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FFCP PHASE1:Mm9::chr12:45429951..45429996,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:45429951..45429996,+
|DHSsupport=NA
|short_description=p2@Nrcam
|DPIdataset=NA
|description=CAGE_peak_2_at_Nrcam_5end
|association_with_transcript=0bp_to_ENSMUST00000110750_5end
|EntrezGene=319504
|EntrezGene=319504
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F8WH39
|UniProt=F8WH39
|association_with_transcript=0bp_to_ENSMUST00000110750_5end
|cluster_id=chr12:45429951..45429996,+
|description=CAGE_peak_2_at_Nrcam_5end
|id=chr12:45429951..45429996,+
|ontology_enrichment_celltype=CL:0000221!4.21e-18!44;CL:0000133!4.21e-18!44;CL:0002319!1.47e-17!43;CL:0000540!7.96e-16!33;CL:0000047!7.96e-16!33;CL:0000031!7.96e-16!33;CL:0000404!7.96e-16!33;CL:0000055!8.08e-13!50;CL:0000117!6.73e-12!23;CL:0000337!6.73e-12!23;CL:0000393!1.40e-11!39;CL:0000211!1.40e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.52e-19,44;CL:0000133,1.52e-19,44;CL:0002319,6.09e-19,43;CL:0000540,1.63e-17,33;CL:0000047,1.63e-17,33;CL:0000031,1.63e-17,33;CL:0000404,1.63e-17,33;CL:0000117,4.02e-13,23;CL:0000337,4.02e-13,23;CL:0000393,6.11e-13,39;CL:0000211,6.11e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.02e-37!102;UBERON:0000924!1.02e-37!102;UBERON:0006601!1.02e-37!102;UBERON:0000073!2.26e-37!75;UBERON:0001016!2.26e-37!75;UBERON:0001017!1.29e-35!73;UBERON:0005743!1.29e-35!73;UBERON:0002346!4.89e-30!71;UBERON:0003075!4.89e-30!71;UBERON:0007284!4.89e-30!71;UBERON:0000033!1.12e-27!63;UBERON:0001049!8.11e-26!52;UBERON:0005068!8.11e-26!52;UBERON:0006241!8.11e-26!52;UBERON:0007135!8.11e-26!52;UBERON:0000955!4.57e-25!50;UBERON:0006238!4.57e-25!50;UBERON:0002616!2.30e-24!49;UBERON:0003056!1.38e-23!49;UBERON:0003080!2.57e-20!40;UBERON:0002780!1.13e-19!39;UBERON:0001890!1.13e-19!39;UBERON:0006240!1.13e-19!39;UBERON:0002020!1.43e-18!34;UBERON:0002791!6.00e-16!29;UBERON:0003528!6.00e-16!29;UBERON:0001893!6.00e-16!29;UBERON:0007811!3.05e-14!86;UBERON:0000153!6.12e-13!94;UBERON:0000956!8.60e-12!21;UBERON:0001869!8.60e-12!21;UBERON:0000203!8.60e-12!21;UBERON:0002619!3.71e-10!17;UBERON:0002021!3.45e-08!10;UBERON:0000411!3.45e-08!10;UBERON:0001950!3.45e-08!10;UBERON:0000468!1.92e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.01e-41,75;UBERON:0004121,6.72e-41,95;UBERON:0000924,6.72e-41,95;UBERON:0006601,6.72e-41,95;UBERON:0001017,4.54e-39,73;UBERON:0002346,2.88e-33,64;UBERON:0003075,2.88e-33,64;UBERON:0007284,2.88e-33,64;UBERON:0010371,9.23e-32,73;UBERON:0000073,1.03e-29,54;UBERON:0001049,4.08e-28,52;UBERON:0005068,4.08e-28,52;UBERON:0006241,4.08e-28,52;UBERON:0007135,4.08e-28,52;UBERON:0003056,3.36e-26,49;UBERON:0000955,5.52e-25,47;UBERON:0006238,5.52e-25,47;UBERON:0002616,3.22e-24,46;UBERON:0003080,1.53e-22,40;UBERON:0002780,8.00e-22,39;UBERON:0001890,8.00e-22,39;UBERON:0006240,8.00e-22,39;UBERON:0002020,1.38e-20,34;UBERON:0010314,4.06e-20,92;UBERON:0003528,1.19e-17,29;UBERON:0002791,1.19e-17,29;UBERON:0001893,1.19e-17,29;UBERON:0000956,5.29e-13,21;UBERON:0001869,5.29e-13,21;UBERON:0000203,5.29e-13,21;UBERON:0002619,3.56e-11,17;UBERON:0002021,5.64e-09,10;UBERON:0000411,5.64e-09,10;UBERON:0001950,5.64e-09,10;UBERON:0000025,3.84e-07,114
|phase1_expression=25.623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,6.5407546914134,6.37089929929968,11.8602238435313,5.31948402176378,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,0,32.9775831201144,28.5655128806898,26.6209189472595,0.338844532069132,3.55717918444456,1.7997994345628,4.94433181283487,4.2628806896766,7.19040265244171,10.373894243682,20.3231640124616,17.010748229793,19.3498964443271,27.1368435183613,28.4920417827581,22.2933254571216,15.814502718009,11.0306254393203,72.6764814595965,82.2306457268609,70.5053987646157,34.9498662485014,36.412082153759,41.152156273984,48.5778418262403,57.4017862232314,60.6609043673936,57.1579455818915,53.95886702286,38.9574841774878,130.09760014641,160.967423027453,0,0,0,0.539703191637817,0,0,3.08977724289854,0,0,0,39.1544706979172,0,0,0,0,0,0,2.2836775943812,0.517875767294343,4.15637989381509,6.59244241711316,3.04465478312141,2.7673859670727,4.82312449768392,3.99801604261396,0.753999547978053,0.494389935468748,0.433798070759735,0,1.94120219936891,0.883366073841574,1.93950101254089,0,42.7459963636859,48.5916359807216,0,0,0,0,64.7095562228834,55.3575729410538,20.9842768028484,101.339578672097,91.290418266928,64.8298699025827,56.7844420737152,1.01839363850316,0.995255764880744,0,6.94458124425364,5.07469727554544,17.012755728077,23.4080768746954,23.2085419467001,36.3995270459604,31.1316340292185,27.0797983977616,17.8505325809921,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0,0,92.3172874196519,29.4307191404753,0.330418782983798,0.264450566663544,1.2797295032114,1.62565670302307,1.03093969057675,0.80673409849337,1.11189021922435,0.570676878337677,0,0.988193728344065,0.754005626400808,0,0.779856348476481,0,0,0.597423819763102,1.51734320762465,3.31320686568214,0,3.66572390121566,3.49114476901726,1.61312385747733,2.21327879934901,1.03327103585722,1.41298855057237,0.740382983530803,0,0,0.393117990226406,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,2.60498663367952,0,0.252578877947112,0,0,2.58654466233247,2.65287976478679,4.88894929326078,5.60158783058121,8.68353918667458,12.8979818230198,8.09348379012447,5.65887578787617,23.8029067600348,25.0255099303116,26.7884011344578,4.09658286789345,9.84304396635605,3.61622646453779,12.0633027151418,1.63171705145613,0,0.551873492609465,64.3807865851046,53.6829524592291,0,0.252470927204373,8.51872192423893,12.1036010731958,19.6035291936847,26.5255365727333,36.3161838754302,43.5937857414802,17.8116708736954,30.9791209385991,25.693705566524,83.222220953248,2.12910127812403,0.534196811001766,0.488660878060728,0.659880491890142,0,0.971122544619926,0.604647113929502,0,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,13.2771446243977,23.227881130039,14.746889951234,17.361299837559,16.847322196016,13.7343989553594,12.9993726275676,10.3518082698964,2.3467170806371,2.33015277950202,1.98475558249466,3.79238381765404,1.29171541356724,1.62844897306021,2.14870219205646,2.1338316966858,0,62.6737520795523,0.170870880797853,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0,2.53068794864908,2.43983360552218,1.18805874903981,0.627264888043406,0.655087691238533,0.944050424693745,0.743881101528023,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.2604087696879,3.46035836604846,1.69108884578204,1.44015003128933,0,0.810900861160657,0.924398614483445,1.16928740680016,0.179026695667481,0.39736270956253,0.600977247599844,0.443068581523732,0.302899349844443,0.457240839929999,0.302478555410522,0.487289403698762,0.673482891482306,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.579568782096571,0.750729901804728,0.915758121336325,0,0,113.51512036603,108.176430579187,114.579102687879,123.562438105111,103.447460485367,98.9566005580508,97.20324003338,95.4680950835347,119.62959597183,109.765186091386,3.00983307994112,15.1629451892392,8.53668028770671,7.77941494618541,6.91723436672342,5.51530525350042,8.44537565646138,5.76898160268904,8.98573786857083,5.55933865880354,6.84394109703647,10.7517014590063,7.39767909012071,8.45132011744274,8.2132720606527,7.62069906052918,8.45955579397445,5.78727661391115,10.714233420886,6.77115032618228,6.51451579532289,9.05126611412621,11.4449371174714,8.28474574804273,10.257922465271,7.36147088657586,6.0366231048015,8.41823076601097,8.14824683075171,7.2948495315506,5.45721083371201,6.10727790728493,4.09231043169689,8.36658942404216,7.71626443924566,11.9909077410214,3.74290573512653,6.87587372954555,3.63447830930802,2.42650561031467,4.40548887678801
|phase1_expression=25.623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,6.5407546914134,6.37089929929968,11.8602238435313,5.31948402176378,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,0,32.9775831201144,28.5655128806898,26.6209189472595,0.338844532069132,3.55717918444456,1.7997994345628,4.94433181283487,4.2628806896766,7.19040265244171,10.373894243682,20.3231640124616,17.010748229793,19.3498964443271,27.1368435183613,28.4920417827581,22.2933254571216,15.814502718009,11.0306254393203,72.6764814595965,82.2306457268609,70.5053987646157,34.9498662485014,36.412082153759,41.152156273984,48.5778418262403,57.4017862232314,60.6609043673936,57.1579455818915,53.95886702286,38.9574841774878,130.09760014641,160.967423027453,0,0,0,0.539703191637817,0,0,3.08977724289854,0,0,0,39.1544706979172,0,0,0,0,0,0,2.2836775943812,0.517875767294343,4.15637989381509,6.59244241711316,3.04465478312141,2.7673859670727,4.82312449768392,3.99801604261396,0.753999547978053,0.494389935468748,0.433798070759735,0,1.94120219936891,0.883366073841574,1.93950101254089,0,42.7459963636859,48.5916359807216,0,0,0,0,64.7095562228834,55.3575729410538,20.9842768028484,101.339578672097,91.290418266928,64.8298699025827,56.7844420737152,1.01839363850316,0.995255764880744,0,6.94458124425364,5.07469727554544,17.012755728077,23.4080768746954,23.2085419467001,36.3995270459604,31.1316340292185,27.0797983977616,17.8505325809921,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0,0,92.3172874196519,29.4307191404753,0.330418782983798,0.264450566663544,1.2797295032114,1.62565670302307,1.03093969057675,0.80673409849337,1.11189021922435,0.570676878337677,0,0.988193728344065,0.754005626400808,0,0.779856348476481,0,0,0.597423819763102,1.51734320762465,3.31320686568214,0,3.66572390121566,3.49114476901726,1.61312385747733,2.21327879934901,1.03327103585722,1.41298855057237,0.740382983530803,0,0,0.393117990226406,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,2.60498663367952,0,0.252578877947112,0,0,2.58654466233247,2.65287976478679,4.88894929326078,5.60158783058121,8.68353918667458,12.8979818230198,8.09348379012447,5.65887578787617,23.8029067600348,25.0255099303116,26.7884011344578,4.09658286789345,9.84304396635605,3.61622646453779,12.0633027151418,1.63171705145613,0,0.551873492609465,64.3807865851046,53.6829524592291,0,0.252470927204373,8.51872192423893,12.1036010731958,19.6035291936847,26.5255365727333,36.3161838754302,43.5937857414802,17.8116708736954,30.9791209385991,25.693705566524,83.222220953248,2.12910127812403,0.534196811001766,0.488660878060728,0.659880491890142,0,0.971122544619926,0.604647113929502,0,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,13.2771446243977,23.227881130039,14.746889951234,17.361299837559,16.847322196016,13.7343989553594,12.9993726275676,10.3518082698964,2.3467170806371,2.33015277950202,1.98475558249466,3.79238381765404,1.29171541356724,1.62844897306021,2.14870219205646,2.1338316966858,0,62.6737520795523,0.170870880797853,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0,2.53068794864908,2.43983360552218,1.18805874903981,0.627264888043406,0.655087691238533,0.944050424693745,0.743881101528023,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.2604087696879,3.46035836604846,1.69108884578204,1.44015003128933,0,0.810900861160657,0.924398614483445,1.16928740680016,0.179026695667481,0.39736270956253,0.600977247599844,0.443068581523732,0.302899349844443,0.457240839929999,0.302478555410522,0.487289403698762,0.673482891482306,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.579568782096571,0.750729901804728,0.915758121336325,0,0,113.51512036603,108.176430579187,114.579102687879,123.562438105111,103.447460485367,98.9566005580508,97.20324003338,95.4680950835347,119.62959597183,109.765186091386,3.00983307994112,15.1629451892392,8.53668028770671,7.77941494618541,6.91723436672342,5.51530525350042,8.44537565646138,5.76898160268904,8.98573786857083,5.55933865880354,6.84394109703647,10.7517014590063,7.39767909012071,8.45132011744274,8.2132720606527,7.62069906052918,8.45955579397445,5.78727661391115,10.714233420886,6.77115032618228,6.51451579532289,9.05126611412621,11.4449371174714,8.28474574804273,10.257922465271,7.36147088657586,6.0366231048015,8.41823076601097,8.14824683075171,7.2948495315506,5.45721083371201,6.10727790728493,4.09231043169689,8.36658942404216,7.71626443924566,11.9909077410214,3.74290573512653,6.87587372954555,3.63447830930802,2.4265056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|short_description=p2@Nrcam
}}
}}

Latest revision as of 15:09, 26 September 2015

Short description:p2@Nrcam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrcam_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000110750_5end
EntrezGene:Nrcam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrcam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C332.98
Mouse Granule cells, donor2.CNhs12357.11731-123E328.57
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D372.68
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.23
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D770.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E557.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I660.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D657.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.96
Mouse Schwann, donor1.CNhs12507.11728-123D9130.10
Mouse Schwann, donor2.CNhs12573.11746-123F9160.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B242.75
cerebellum, neonate N30.CNhs11135.1395-42I248.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A464.71
corpus striatum, adult.CNhs10487.19-21D855.36
corpus striatum, neonate N00.CNhs11226.630-43F120.98
cortex, adult.CNhs10473.12-14D5101.34
cortex, neonate N30.CNhs11107.1392-42F291.29
diencephalon, adult.CNhs10482.20-12F264.83
diencephalon, neonate N30.CNhs11201.1388-42B256.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C923.41
eyeball, embryo E17.CNhs11023.1261-18D423.21
eyeball, neonate N00.CNhs11207.633-15C636.40
eyeball, neonate N01.CNhs11140.1532-43E731.13
eyeball, neonate N02.CNhs11205.1551-44G827.08
eyeball, neonate N16.CNhs11188.777-19A217.85
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E892.32
hippocampus, neonate N00.CNhs11228.627-43G129.43
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A612.90
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E523.80
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E626.79
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C264.38
medulla oblongata, neonate N30.CNhs11200.1396-42A353.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.32
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D943.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.69
olfactory brain, adult.CNhs10489.18-22I983.22
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E623.23
pituitary gland, embryo E13.CNhs11009.370-44C714.75
pituitary gland, embryo E14.CNhs11037.398-44A517.36
pituitary gland, embryo E15.CNhs10592.427-16B916.85
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F513.00
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C962.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1113.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2108.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3114.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7123.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4103.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A598.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A697.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8119.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9109.77
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.52e-1944
neurectodermal cell1.52e-1944
neural cell6.09e-1943
neuron1.63e-1733
neuronal stem cell1.63e-1733
neuroblast1.63e-1733
electrically signaling cell1.63e-1733
CNS neuron (sensu Vertebrata)4.02e-1323
neuroblast (sensu Vertebrata)4.02e-1323
electrically responsive cell6.11e-1339
electrically active cell6.11e-1339

Uber anatomy
Ontology termp-valuen
nervous system5.01e-4175
ectoderm-derived structure6.72e-4195
ectoderm6.72e-4195
presumptive ectoderm6.72e-4195
central nervous system4.54e-3973
neurectoderm2.88e-3364
neural plate2.88e-3364
presumptive neural plate2.88e-3364
ecto-epithelium9.23e-3273
regional part of nervous system1.03e-2954
neural tube4.08e-2852
neural rod4.08e-2852
future spinal cord4.08e-2852
neural keel4.08e-2852
pre-chordal neural plate3.36e-2649
brain5.52e-2547
future brain5.52e-2547
regional part of brain3.22e-2446
anterior neural tube1.53e-2240
regional part of forebrain8.00e-2239
forebrain8.00e-2239
future forebrain8.00e-2239
gray matter1.38e-2034
structure with developmental contribution from neural crest4.06e-2092
brain grey matter1.19e-1729
regional part of telencephalon1.19e-1729
telencephalon1.19e-1729
cerebral cortex5.29e-1321
cerebral hemisphere5.29e-1321
pallium5.29e-1321
regional part of cerebral cortex3.56e-1117
occipital lobe5.64e-0910
visual cortex5.64e-0910
neocortex5.64e-0910
tube3.84e-07114
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