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FFCP PHASE1:Mm9::chr2:29980049..29980107,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227693
|EntrezGene=227693
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80ZJ6
|UniProt=Q80ZJ6
|association_with_transcript=0bp_to_ENSMUST00000113677,ENSMUST00000133354,ENSMUST00000154231_5end
|association_with_transcript=0bp_to_ENSMUST00000113677,ENSMUST00000133354,ENSMUST00000154231_5end
|cluster_id=chr2:29980049..29980107,-
|description=CAGE_peak_1_at_Zer1_5end
|description=CAGE_peak_1_at_Zer1_5end
|id=chr2:29980049..29980107,-
|id=chr2:29980049..29980107,-
|ontology_enrichment_celltype=CL:0000117!3.83e-11!23;CL:0000337!3.83e-11!23;CL:0000540!1.08e-10!33;CL:0000047!1.08e-10!33;CL:0000031!1.08e-10!33;CL:0000404!1.08e-10!33;CL:0002319!9.33e-10!43;CL:0000221!3.65e-09!44;CL:0000133!3.65e-09!44;CL:0000393!9.18e-07!39;CL:0000211!9.18e-07!39
|ontology_enrichment_celltype=CL:0000117!3.83e-11!23;CL:0000337!3.83e-11!23;CL:0000540!1.08e-10!33;CL:0000047!1.08e-10!33;CL:0000031!1.08e-10!33;CL:0000404!1.08e-10!33;CL:0002319!9.33e-10!43;CL:0000221!3.65e-09!44;CL:0000133!3.65e-09!44;CL:0000393!9.18e-07!39;CL:0000211!9.18e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.83e-11,23;CL:0000337,3.83e-11,23;CL:0000540,1.08e-10,33;CL:0000047,1.08e-10,33;CL:0000031,1.08e-10,33;CL:0000404,1.08e-10,33;CL:0002319,9.33e-10,43;CL:0000221,3.65e-09,44;CL:0000133,3.65e-09,44;CL:0000393,9.18e-07,39;CL:0000211,9.18e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.86e-28!73;UBERON:0005743!1.86e-28!73;UBERON:0000073!3.41e-26!75;UBERON:0001016!3.41e-26!75;UBERON:0001049!2.46e-23!52;UBERON:0005068!2.46e-23!52;UBERON:0006241!2.46e-23!52;UBERON:0007135!2.46e-23!52;UBERON:0000955!5.57e-23!50;UBERON:0006238!5.57e-23!50;UBERON:0007811!6.91e-23!86;UBERON:0000153!1.11e-22!94;UBERON:0002616!2.37e-22!49;UBERON:0002346!3.82e-22!71;UBERON:0003075!3.82e-22!71;UBERON:0007284!3.82e-22!71;UBERON:0000033!4.87e-22!63;UBERON:0004121!7.34e-22!102;UBERON:0000924!7.34e-22!102;UBERON:0006601!7.34e-22!102;UBERON:0003056!8.59e-19!49;UBERON:0003080!1.46e-17!40;UBERON:0002780!7.48e-17!39;UBERON:0001890!7.48e-17!39;UBERON:0006240!7.48e-17!39;UBERON:0002020!2.19e-16!34;UBERON:0002791!4.21e-14!29;UBERON:0003528!4.21e-14!29;UBERON:0001893!4.21e-14!29;UBERON:0000956!6.44e-10!21;UBERON:0001869!6.44e-10!21;UBERON:0000203!6.44e-10!21;UBERON:0002619!8.44e-09!17;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.86e-28,73;UBERON:0001016,3.41e-26,75;UBERON:0000073,7.03e-25,54;UBERON:0002346,2.68e-24,64;UBERON:0003075,2.68e-24,64;UBERON:0007284,2.68e-24,64;UBERON:0001049,2.46e-23,52;UBERON:0005068,2.46e-23,52;UBERON:0006241,2.46e-23,52;UBERON:0007135,2.46e-23,52;UBERON:0004121,3.54e-23,95;UBERON:0000924,3.54e-23,95;UBERON:0006601,3.54e-23,95;UBERON:0000955,7.05e-21,47;UBERON:0006238,7.05e-21,47;UBERON:0002616,2.91e-20,46;UBERON:0010371,3.50e-19,73;UBERON:0003056,8.59e-19,49;UBERON:0003080,1.46e-17,40;UBERON:0002780,7.48e-17,39;UBERON:0001890,7.48e-17,39;UBERON:0006240,7.48e-17,39;UBERON:0002020,2.19e-16,34;UBERON:0003528,4.21e-14,29;UBERON:0002791,4.21e-14,29;UBERON:0001893,4.21e-14,29;UBERON:0010314,6.23e-14,92;UBERON:0000956,6.44e-10,21;UBERON:0001869,6.44e-10,21;UBERON:0000203,6.44e-10,21;UBERON:0002619,8.44e-09,17;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10
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0.3685127188929,12.7543860568826,13.538478952263,12.812112906558,12.3980183588004,8.11443420150492,8.68420321055012,16.776161453347,88.4997913734179,15.5497207885738,9.26567546559747,16.5283510092441,11.8827037599513,12.164841035336,16.3126561717598,13.2808472540829,17.406651174668,38.653459332161,40.0361708698433,49.613745938624,15.8125667926328,22.3909886619323,22.6062231981363,31.1506450461418,32.5837421841274,31.2508168751919,31.4578692881849,30.8957336841332,42.2185708868699,39.7255169439152,38.203489249983,41.6597274302627,58.0878203842398,11.5632495643758,5.77163478772568,2.42227412845584,4.02923079273788,14.6824091464465,9.00875882165674,10.8059458317686,13.9339446401393,14.5455910170255,81.3242653368576,105.874804396651,104.26698344597,115.313485352614,118.519275920321,123.129205274521,119.47898254103,109.87837358671,129.145586560498,124.780235132189,12.1431196673487,19.9512436700516,18.2684958156924,12.398442570483,17.6075056607505,17.2812897943013,18.6687251353357,19.1612603232172,21.5015870426516,16.4253187646468,20.7853025909997,18.6740077972215,16.0126977773499,14.3416341386907,14.9906573974151,18.0991602687568,15.2967310247209,11.9603716687497,15.2471783297223,16.1918812147837,17.8292011240416,16.6827257789777,12.637118067208,18.4589949123057,15.5280477685296,15.8229316757435,15.3659497213129,15.7841826862706,12.3581743599734,17.3954104213899,17.6766177005019,16.0562306272168,15.1415485972785,13.634442024365,18.1332214322273,27.2293529952361,18.0127338502964,16.9748132698156,18.5549682106778,13.2354851471709,12.9845987947436
|phase1_expression=12.9720566154883,4.88565570695105,3.63999391511629,3.0246421130683,2.00358291978539,4.36486106970913,5.13947809310157,56.1686456970857,3.51971805379167,3.5109678948299,5.99262888789267,3.58974715479014,36.4657554753468,41.4372707466048,17.3217076144145,14.1732687172878,16.0899231969474,49.6852910439224,48.1271661956143,56.01943403734,26.9587229778891,22.0425911665965,16.194386926614,5.27974995218242,4.5881856213434,2.8711598205751,1.7230479846363,1.50829862880122,3.04037471130198,3.52842181663903,2.66076612786366,15.2407361630311,18.4519436275371,0,4.33277429626912,4.3221007793208,4.49172583777212,22.600708059793,7.813353445238,16.2292360631877,28.2351114254887,29.3709558532132,18.934903768215,7.67970589651021,8.31290836000019,6.24058957349717,32.0780451182696,17.6600376668162,12.7417985985994,18.2764105129826,18.4782076545479,21.5628846547457,24.4962604844295,31.9159342484992,29.2401605253944,7.46052364504246,12.0344044774278,11.3447860301037,45.5212036934095,49.7251520515711,45.0020296489387,9.14880236586657,20.4537803105562,14.8483453351431,12.8552627133707,17.7620028736525,19.4740071836963,24.5899715405795,20.6342328493871,22.5459917013923,24.6080204781117,47.989365379839,48.3702104684034,30.1327366068787,26.1658135879785,37.6879702510109,135.442533629248,93.0840694641018,106.602934079833,50.9081070638548,38.4248103130121,36.4639359389732,92.1303896704557,100.171744585639,106.80597519599,48.6137166031552,40.7183007085434,38.7710847316625,1.96888102666279,8.53958629206676,8.40607017234866,3.44169550792555,3.39985666853875,3.77792234146472,3.24888208723835,4.03224198387602,11.2355536105401,4.26075806445144,3.89679006904303,2.12003744706204,9.71819596459095,8.98285341900225,12.7402619853323,14.2213340630666,2.59789249213457,3.04031838570118,2.02209778005913,10.7332846935916,33.4029869904852,20.336573051881,11.7970022200972,16.1366703505435,14.7593918243877,12.8114244469729,17.9910721917628,10.1789938977037,16.3148678704687,7.66376591675532,12.3845477272982,12.1325137460557,13.0296495891632,12.6067565815158,11.1835056730873,64.9973369365635,67.4418395939325,10.9846533739694,11.8616973260861,10.7982491578813,9.14905634926066,125.224974542432,107.970142265196,47.3716907465499,95.0819031451752,87.9661173216337,97.2448048538741,90.0439010026055,11.915205570487,16.1729061793121,17.4378703319236,26.7261156975822,16.7855371421888,15.8632452059096,13.6847218652065,19.7423311364787,30.6844611172489,26.9038812598185,28.672727715277,54.5864112259323,12.7185115830377,13.0483195315795,18.6508191613786,17.9740500590611,16.6828349535359,16.3678518265418,14.404749548556,13.335295876839,12.6398373716382,13.1247432628505,12.5031939734061,11.8061690345236,13.1334593589414,10.2635375032778,16.5721314909647,12.3961466000864,10.4901636763417,12.0917651270212,12.8771232671817,17.8650973821769,11.6837493438571,13.790066982644,14.3491792896165,14.7661987299586,10.3188554186794,16.1047702512446,99.0465657737039,31.3859067756818,9.91256348951394,5.28901133327089,18.1295012954949,13.7019636397659,16.2373001265838,8.87407508342707,10.4517680607089,14.2669219584419,8.0669940462567,12.5171205590248,13.8234364840148,15.9165177632921,14.2323783596958,7.19055526923377,6.26800344636613,10.7536287557358,13.6560888686219,14.9665551518745,14.6520056375005,13.2373363099454,17.2617713579187,18.3755848112635,15.7458977439401,9.00421902675573,8.63493003127561,8.51440431060424,1.1858105083486,15.1829046201646,12.1866576970186,15.0657615297852,12.9830477688642,12.5412123071257,7.63877555344259,7.48009957372108,10.3766545136023,3.84385978463314,8.62609239164127,7.81495990103857,7.80094182786401,3.78868316920668,4.12614051100398,2.8946611281802,19.7685913478267,9.66406200029472,12.711268162478,12.0519010900384,13.6120344007331,22.1108259823197,21.9000149615133,13.6593553500459,16.3940549870439,17.2742457926044,15.6265673284337,14.0922450655535,11.3972088031491,14.4649058581512,12.0633027151418,3.26343410291226,11.8023425524569,13.2449638226272,80.275294993896,68.0999899100701,6.88526770582037,13.8859009962405,15.4599027513966,13.2749173060857,24.9891141370047,16.010909462821,18.4922899488387,20.0984336860071,18.2164815753702,25.1340037803728,25.2984177885775,82.2582570039826,15.1875891172847,18.16269157406,16.125808976004,15.6721616823909,13.2745138339963,13.8384962608339,12.09294227859,11.127699705598,14.4697927511579,13.2197113615889,11.8877014857382,12.7236805317127,9.26893183800275,10.4292130118819,15.8127912862498,9.28219889233682,51.0659408630682,16.5656206508805,17.9808570458029,17.361299837559,23.9409315417069,24.2581591938816,25.834196234533,51.4545764003673,9.85621173867584,18.4293901651524,8.82113592219848,11.0473789470792,15.5005849628069,10.7357006372117,13.0115854963419,11.6540038818993,8.16146342563582,58.9652460393421,19.6501512917531,17.1301100409475,12.7784223885101,16.7647926734175,15.7198361879179,21.0475919350001,12.4084253895514,12.0358248998346,12.2997976685937,5.72802370809068,19.2964956084493,14.84232110026,10.3685127188929,12.7543860568826,13.538478952263,12.812112906558,12.3980183588004,8.11443420150492,8.68420321055012,16.776161453347,88.4997913734179,15.5497207885738,9.26567546559747,16.5283510092441,11.8827037599513,12.164841035336,16.3126561717598,13.2808472540829,17.406651174668,38.653459332161,40.0361708698433,49.613745938624,15.8125667926328,22.3909886619323,22.6062231981363,31.1506450461418,32.5837421841274,31.2508168751919,31.4578692881849,30.8957336841332,42.2185708868699,39.7255169439152,38.203489249983,41.6597274302627,58.0878203842398,11.5632495643758,5.77163478772568,2.42227412845584,4.02923079273788,14.6824091464465,9.00875882165674,10.8059458317686,13.9339446401393,14.5455910170255,81.3242653368576,105.874804396651,104.26698344597,115.313485352614,118.519275920321,123.129205274521,119.47898254103,109.87837358671,129.145586560498,124.780235132189,12.1431196673487,19.9512436700516,18.2684958156924,12.398442570483,17.6075056607505,17.2812897943013,18.6687251353357,19.1612603232172,21.5015870426516,16.4253187646468,20.7853025909997,18.6740077972215,16.0126977773499,14.3416341386907,14.9906573974151,18.0991602687568,15.2967310247209,11.9603716687497,15.2471783297223,16.1918812147837,17.8292011240416,16.6827257789777,12.637118067208,18.4589949123057,15.5280477685296,15.8229316757435,15.3659497213129,15.7841826862706,12.3581743599734,17.3954104213899,17.6766177005019,16.0562306272168,15.1415485972785,13.634442024365,18.1332214322273,27.2293529952361,18.0127338502964,16.9748132698156,18.5549682106778,13.2354851471709,12.9845987947436
|short_description=p1@Zer1
|short_description=p1@Zer1
}}
}}

Latest revision as of 12:51, 26 September 2015

Short description:p1@Zer1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zer1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000113677, ENSMUST00000133354, ENSMUST00000154231_5end
EntrezGene:Zer1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zer1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E956.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E436.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.17
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A249.69
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A656.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H229.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.24
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C345.52
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C745.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C819.47
Mouse Microglia, donor2.CNhs12634.11736-123E824.59
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.55
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D548.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D637.69
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F393.08
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7106.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D450.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E492.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5100.17
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6106.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F98.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.73
accessory axillary lymph node, adult.CNhs10475.1063-29H933.40
adrenal gland, adult.CNhs10508.49-24D720.34
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I114.76
adrenal gland, embryo E18.CNhs11026.1262-18F512.81
adrenal gland, neonate N00.CNhs11191.1311-23C117.99
adrenal gland, neonate N25.CNhs11223.1377-27I310.18
amnion, adult pregnant day17.5.CNhs10488.583-22A816.31
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F512.13
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B265.00
cerebellum, neonate N30.CNhs11135.1395-42I267.44
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.86
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.15
corpora quadrigemina, adult.CNhs10501.16-22A4125.22
corpus striatum, adult.CNhs10487.19-21D8107.97
corpus striatum, neonate N00.CNhs11226.630-43F147.37
cortex, adult.CNhs10473.12-14D595.08
cortex, neonate N30.CNhs11107.1392-42F287.97
diencephalon, adult.CNhs10482.20-12F297.24
diencephalon, neonate N30.CNhs11201.1388-42B290.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.17
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G426.73
eyeball, embryo E12.CNhs11016.345-16C616.79
eyeball, embryo E14.CNhs10521.399-16E215.86
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D419.74
eyeball, neonate N00.CNhs11207.633-15C630.68
eyeball, neonate N01.CNhs11140.1532-43E726.90
eyeball, neonate N02.CNhs11205.1551-44G828.67
eyeball, neonate N16.CNhs11188.777-19A254.59
forelimb, embryo E11.CNhs10596.335-25E212.72
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E218.65
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E716.68
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B514.40
gonad, embryo E13.CNhs11044.1564-45I613.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C812.40
heart, embryo E16.CNhs11021.457-17C610.49
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G312.88
heart, neonate N00.CNhs11213.639-21E317.87
heart, neonate N03.CNhs11221.1349-25I211.68
heart, neonate N10.CNhs11118.749-24G113.79
heart, neonate N16.CNhs11209.782-15G114.35
heart, neonate N20.CNhs11127.821-26I614.77
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D216.10
hippocampus, adult.CNhs10478.13-16E899.05
hippocampus, neonate N00.CNhs11228.627-43G131.39
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I518.13
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F714.27
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B813.82
intestine, neonate N07.CNhs11095.720-20F215.92
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F814.97
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I213.24
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G718.38
kidney, neonate N10.CNhs11206.758-6D515.75
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H18.51
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F815.18
liver, embryo E13.CNhs10524.378-3H612.19
liver, embryo E14.CNhs10594.409-16E115.07
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C512.05
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A622.11
lung, embryo E18.CNhs10583.1287-20I621.90
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E615.63
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C711.40
lung, neonate N30.CNhs11133.1394-42H214.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C280.28
medulla oblongata, neonate N30.CNhs11200.1396-42A368.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.46
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.13
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.30
olfactory brain, adult.CNhs10489.18-22I982.26
ovary, adult.CNhs10507.91-2I715.19
ovary, embryo E18.CNhs11040.505-44H718.16
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E511.13
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G851.07
pituitary gland, embryo E12.CNhs11018.346-16E616.57
pituitary gland, embryo E13.CNhs11009.370-44C717.98
pituitary gland, embryo E14.CNhs11037.398-44A517.36
pituitary gland, embryo E15.CNhs10592.427-16B923.94
pituitary gland, embryo E16.CNhs11036.449-43F624.26
pituitary gland, embryo E17.CNhs11039.1265-44F525.83
pituitary gland, neonate N00.CNhs11190.1308-22E951.45
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G318.43
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G415.50
skin, neonate N03.CNhs11215.662-22H310.74
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C411.65
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C958.97
spleen, adult.CNhs10465.25-2G219.65
spleen, embryo E16.CNhs11035.461-43C117.13
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D116.76
spleen, neonate N20.CNhs11112.824-19H115.72
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.30
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E319.30
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D410.37
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B812.81
stomach, neonate N07.CNhs11210.718-18A912.40
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I18.68
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G588.50
testis, embryo E13.CNhs11031.389-23F515.55
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I511.88
testis, embryo E18.CNhs11027.503-18G512.16
testis, neonate N00.CNhs11189.1300-22B716.31
testis, neonate N07.CNhs11222.726-26I413.28
testis, neonate N10.CNhs11204.763-44D917.41
testis, neonate N20.CNhs11110.839-18H338.65
testis, neonate N30.CNhs11130.1391-42E240.04
thymus, adult.CNhs10471.38-12B549.61
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I222.39
thymus, embryo E16.CNhs11002.456-26C522.61
thymus, embryo E17.CNhs10581.478-18C131.15
thymus, embryo E18.CNhs10595.1273-19G432.58
thymus, neonate N02.CNhs11181.1541-43F831.25
thymus, neonate N03.CNhs11137.2104-43C731.46
thymus, neonate N06.CNhs11197.681-26C430.90
thymus, neonate N07.CNhs11211.713-19D342.22
thymus, neonate N10.CNhs11194.748-24E439.73
thymus, neonate N20.CNhs11186.820-7A238.20
thymus, neonate N25.CNhs11125.1362-25G741.66
thymus, neonate N30.CNhs11132.1393-42G258.09
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E414.68
uterus, adult pregnant day19.CNhs10497.590-15F59.01
uterus, adult.CNhs10509.92-27E510.81
vagina, adult.CNhs10502.89-27D513.93
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2105.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3104.27
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7115.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4118.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5123.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6119.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7109.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8129.15
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9124.78
whole body, embryo E11.CNhs11014.324-5I812.14
whole body, embryo E12.CNhs10587.857-27C919.95
whole body, embryo E13.CNhs10512.372-23H218.27
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B117.61
whole body, embryo E16.CNhs10514.453-14F217.28
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.63
whole body, embryo E17.5.CNhs10513.490-9F918.13
whole body, embryo E17.CNhs10517.475-3I527.23
whole body, embryo E18.CNhs10516.493-3B318.01
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C618.55
whole body, neonate N06.CNhs10515.692-21D113.24
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.83e-1123
neuroblast (sensu Vertebrata)3.83e-1123
neuron1.08e-1033
neuronal stem cell1.08e-1033
neuroblast1.08e-1033
electrically signaling cell1.08e-1033
neural cell9.33e-1043
ectodermal cell3.65e-0944
neurectodermal cell3.65e-0944
electrically responsive cell9.18e-0739
electrically active cell9.18e-0739

Uber anatomy
Ontology termp-valuen
central nervous system1.86e-2873
nervous system3.41e-2675
regional part of nervous system7.03e-2554
neurectoderm2.68e-2464
neural plate2.68e-2464
presumptive neural plate2.68e-2464
neural tube2.46e-2352
neural rod2.46e-2352
future spinal cord2.46e-2352
neural keel2.46e-2352
ectoderm-derived structure3.54e-2395
ectoderm3.54e-2395
presumptive ectoderm3.54e-2395
brain7.05e-2147
future brain7.05e-2147
regional part of brain2.91e-2046
ecto-epithelium3.50e-1973
pre-chordal neural plate8.59e-1949
anterior neural tube1.46e-1740
regional part of forebrain7.48e-1739
forebrain7.48e-1739
future forebrain7.48e-1739
gray matter2.19e-1634
brain grey matter4.21e-1429
regional part of telencephalon4.21e-1429
telencephalon4.21e-1429
structure with developmental contribution from neural crest6.23e-1492
cerebral cortex6.44e-1021
cerebral hemisphere6.44e-1021
pallium6.44e-1021
regional part of cerebral cortex8.44e-0917
occipital lobe6.12e-0810
visual cortex6.12e-0810
neocortex6.12e-0810
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