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FFCP PHASE1:Mm9::chr9:29220220..29220263,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:29220220..29220263,-
|DHSsupport=NA
|short_description=p2@Ntm
|DPIdataset=NA
|description=CAGE_peak_2_at_Ntm_5end
|association_with_transcript=-431bp_to_ENSMUST00000115237_5end
|EntrezGene=235106
|EntrezGene=235106
|HGNC=
|HGNC=
|MCL_coexpression_id=367
|TSSclassifier=NA
|UniProt=Q99PJ0
|UniProt=Q99PJ0
|association_with_transcript=-431bp_to_ENSMUST00000115237_5end
|cluster_id=chr9:29220220..29220263,-
|description=CAGE_peak_2_at_Ntm_5end
|id=chr9:29220220..29220263,-
|ontology_enrichment_celltype=CL:0000117!4.39e-11!23;CL:0000337!4.39e-11!23;CL:0000540!4.13e-09!33;CL:0000047!4.13e-09!33;CL:0000031!4.13e-09!33;CL:0000404!4.13e-09!33;CL:0000221!9.60e-08!44;CL:0000133!9.60e-08!44;CL:0002319!2.24e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-12,23;CL:0000337,1.68e-12,23;CL:0000540,1.15e-07,33;CL:0000047,1.15e-07,33;CL:0000031,1.15e-07,33;CL:0000404,1.15e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.14e-21!71;UBERON:0003075!1.14e-21!71;UBERON:0007284!1.14e-21!71;UBERON:0000073!1.90e-21!75;UBERON:0001016!1.90e-21!75;UBERON:0000033!5.98e-21!63;UBERON:0001017!9.69e-21!73;UBERON:0005743!9.69e-21!73;UBERON:0004121!1.65e-20!102;UBERON:0000924!1.65e-20!102;UBERON:0006601!1.65e-20!102;UBERON:0001049!7.21e-19!52;UBERON:0005068!7.21e-19!52;UBERON:0006241!7.21e-19!52;UBERON:0007135!7.21e-19!52;UBERON:0003056!3.74e-18!49;UBERON:0000955!3.79e-17!50;UBERON:0006238!3.79e-17!50;UBERON:0002616!1.98e-16!49;UBERON:0003080!9.50e-14!40;UBERON:0002020!9.80e-14!34;UBERON:0002780!3.53e-13!39;UBERON:0001890!3.53e-13!39;UBERON:0006240!3.53e-13!39;UBERON:0000153!1.55e-10!94;UBERON:0002791!2.33e-10!29;UBERON:0003528!2.33e-10!29;UBERON:0001893!2.33e-10!29;UBERON:0007811!7.21e-10!86;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0000468!4.74e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.62e-26,64;UBERON:0003075,5.62e-26,64;UBERON:0007284,5.62e-26,64;UBERON:0000073,4.14e-23,54;UBERON:0010371,2.74e-22,73;UBERON:0004121,9.51e-22,95;UBERON:0000924,9.51e-22,95;UBERON:0006601,9.51e-22,95;UBERON:0001049,1.01e-21,52;UBERON:0005068,1.01e-21,52;UBERON:0006241,1.01e-21,52;UBERON:0007135,1.01e-21,52;UBERON:0003056,2.63e-21,49;UBERON:0001016,4.57e-21,75;UBERON:0010314,1.47e-20,92;UBERON:0001017,3.08e-20,73;UBERON:0000955,5.93e-18,47;UBERON:0006238,5.93e-18,47;UBERON:0002616,4.21e-17,46;UBERON:0002020,2.47e-16,34;UBERON:0003080,6.56e-16,40;UBERON:0002780,3.26e-15,39;UBERON:0001890,3.26e-15,39;UBERON:0006240,3.26e-15,39;UBERON:0003528,3.47e-12,29;UBERON:0002791,3.47e-12,29;UBERON:0001893,3.47e-12,29;UBERON:0002021,6.57e-09,10;UBERON:0000411,6.57e-09,10;UBERON:0001950,6.57e-09,10;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21
|phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0,0,15.1737345644698,14.8117474196169,8.87363964908651,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,1.08004750665353,1.26194976810829,15.996455126613,13.0312439161452,1.46988959057945,1.72521847832825,0.919218786610021,2.20231761998777,4.85211884723713,4.14737639791857,17.4089899803856,15.0039735507952,17.7110545989298,2.79182999001381,2.25105044012672,2.90316670775939,16.7938293719991,16.0879999302986,20.6903384866084,2.27178579999552,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,3.09855523508697,0,0,0,0,0,0,0,0,0,1.21439728736295,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,29.5708604981663,36.2342802787277,0,0,0,0,5.54225365797844,2.74500361691176,4.64921102817598,4.86708096538374,7.41574826257959,6.44142938134636,5.51620294430376,1.62942982160506,0,0,2.52530227063769,1.04096354370163,2.5289231487682,3.42118046630164,6.0281927134286,9.79725587779121,6.40568601424249,7.77724313845749,13.1938719076898,1.07783996466421,3.02569728268511,2.81521798662318,1.09597866213787,0.834141747676794,0.696504333044333,0.411564272815887,1.59227413454795,0,0,0,4.76389276831654,3.28336483973535,4.32148947506436,4.97163944728941,1.77087808572663,1.3884040159864,1.16266972375204,0.804820204198858,0.583826711835847,1.31647879930784,0.985004784474571,0.405344047729279,0.292399974850665,0,0,1.47202963994889,1.9551876352064,0,0,3.41261200856374,2.55460339046482,0.644337306610467,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,1.51734320762465,3.19895835307241,1.1270773567308,1.22190796707189,2.13347735884388,1.19230893813542,0.379419222745544,0.147610147979602,0,0,0,0.667380422864376,0.589676985339609,0.449724224769707,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,3.41084541186873,0.651859905768103,0.678980343100753,0.938760993154008,0,0,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,1.9266070798535,3.8679856575427,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.668396022247182,0.849229592366497,0,0.584511715822624,0,17.6726724031994,0.141940085208269,1.06839362200353,1.62886959353576,2.47455184458803,0,1.94224508923985,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,2.88097750450096,2.8458910432206,3.00071849044229,1.77340233642274,1.42695054081656,2.30368628842969,0.304464949114599,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0.291480836629851,2.22510362412612,0,4.33412422722767,0.925972636848558,0,0,0,0,0,0,0,0.949007980743406,0.813277868507395,1.29606408986162,1.04544148007234,0.218362563746178,0.674321731924103,0.991841468704031,0,0.129614973291793,0,0,0,0,0.777804753376191,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,11.2950368523413,9.66682996665071,14.3223878359849,12.3734291287455,9.59115527678899,7.55393897389701,8.77529250301348,5.40385443869065,4.53142408984205,4.65984280576638,1.14166082342594,3.19219898720825,3.41467211508268,1.70174701947806,2.30574478890781,2.38996560985018,3.11145418922261,1.85431551515005,3.20919209591815,2.02157769411038,2.02783439912192,3.58390048633545,2.34103768674706,2.56100609619477,2.81433797882505,2.38146845641537,2.66533949673168,1.54327376370964,1.64834360321323,1.91358596174717,3.42869252385415,2.12970967391205,1.66905332963125,2.47088908274958,2.91739079287525,2.45382362885862,2.37806364734604,2.36762740294059,2.03706170768793,2.80571135828869,2.13543032623513,2.75812550651578,1.22769312950907,2.32405261778949,1.54325288784913,1.99848462350357,2.33931608445408,1.71896843238639,1.3390183244819,0.441182838239031,0.231867835620421
|phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0,0,15.1737345644698,14.8117474196169,8.87363964908651,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,1.08004750665353,1.26194976810829,15.996455126613,13.0312439161452,1.46988959057945,1.72521847832825,0.919218786610021,2.20231761998777,4.85211884723713,4.14737639791857,17.4089899803856,15.0039735507952,17.7110545989298,2.79182999001381,2.25105044012672,2.90316670775939,16.7938293719991,16.0879999302986,20.6903384866084,2.27178579999552,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,3.09855523508697,0,0,0,0,0,0,0,0,0,1.21439728736295,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,29.5708604981663,36.2342802787277,0,0,0,0,5.54225365797844,2.74500361691176,4.64921102817598,4.86708096538374,7.41574826257959,6.44142938134636,5.51620294430376,1.62942982160506,0,0,2.52530227063769,1.04096354370163,2.5289231487682,3.42118046630164,6.0281927134286,9.79725587779121,6.40568601424249,7.77724313845749,13.1938719076898,1.07783996466421,3.02569728268511,2.81521798662318,1.09597866213787,0.834141747676794,0.696504333044333,0.411564272815887,1.59227413454795,0,0,0,4.76389276831654,3.28336483973535,4.32148947506436,4.97163944728941,1.77087808572663,1.3884040159864,1.16266972375204,0.804820204198858,0.583826711835847,1.31647879930784,0.985004784474571,0.405344047729279,0.292399974850665,0,0,1.47202963994889,1.9551876352064,0,0,3.41261200856374,2.55460339046482,0.644337306610467,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,1.51734320762465,3.19895835307241,1.1270773567308,1.22190796707189,2.13347735884388,1.19230893813542,0.379419222745544,0.147610147979602,0,0,0,0.667380422864376,0.589676985339609,0.449724224769707,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,3.41084541186873,0.651859905768103,0.678980343100753,0.938760993154008,0,0,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,1.9266070798535,3.8679856575427,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.668396022247182,0.849229592366497,0,0.584511715822624,0,17.6726724031994,0.141940085208269,1.06839362200353,1.62886959353576,2.47455184458803,0,1.94224508923985,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,2.88097750450096,2.8458910432206,3.00071849044229,1.77340233642274,1.42695054081656,2.30368628842969,0.304464949114599,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0.291480836629851,2.22510362412612,0,4.33412422722767,0.925972636848558,0,0,0,0,0,0,0,0.949007980743406,0.813277868507395,1.29606408986162,1.04544148007234,0.218362563746178,0.674321731924103,0.991841468704031,0,0.129614973291793,0,0,0,0,0.777804753376191,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,11.2950368523413,9.66682996665071,14.3223878359849,12.3734291287455,9.59115527678899,7.55393897389701,8.77529250301348,5.40385443869065,4.53142408984205,4.65984280576638,1.14166082342594,3.19219898720825,3.41467211508268,1.70174701947806,2.30574478890781,2.38996560985018,3.11145418922261,1.85431551515005,3.20919209591815,2.02157769411038,2.02783439912192,3.58390048633545,2.34103768674706,2.56100609619477,2.81433797882505,2.38146845641537,2.66533949673168,1.54327376370964,1.64834360321323,1.91358596174717,3.42869252385415,2.12970967391205,1.66905332963125,2.47088908274958,2.91739079287525,2.45382362885862,2.37806364734604,2.36762740294059,2.03706170768793,2.80571135828869,2.13543032623513,2.75812550651578,1.22769312950907,2.32405261778949,1.54325288784913,1.99848462350357,2.33931608445408,1.71896843238639,1.3390183244819,0.441182838239031,0.231867835620421
|short_description=p2@Ntm
}}
}}

Latest revision as of 12:44, 26 September 2015

Short description:p2@Ntm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ntm_5end
Coexpression cluster:MCL_coexpression_mm9:367
Association with transcript: -431bp_to_ENSMUST00000115237_5end
EntrezGene:Ntm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ntm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.17
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.69
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I236.23
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.68e-1223
neuroblast (sensu Vertebrata)1.68e-1223
neuron1.15e-0733
neuronal stem cell1.15e-0733
neuroblast1.15e-0733
electrically signaling cell1.15e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm5.62e-2664
neural plate5.62e-2664
presumptive neural plate5.62e-2664
regional part of nervous system4.14e-2354
ecto-epithelium2.74e-2273
ectoderm-derived structure9.51e-2295
ectoderm9.51e-2295
presumptive ectoderm9.51e-2295
neural tube1.01e-2152
neural rod1.01e-2152
future spinal cord1.01e-2152
neural keel1.01e-2152
pre-chordal neural plate2.63e-2149
nervous system4.57e-2175
structure with developmental contribution from neural crest1.47e-2092
central nervous system3.08e-2073
brain5.93e-1847
future brain5.93e-1847
regional part of brain4.21e-1746
gray matter2.47e-1634
anterior neural tube6.56e-1640
regional part of forebrain3.26e-1539
forebrain3.26e-1539
future forebrain3.26e-1539
brain grey matter3.47e-1229
regional part of telencephalon3.47e-1229
telencephalon3.47e-1229
occipital lobe6.57e-0910
visual cortex6.57e-0910
neocortex6.57e-0910
cerebral cortex1.52e-0721
cerebral hemisphere1.52e-0721
pallium1.52e-0721
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