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FFCP PHASE1:Mm9::chr6:122290218..122290262,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:122290218..122290262,-
|DHSsupport=NA
|short_description=p3@Phc1
|DPIdataset=NA
|description=CAGE_peak_3_at_Phc1_5end
|association_with_transcript=0bp_to_ENSMUST00000159384,uc009dpb.1_5end
|EntrezGene=13619
|EntrezGene=13619
|HGNC=
|HGNC=
|MCL_coexpression_id=335
|TSSclassifier=NA
|UniProt=E0CXC9
|UniProt=E0CXC9
|association_with_transcript=0bp_to_ENSMUST00000159384,uc009dpb.1_5end
|cluster_id=chr6:122290218..122290262,-
|description=CAGE_peak_3_at_Phc1_5end
|id=chr6:122290218..122290262,-
|ontology_enrichment_celltype=CL:0000540!2.97e-10!33;CL:0000047!2.97e-10!33;CL:0000031!2.97e-10!33;CL:0000404!2.97e-10!33;CL:0000221!2.76e-09!44;CL:0000133!2.76e-09!44;CL:0002319!3.72e-09!43;CL:0000117!8.13e-08!23;CL:0000337!8.13e-08!23;CL:0000393!1.68e-07!39;CL:0000211!1.68e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000221,1.41e-09,44;CL:0000133,1.41e-09,44;CL:0002319,2.10e-09,43;CL:0000117,9.39e-09,23;CL:0000337,9.39e-09,23;CL:0000393,3.81e-08,39;CL:0000211,3.81e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.20e-21!73;UBERON:0005743!1.20e-21!73;UBERON:0003056!2.93e-21!49;UBERON:0002346!1.57e-20!71;UBERON:0003075!1.57e-20!71;UBERON:0007284!1.57e-20!71;UBERON:0000073!2.53e-20!75;UBERON:0001016!2.53e-20!75;UBERON:0004121!2.53e-19!102;UBERON:0000924!2.53e-19!102;UBERON:0006601!2.53e-19!102;UBERON:0000033!3.60e-19!63;UBERON:0002780!1.46e-17!39;UBERON:0001890!1.46e-17!39;UBERON:0006240!1.46e-17!39;UBERON:0003080!1.79e-17!40;UBERON:0001049!8.94e-17!52;UBERON:0005068!8.94e-17!52;UBERON:0006241!8.94e-17!52;UBERON:0007135!8.94e-17!52;UBERON:0000955!2.36e-16!50;UBERON:0006238!2.36e-16!50;UBERON:0002616!5.78e-16!49;UBERON:0002020!5.50e-13!34;UBERON:0002791!1.13e-12!29;UBERON:0003528!1.13e-12!29;UBERON:0001893!1.13e-12!29;UBERON:0000153!9.15e-12!94;UBERON:0007811!3.70e-10!86;UBERON:0000956!6.88e-10!21;UBERON:0001869!6.88e-10!21;UBERON:0000203!6.88e-10!21;UBERON:0002619!1.18e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.16e-23,49;UBERON:0001017,6.28e-21,73;UBERON:0002346,1.08e-20,64;UBERON:0003075,1.08e-20,64;UBERON:0007284,1.08e-20,64;UBERON:0001016,8.67e-20,75;UBERON:0002780,1.20e-19,39;UBERON:0001890,1.20e-19,39;UBERON:0006240,1.20e-19,39;UBERON:0004121,1.56e-19,95;UBERON:0000924,1.56e-19,95;UBERON:0006601,1.56e-19,95;UBERON:0003080,8.81e-19,40;UBERON:0010371,2.50e-17,73;UBERON:0000955,5.53e-16,47;UBERON:0006238,5.53e-16,47;UBERON:0002616,1.68e-15,46;UBERON:0000073,2.79e-15,54;UBERON:0001049,5.11e-15,52;UBERON:0005068,5.11e-15,52;UBERON:0006241,5.11e-15,52;UBERON:0007135,5.11e-15,52;UBERON:0010314,3.57e-14,92;UBERON:0003528,4.51e-14,29;UBERON:0002791,4.51e-14,29;UBERON:0001893,4.51e-14,29;UBERON:0002020,7.92e-14,34;UBERON:0000956,1.50e-10,21;UBERON:0001869,1.50e-10,21;UBERON:0000203,1.50e-10,21;UBERON:0002619,9.85e-08,17;UBERON:0000007,3.47e-07,8;UBERON:0003296,3.47e-07,8;UBERON:0010133,3.47e-07,8
|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0.782391344348039,1.96222640742402,0.878744730937887,0.777719596297134,1.1198913730029,2.87505128729943,0,0,0,0,0,0.515672092277442,7.48570905180512,3.1739458756322,3.1691570175309,1.0165335962074,0,0,0,0,0,1.53687322128622,4.14758449233911,3.78016627328734,5.46844899513593,0.285650984403804,1.76694832761291,4.16468717330844,6.13411014516713,2.75765635983006,1.10115880999389,0.383062014255563,1.22885226604995,4.74790635828698,6.77008562657831,4.16730696445408,1.11673199600552,2.8138130501584,0.30559649555362,0.883885756421003,1.70846016958924,3.35519002485541,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0.517875767294343,0.148442139064825,0.520455980298408,2.13125834818499,0.691846491768175,1.65794904607885,1.29347577849275,0,0.247194967734374,0,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.898743836428936,2.74500361691176,6.65968066198181,3.30266208365325,3.83573185995496,0.83115217823824,2.75810147215188,1.32391173005411,0.248813941220186,0.252722758433675,0.420883711772948,4.16385417480652,1.60931473103431,3.06105620669094,3.76762044589288,5.78310242786287,3.45907044769094,3.09215691047105,2.84573707812917,3.44908788692548,4.16033376369202,3.16712023495108,1.7535658594206,1.11218899690239,0.696504333044333,0.823128545631774,1.99034266818493,0,0.51469581422943,0,1.44988040774851,0.938104239924385,1.08037236876609,1.42046841351126,1.57411385397923,0.925602677324269,0.697601834251224,0.804820204198858,0.700592054203017,0.658239399653922,0.656669856316381,0.0810688095458557,0.146199987425332,0.439100230582101,0,3.15434922846191,3.91037527041281,0,0,3.83918850963421,3.0190767341857,1.9330119198314,1.4117846723634,0.889512175379481,0.380451252225118,0,0.494096864172033,0,0.397912944082302,0,0,0.432276099749388,0,2.46568271239006,1.71372768914593,0,1.22190796707189,1.35766741017338,1.05203729835478,1.07502113111237,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0.224862112384854,0,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,2.27389694124582,2.11854469374634,3.05541154395339,1.87752198630802,0.502518772325447,0.714130922658041,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.80275294993896,0.703270119553219,0.983609672260053,0,1.89304931649754,1.17131623288992,3.23135096599198,1.67278158566786,2.45078541490634,2.26461224631066,0.809621403349789,2.63030272120181,1.18586333383957,2.24924921495265,1.13552068166615,1.24645922567079,2.28041743095006,1.81467135269789,0,0.971122544619926,2.11626489875326,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,3.6012218806262,5.6917820864412,3.85806663056866,6.0295679438373,2.31879462882692,3.45552943264454,6.39376393140658,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.422190474497091,0.358117032009409,0,0,0.927126510052548,0,0.82554747185289,0.740778109478847,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.829199842826543,0,3.32152793260192,1.21991680276109,1.18805874903981,1.04544148007234,0.218362563746178,0.944050424693745,0.165306911450672,0.523511883968059,0.129614973291793,0,5.6369293868419,0.897099276263873,1.82004339502807,0.777804753376191,1.29159823477731,1.35164900392623,1.29092962510329,1.3020438484395,0.524296722128554,0.724752362478018,2.30424005006292,0.632022241256357,1.41907650703115,1.43795340030758,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.288635524920988,0.467507608726276,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,5.0827665835536,5.06357760157895,2.86447756719698,5.15559547031063,0.685082519770642,7.55393897389701,2.02506750069542,1.80128481289688,3.17199686288943,2.07104124700728,3.32119512269365,2.79317411380722,4.26834014385335,2.18796045361465,1.25767897576789,1.2869045591501,1.33348036680969,1.23621034343337,2.24643446714271,0.505394423527595,0.50695859978048,1.50901073108861,1.31098110457835,1.34452820050225,1.89537047553524,1.42888107384922,1.27472758539341,1.54327376370964,0.824171801606613,0.588795680537589,1.02860775715625,0.887379030796687,1.90748951957857,0.726732083161643,0.752875043322645,0.761531471025089,1.28049581010941,1.31534855718921,1.62964936615034,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.77468420592983,0.578719832943424,2.49810577937946,0.701794825336225,1.50409737833809,1.53030665655075,0.661774257358546,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0.782391344348039,1.96222640742402,0.878744730937887,0.777719596297134,1.1198913730029,2.87505128729943,0,0,0,0,0,0.515672092277442,7.48570905180512,3.1739458756322,3.1691570175309,1.0165335962074,0,0,0,0,0,1.53687322128622,4.14758449233911,3.78016627328734,5.46844899513593,0.285650984403804,1.76694832761291,4.16468717330844,6.13411014516713,2.75765635983006,1.10115880999389,0.383062014255563,1.22885226604995,4.74790635828698,6.77008562657831,4.16730696445408,1.11673199600552,2.8138130501584,0.30559649555362,0.883885756421003,1.70846016958924,3.35519002485541,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0.517875767294343,0.148442139064825,0.520455980298408,2.13125834818499,0.691846491768175,1.65794904607885,1.29347577849275,0,0.247194967734374,0,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.898743836428936,2.74500361691176,6.65968066198181,3.30266208365325,3.83573185995496,0.83115217823824,2.75810147215188,1.32391173005411,0.248813941220186,0.252722758433675,0.420883711772948,4.16385417480652,1.60931473103431,3.06105620669094,3.76762044589288,5.78310242786287,3.45907044769094,3.09215691047105,2.84573707812917,3.44908788692548,4.16033376369202,3.16712023495108,1.7535658594206,1.11218899690239,0.696504333044333,0.823128545631774,1.99034266818493,0,0.51469581422943,0,1.44988040774851,0.938104239924385,1.08037236876609,1.42046841351126,1.57411385397923,0.925602677324269,0.697601834251224,0.804820204198858,0.700592054203017,0.658239399653922,0.656669856316381,0.0810688095458557,0.146199987425332,0.439100230582101,0,3.15434922846191,3.91037527041281,0,0,3.83918850963421,3.0190767341857,1.9330119198314,1.4117846723634,0.889512175379481,0.380451252225118,0,0.494096864172033,0,0.397912944082302,0,0,0.432276099749388,0,2.46568271239006,1.71372768914593,0,1.22190796707189,1.35766741017338,1.05203729835478,1.07502113111237,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0.224862112384854,0,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,2.27389694124582,2.11854469374634,3.05541154395339,1.87752198630802,0.502518772325447,0.714130922658041,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.80275294993896,0.703270119553219,0.983609672260053,0,1.89304931649754,1.17131623288992,3.23135096599198,1.67278158566786,2.45078541490634,2.26461224631066,0.809621403349789,2.63030272120181,1.18586333383957,2.24924921495265,1.13552068166615,1.24645922567079,2.28041743095006,1.81467135269789,0,0.971122544619926,2.11626489875326,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,3.6012218806262,5.6917820864412,3.85806663056866,6.0295679438373,2.31879462882692,3.45552943264454,6.39376393140658,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.422190474497091,0.358117032009409,0,0,0.927126510052548,0,0.82554747185289,0.740778109478847,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.829199842826543,0,3.32152793260192,1.21991680276109,1.18805874903981,1.04544148007234,0.218362563746178,0.944050424693745,0.165306911450672,0.523511883968059,0.129614973291793,0,5.6369293868419,0.897099276263873,1.82004339502807,0.777804753376191,1.29159823477731,1.35164900392623,1.29092962510329,1.3020438484395,0.524296722128554,0.724752362478018,2.30424005006292,0.632022241256357,1.41907650703115,1.43795340030758,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.288635524920988,0.467507608726276,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,5.0827665835536,5.06357760157895,2.86447756719698,5.15559547031063,0.685082519770642,7.55393897389701,2.02506750069542,1.80128481289688,3.17199686288943,2.07104124700728,3.32119512269365,2.79317411380722,4.26834014385335,2.18796045361465,1.25767897576789,1.2869045591501,1.33348036680969,1.23621034343337,2.24643446714271,0.505394423527595,0.50695859978048,1.50901073108861,1.31098110457835,1.34452820050225,1.89537047553524,1.42888107384922,1.27472758539341,1.54327376370964,0.824171801606613,0.588795680537589,1.02860775715625,0.887379030796687,1.90748951957857,0.726732083161643,0.752875043322645,0.761531471025089,1.28049581010941,1.3153485571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|short_description=p3@Phc1
}}
}}

Latest revision as of 14:30, 26 September 2015

Short description:p3@Phc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Phc1_5end
Coexpression cluster:MCL_coexpression_mm9:335
Association with transcript: 0bp_to_ENSMUST00000159384, uc009dpb.1_5end
EntrezGene:Phc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Phc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.66
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.69
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.20e-1133
neuronal stem cell2.20e-1133
neuroblast2.20e-1133
electrically signaling cell2.20e-1133
ectodermal cell1.41e-0944
neurectodermal cell1.41e-0944
neural cell2.10e-0943
CNS neuron (sensu Vertebrata)9.39e-0923
neuroblast (sensu Vertebrata)9.39e-0923
electrically responsive cell3.81e-0839
electrically active cell3.81e-0839

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate2.16e-2349
central nervous system6.28e-2173
neurectoderm1.08e-2064
neural plate1.08e-2064
presumptive neural plate1.08e-2064
nervous system8.67e-2075
regional part of forebrain1.20e-1939
forebrain1.20e-1939
future forebrain1.20e-1939
ectoderm-derived structure1.56e-1995
ectoderm1.56e-1995
presumptive ectoderm1.56e-1995
anterior neural tube8.81e-1940
ecto-epithelium2.50e-1773
brain5.53e-1647
future brain5.53e-1647
regional part of brain1.68e-1546
regional part of nervous system2.79e-1554
neural tube5.11e-1552
neural rod5.11e-1552
future spinal cord5.11e-1552
neural keel5.11e-1552
structure with developmental contribution from neural crest3.57e-1492
brain grey matter4.51e-1429
regional part of telencephalon4.51e-1429
telencephalon4.51e-1429
gray matter7.92e-1434
cerebral cortex1.50e-1021
cerebral hemisphere1.50e-1021
pallium1.50e-1021
regional part of cerebral cortex9.85e-0817
pituitary gland3.47e-078
gland of diencephalon3.47e-078
neuroendocrine gland3.47e-078
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