FFCP PHASE1:Mm9::chr2:30214798..30214861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227700 | |EntrezGene=227700 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |MCL_coexpression_id=20 | ||
|TSSclassifier=NA | |||
|UniProt=Q8R3V5,A2AWI7,F2Z4A8 | |UniProt=Q8R3V5,A2AWI7,F2Z4A8 | ||
|association_with_transcript=0bp_to_ENSMUST00000028214,ENSMUST00000113621,ENSMUST00000128387,ENSMUST00000151354_5end | |association_with_transcript=0bp_to_ENSMUST00000028214,ENSMUST00000113621,ENSMUST00000128387,ENSMUST00000151354_5end | ||
|cluster_id=chr2:30214798..30214861,- | |||
|description=CAGE_peak_2_at_Sh3glb2_5end | |description=CAGE_peak_2_at_Sh3glb2_5end | ||
|id=chr2:30214798..30214861,- | |id=chr2:30214798..30214861,- | ||
|ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0002319!2.18e-08!43;CL:0000221!2.19e-08!44;CL:0000133!2.19e-08!44 | |ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0002319!2.18e-08!43;CL:0000221!2.19e-08!44;CL:0000133!2.19e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-10,23;CL:0000337,1.01e-10,23;CL:0002319,2.18e-08,43;CL:0000221,2.19e-08,44;CL:0000133,2.19e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.61e-21!73;UBERON:0005743!3.61e-21!73;UBERON:0001049!8.89e-21!52;UBERON:0005068!8.89e-21!52;UBERON:0006241!8.89e-21!52;UBERON:0007135!8.89e-21!52;UBERON:0000073!2.77e-20!75;UBERON:0001016!2.77e-20!75;UBERON:0000955!3.55e-20!50;UBERON:0006238!3.55e-20!50;UBERON:0002616!1.02e-19!49;UBERON:0000033!2.46e-17!63;UBERON:0004121!6.70e-17!102;UBERON:0000924!6.70e-17!102;UBERON:0006601!6.70e-17!102;UBERON:0002346!3.69e-15!71;UBERON:0003075!3.69e-15!71;UBERON:0007284!3.69e-15!71;UBERON:0002020!3.73e-15!34;UBERON:0003080!2.99e-14!40;UBERON:0007811!6.09e-14!86;UBERON:0002780!1.19e-13!39;UBERON:0001890!1.19e-13!39;UBERON:0006240!1.19e-13!39;UBERON:0002791!6.91e-13!29;UBERON:0003528!6.91e-13!29;UBERON:0001893!6.91e-13!29;UBERON:0003056!6.63e-12!49;UBERON:0000153!8.98e-10!94;UBERON:0000956!1.85e-08!21;UBERON:0001869!1.85e-08!21;UBERON:0000203!1.85e-08!21;UBERON:0002619!4.73e-08!17;UBERON:0000064!5.35e-08!99;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!3.61e-21!73;UBERON:0005743!3.61e-21!73;UBERON:0001049!8.89e-21!52;UBERON:0005068!8.89e-21!52;UBERON:0006241!8.89e-21!52;UBERON:0007135!8.89e-21!52;UBERON:0000073!2.77e-20!75;UBERON:0001016!2.77e-20!75;UBERON:0000955!3.55e-20!50;UBERON:0006238!3.55e-20!50;UBERON:0002616!1.02e-19!49;UBERON:0000033!2.46e-17!63;UBERON:0004121!6.70e-17!102;UBERON:0000924!6.70e-17!102;UBERON:0006601!6.70e-17!102;UBERON:0002346!3.69e-15!71;UBERON:0003075!3.69e-15!71;UBERON:0007284!3.69e-15!71;UBERON:0002020!3.73e-15!34;UBERON:0003080!2.99e-14!40;UBERON:0007811!6.09e-14!86;UBERON:0002780!1.19e-13!39;UBERON:0001890!1.19e-13!39;UBERON:0006240!1.19e-13!39;UBERON:0002791!6.91e-13!29;UBERON:0003528!6.91e-13!29;UBERON:0001893!6.91e-13!29;UBERON:0003056!6.63e-12!49;UBERON:0000153!8.98e-10!94;UBERON:0000956!1.85e-08!21;UBERON:0001869!1.85e-08!21;UBERON:0000203!1.85e-08!21;UBERON:0002619!4.73e-08!17;UBERON:0000064!5.35e-08!99;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.41e-22,54;UBERON:0001017,3.61e-21,73;UBERON:0001049,8.89e-21,52;UBERON:0005068,8.89e-21,52;UBERON:0006241,8.89e-21,52;UBERON:0007135,8.89e-21,52;UBERON:0001016,2.77e-20,75;UBERON:0000955,4.20e-18,47;UBERON:0006238,4.20e-18,47;UBERON:0002616,1.18e-17,46;UBERON:0004121,1.55e-17,95;UBERON:0000924,1.55e-17,95;UBERON:0006601,1.55e-17,95;UBERON:0002346,3.36e-16,64;UBERON:0003075,3.36e-16,64;UBERON:0007284,3.36e-16,64;UBERON:0010314,6.57e-16,92;UBERON:0010371,1.60e-15,73;UBERON:0002020,3.73e-15,34;UBERON:0003080,2.99e-14,40;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0003528,6.91e-13,29;UBERON:0002791,6.91e-13,29;UBERON:0001893,6.91e-13,29;UBERON:0003056,6.63e-12,49;UBERON:0000956,1.85e-08,21;UBERON:0001869,1.85e-08,21;UBERON:0000203,1.85e-08,21;UBERON:0002619,4.73e-08,17;UBERON:0003076,2.06e-07,12;UBERON:0003057,2.06e-07,12 | |||
|phase1_expression=6.24580503708696,13.2610654902957,11.3749809847384,17.5429242557961,12.0214975187123,5.54001597309236,3.27057696833736,5.55230290798778,0.84473233291,0.70219357896598,0.513653904676515,1.11681022593471,6.67682846731702,7.34331380319578,3.66420737997229,2.02475267389826,2.79824751251259,5.8360500591274,5.21034847701807,5.09267582157636,7.48380953329414,5.56029326724958,3.6567970479451,6.39969691173627,6.42345986988076,11.4846392823004,6.03066794622705,6.67960821326256,5.13063232532209,8.06496415231778,5.32153225572731,4.44521471421742,5.53558308826113,31.6963362030877,2.88851619751275,4.82080471539628,6.32925004413344,6.27797446105362,3.906676722619,2.09409497589519,4.1176204162171,2.73218193983378,5.34061388334269,2.01434908760924,2.73717714292689,3.67093504323363,12.5182615095686,10.0291571935005,14.4992880604751,14.7766723296455,11.8988458381558,14.3752564364972,5.5368259999053,9.42970784614748,4.7053131879945,6.94600477297057,2.57880095944881,3.6097046459421,12.7459370341547,8.46385566835253,12.0427966666174,10.8430250262122,16.0073063300005,22.0475430733943,10.8775299882367,22.0248835633291,16.7776061890307,23.4373166246148,8.08778976006126,6.07526722492608,5.67877395648731,19.9955689082663,18.1112203580323,7.96190194897201,10.9263836960789,8.27296907949019,20.9220173898839,26.558966321719,31.4893393175299,12.6610836220986,16.8337264228434,11.9810075228055,40.7607178542016,26.449842671489,31.9348337853533,10.0173719061047,12.2439645487229,7.82877672466262,4.16494063332512,4.6854367266207,2.6087803983151,5.16254326188832,4.0798280022465,9.17495425784289,6.49776417447669,3.13618820968135,6.46044332606059,6.98764322570037,5.19572009205738,6.36011234118612,6.05626705039726,3.84979432242953,2.54805239706646,21.3320010945999,4.5463118612355,4.05375784760158,4.04419556011827,5.709193985953,1.55362730188303,8.01587550950054,5.20455980298408,4.56698217468212,4.15107895060905,4.06951129492081,5.17390311397101,8.54532821041793,3.70792451601561,5.92857363371638,2.65383165584962,5.17653919831709,4.19598885074748,2.90925151881133,16.775258509631,19.0307518057506,21.154117388159,8.43008282188352,3.95389910869537,5.39912457894067,4.44745794755726,19.7723644014366,16.0125210986519,12.5654352112864,15.1227158567281,17.3886510984625,19.3242881440391,18.6577452527921,3.56437773476107,3.6078021476927,6.06534620240819,7.99679052368601,3.6433724029557,4.59804208866946,5.40186389416048,3.76762044589288,6.25935792192216,4.22775276940004,7.21503279109912,5.17406741478031,2.37124792226126,2.08016688184601,2.81521798662318,3.06874025398605,3.61461423993277,3.83077383174383,4.11564272815887,4.37875387000685,4.21327912387941,3.60287069960601,3.6941254921427,5.17814431338755,7.27030785941398,7.02242039697958,4.97163944728941,5.90292695242211,6.63348585415727,6.27841650826101,8.04820204198858,7.23945122676451,8.06343264576054,5.41752631461014,7.62046809731044,7.74859933354261,5.92785311285837,6.84452735677896,14.930586348053,7.9236551532049,10.5734010554815,6.61126416658861,2.34617075588757,1.85789337488351,3.47942145569652,2.62188582010345,3.55804870151792,6.27744566171445,8.54152310780121,3.12928013975621,7.79139147280835,8.55512829776949,4.48417400373976,8.08937467788799,7.3486936957396,6.57166201739412,2.0863469104839,2.51346727741403,1.1270773567308,2.44381593414377,4.07300223052014,3.43665517462561,5.24863258131335,4.57591458736767,5.49495547444812,4.68909222902842,5.33614728756868,1.50160595144485,3.14494392181125,1.12431056192427,2.63718157805054,2.17059443777175,3.56476192493988,3.74004978686054,2.10775794807546,1.64736847912849,1.43768206527355,4.09355042435354,4.99260276983297,3.78868316920668,3.94674309748207,2.41221760681684,4.43407656399851,3.03186258832776,4.07412441105065,2.37643120085263,2.81628297946203,3.68513766371995,4.76087281772027,4.87834119644497,2.83743259391144,4.87222317227305,3.6674596791222,4.09658286789345,6.38934432903814,5.78596234326046,6.03165135757089,4.35124547054968,5.90117127622843,5.24279817978992,23.4403861382176,20.5120451536356,2.78689407140348,6.81671503451807,3.15508219416257,3.51394869866975,4.95473814785438,3.10659437338318,4.23317480756549,5.66153061577665,3.23848561339915,5.26060544240361,3.55759000151871,11.2462460747632,4.82596289708113,4.45164009168138,4.39794790254655,4.12425307431339,3.98235415019888,3.64170954232472,2.41858845571801,5.28094223316515,6.496641643377,4.61152721915891,4.39328098385976,4.72593848320757,4.63446591900138,4.10847785316561,4.21674434299995,9.28219889233682,10.5536277783674,3.78128297465751,7.37344497561701,5.35842587578981,5.14286677562593,6.95638388648075,6.41741180348272,10.9607381681256,3.75474732901937,4.44847348814022,6.61585194164886,6.76033637060068,3.87514624070173,4.52346936961169,6.92359595218192,6.72977688954751,6.70405924248657,25.9595422814714,2.9048049735635,3.50857675537478,2.59272338317596,4.1441060541032,3.00727300986255,3.88922894451088,5.09935289981566,4.05859211738608,4.69879910935041,8.59203556213602,4.11236791655476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| ||
|short_description=p2@Sh3glb2 | |short_description=p2@Sh3glb2 | ||
}} | }} |
Latest revision as of 13:01, 26 September 2015
Short description: | p2@Sh3glb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3glb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000028214, ENSMUST00000113621, ENSMUST00000128387, ENSMUST00000151354_5end |
EntrezGene: | Sh3glb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-10 | 23 |
neural cell | 2.18e-08 | 43 |
ectodermal cell | 2.19e-08 | 44 |
neurectodermal cell | 2.19e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.41e-22 | 54 |
central nervous system | 3.61e-21 | 73 |
neural tube | 8.89e-21 | 52 |
neural rod | 8.89e-21 | 52 |
future spinal cord | 8.89e-21 | 52 |
neural keel | 8.89e-21 | 52 |
nervous system | 2.77e-20 | 75 |
brain | 4.20e-18 | 47 |
future brain | 4.20e-18 | 47 |
regional part of brain | 1.18e-17 | 46 |
ectoderm-derived structure | 1.55e-17 | 95 |
ectoderm | 1.55e-17 | 95 |
presumptive ectoderm | 1.55e-17 | 95 |
neurectoderm | 3.36e-16 | 64 |
neural plate | 3.36e-16 | 64 |
presumptive neural plate | 3.36e-16 | 64 |
structure with developmental contribution from neural crest | 6.57e-16 | 92 |
ecto-epithelium | 1.60e-15 | 73 |
gray matter | 3.73e-15 | 34 |
anterior neural tube | 2.99e-14 | 40 |
regional part of forebrain | 1.19e-13 | 39 |
forebrain | 1.19e-13 | 39 |
future forebrain | 1.19e-13 | 39 |
brain grey matter | 6.91e-13 | 29 |
regional part of telencephalon | 6.91e-13 | 29 |
telencephalon | 6.91e-13 | 29 |
pre-chordal neural plate | 6.63e-12 | 49 |
cerebral cortex | 1.85e-08 | 21 |
cerebral hemisphere | 1.85e-08 | 21 |
pallium | 1.85e-08 | 21 |
regional part of cerebral cortex | 4.73e-08 | 17 |
posterior neural tube | 2.06e-07 | 12 |
chordal neural plate | 2.06e-07 | 12 |