0000056,7.55e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.20e-11!21;UBERON:0001869!3.20e-11!21;UBERON:0000203!3.20e-11!21;UBERON:0000025!7.10e-11!114;UBERON:0002791!1.37e-10!29;UBERON:0003528!1.37e-10!29;UBERON:0001893!1.37e-10!29;UBERON:0000955!3.33e-10!50;UBERON:0006238!3.33e-10!50;UBERON:0004111!4.17e-10!122;UBERON:0002616!5.26e-10!49;UBERON:0002020!9.90e-10!34;UBERON:0001049!2.57e-09!52;UBERON:0005068!2.57e-09!52;UBERON:0006241!2.57e-09!52;UBERON:0007135!2.57e-09!52;UBERON:0000033!3.62e-09!63;UBERON:0002780!4.07e-09!39;UBERON:0001890!4.07e-09!39;UBERON:0006240!4.07e-09!39;UBERON:0002619!8.10e-09!17;UBERON:0003080!9.12e-09!40;UBERON:0003056!1.72e-08!49;UBERON:0001017!4.67e-08!73;UBERON:0005743!4.67e-08!73;UBERON:0000073!7.72e-08!75;UBERON:0001016!7.72e-08!75;UBERON:0004121!1.19e-07!102;UBERON:0000924!1.19e-07!102;UBERON:0006601!1.19e-07!102;UBERON:0002346!1.25e-07!71;UBERON:0003075!1.25e-07!71;UBERON:0007284!1.25e-07!71;UBERON:0004535!5.20e-07!23;UBERON:0001009!5.20e-07!23;UBERON:0000468!8.98e-07!333 | |ontology_enrichment_uberon=UBERON:0000956!3.20e-11!21;UBERON:0001869!3.20e-11!21;UBERON:0000203!3.20e-11!21;UBERON:0000025!7.10e-11!114;UBERON:0002791!1.37e-10!29;UBERON:0003528!1.37e-10!29;UBERON:0001893!1.37e-10!29;UBERON:0000955!3.33e-10!50;UBERON:0006238!3.33e-10!50;UBERON:0004111!4.17e-10!122;UBERON:0002616!5.26e-10!49;UBERON:0002020!9.90e-10!34;UBERON:0001049!2.57e-09!52;UBERON:0005068!2.57e-09!52;UBERON:0006241!2.57e-09!52;UBERON:0007135!2.57e-09!52;UBERON:0000033!3.62e-09!63;UBERON:0002780!4.07e-09!39;UBERON:0001890!4.07e-09!39;UBERON:0006240!4.07e-09!39;UBERON:0002619!8.10e-09!17;UBERON:0003080!9.12e-09!40;UBERON:0003056!1.72e-08!49;UBERON:0001017!4.67e-08!73;UBERON:0005743!4.67e-08!73;UBERON:0000073!7.72e-08!75;UBERON:0001016!7.72e-08!75;UBERON:0004121!1.19e-07!102;UBERON:0000924!1.19e-07!102;UBERON:0006601!1.19e-07!102;UBERON:0002346!1.25e-07!71;UBERON:0003075!1.25e-07!71;UBERON:0007284!1.25e-07!71;UBERON:0004535!5.20e-07!23;UBERON:0001009!5.20e-07!23;UBERON:0000468!8.98e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.08e-15,21;UBERON:0001869,1.08e-15,21;UBERON:0000203,1.08e-15,21;UBERON:0003528,7.18e-13,29;UBERON:0002791,7.18e-13,29;UBERON:0001893,7.18e-13,29;UBERON:0002619,9.60e-12,17;UBERON:0002020,6.18e-10,34;UBERON:0002616,6.39e-10,46;UBERON:0002021,1.22e-09,10;UBERON:0000411,1.22e-09,10;UBERON:0001950,1.22e-09,10;UBERON:0000955,1.55e-09,47;UBERON:0006238,1.55e-09,47;UBERON:0000025,2.62e-09,114;UBERON:0002780,1.49e-08,39;UBERON:0001890,1.49e-08,39;UBERON:0006240,1.49e-08,39;UBERON:0004111,2.29e-08,122;UBERON:0000073,3.59e-08,54;UBERON:0003080,3.60e-08,40;UBERON:0001049,7.51e-08,52;UBERON:0005068,7.51e-08,52;UBERON:0006241,7.51e-08,52;UBERON:0007135,7.51e-08,52;UBERON:0001017,7.91e-07,73 | |||
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| ||
|short_description=p8@Nuak1 | |short_description=p8@Nuak1 | ||
}} | }} |
Latest revision as of 12:04, 26 September 2015
Short description: | p8@Nuak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nuak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1047 |
Association with transcript: | -26bp_to_ENSMUST00000020220_5end |
EntrezGene: | Nuak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.70e-08 | 7 |
oligodendrocyte | 1.47e-07 | 6 |
macroglial cell | 1.47e-07 | 6 |
astrocyte | 1.47e-07 | 6 |
muscle precursor cell | 7.55e-07 | 6 |
muscle cell | 7.55e-07 | 6 |
myoblast | 7.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.08e-15 | 21 |
cerebral hemisphere | 1.08e-15 | 21 |
pallium | 1.08e-15 | 21 |
brain grey matter | 7.18e-13 | 29 |
regional part of telencephalon | 7.18e-13 | 29 |
telencephalon | 7.18e-13 | 29 |
regional part of cerebral cortex | 9.60e-12 | 17 |
gray matter | 6.18e-10 | 34 |
regional part of brain | 6.39e-10 | 46 |
occipital lobe | 1.22e-09 | 10 |
visual cortex | 1.22e-09 | 10 |
neocortex | 1.22e-09 | 10 |
brain | 1.55e-09 | 47 |
future brain | 1.55e-09 | 47 |
tube | 2.62e-09 | 114 |
regional part of forebrain | 1.49e-08 | 39 |
forebrain | 1.49e-08 | 39 |
future forebrain | 1.49e-08 | 39 |
anatomical conduit | 2.29e-08 | 122 |
regional part of nervous system | 3.59e-08 | 54 |
anterior neural tube | 3.60e-08 | 40 |
neural tube | 7.51e-08 | 52 |
neural rod | 7.51e-08 | 52 |
future spinal cord | 7.51e-08 | 52 |
neural keel | 7.51e-08 | 52 |
central nervous system | 7.91e-07 | 73 |