FFCP PHASE1:Mm9::chr9:40812682..40812715,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54698 | |EntrezGene=54698 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=279 | |MCL_coexpression_id=279 | ||
|TSSclassifier=NA | |||
|UniProt=E9QPS7,Q149L7 | |UniProt=E9QPS7,Q149L7 | ||
|association_with_transcript=-13bp_to_ENSMUST00000034519,NM_019465,uc009paf.1_5end | |association_with_transcript=-13bp_to_ENSMUST00000034519,NM_019465,uc009paf.1_5end | ||
|cluster_id=chr9:40812682..40812715,- | |||
|description=CAGE_peak_1_at_Crtam_5end | |description=CAGE_peak_1_at_Crtam_5end | ||
|id=chr9:40812682..40812715,- | |id=chr9:40812682..40812715,- | ||
|ontology_enrichment_celltype=CL:0000791!1.38e-11!9;CL:0000789!1.38e-11!9;CL:0002420!1.38e-11!9;CL:0002419!1.38e-11!9;CL:0000790!1.38e-11!9;CL:0000893!7.80e-11!6;CL:0002489!7.80e-11!6;CL:0000898!7.80e-11!6;CL:0000809!7.80e-11!6;CL:0000810!7.80e-11!6;CL:0000895!7.80e-11!6;CL:0000808!7.80e-11!6;CL:0000894!7.80e-11!6;CL:0000806!7.80e-11!6;CL:0000807!7.80e-11!6;CL:0000805!7.80e-11!6;CL:0002425!7.80e-11!6;CL:0002436!7.80e-11!6;CL:0002427!7.80e-11!6;CL:0002428!7.80e-11!6;CL:0002429!7.80e-11!6;CL:0002433!7.80e-11!6;CL:0002431!7.80e-11!6;CL:0002432!7.80e-11!6;CL:0000624!4.53e-10!8;CL:0000084!4.10e-09!11;CL:0000827!4.10e-09!11;CL:0002031!1.47e-08!25;CL:0000838!3.44e-08!12;CL:0000542!2.06e-07!13;CL:0000051!2.06e-07!13;CL:0000553!9.97e-07!6;CL:0000556!9.97e-07!6 | |ontology_enrichment_celltype=CL:0000791!1.38e-11!9;CL:0000789!1.38e-11!9;CL:0002420!1.38e-11!9;CL:0002419!1.38e-11!9;CL:0000790!1.38e-11!9;CL:0000893!7.80e-11!6;CL:0002489!7.80e-11!6;CL:0000898!7.80e-11!6;CL:0000809!7.80e-11!6;CL:0000810!7.80e-11!6;CL:0000895!7.80e-11!6;CL:0000808!7.80e-11!6;CL:0000894!7.80e-11!6;CL:0000806!7.80e-11!6;CL:0000807!7.80e-11!6;CL:0000805!7.80e-11!6;CL:0002425!7.80e-11!6;CL:0002436!7.80e-11!6;CL:0002427!7.80e-11!6;CL:0002428!7.80e-11!6;CL:0002429!7.80e-11!6;CL:0002433!7.80e-11!6;CL:0002431!7.80e-11!6;CL:0002432!7.80e-11!6;CL:0000624!4.53e-10!8;CL:0000084!4.10e-09!11;CL:0000827!4.10e-09!11;CL:0002031!1.47e-08!25;CL:0000838!3.44e-08!12;CL:0000542!2.06e-07!13;CL:0000051!2.06e-07!13;CL:0000553!9.97e-07!6;CL:0000556!9.97e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.16e-36,6;CL:0002489,2.16e-36,6;CL:0000898,2.16e-36,6;CL:0000809,2.16e-36,6;CL:0000810,2.16e-36,6;CL:0000895,2.16e-36,6;CL:0000808,2.16e-36,6;CL:0000894,2.16e-36,6;CL:0000806,2.16e-36,6;CL:0000807,2.16e-36,6;CL:0000805,2.16e-36,6;CL:0002425,2.16e-36,6;CL:0002436,2.16e-36,6;CL:0002427,2.16e-36,6;CL:0002428,2.16e-36,6;CL:0002429,2.16e-36,6;CL:0002433,2.16e-36,6;CL:0002431,2.16e-36,6;CL:0002432,2.16e-36,6;CL:0000791,9.05e-33,9;CL:0000789,9.05e-33,9;CL:0002420,9.05e-33,9;CL:0002419,9.05e-33,9;CL:0000790,9.05e-33,9;CL:0000624,3.01e-27,8;CL:0000084,9.93e-27,11;CL:0000827,9.93e-27,11;CL:0000838,1.84e-24,12;CL:0000542,1.53e-22,13;CL:0000051,1.53e-22,13;CL:0002031,1.23e-18,25;CL:0000738,4.10e-17,17;CL:0002087,4.10e-17,17;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0002320,1.16e-09,46;CL:0000134,1.16e-09,46;CL:0000219,4.53e-08,54;CL:0000625,1.83e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.30e-23!48;UBERON:0004177!3.52e-23!29;UBERON:0002390!1.66e-20!45;UBERON:0003061!1.66e-20!45;UBERON:0003408!4.06e-19!24;UBERON:0002370!7.09e-18!23;UBERON:0000974!7.09e-18!23;UBERON:0004807!7.09e-18!23;UBERON:0005058!7.09e-18!23;UBERON:0003351!7.09e-18!23;UBERON:0009113!7.09e-18!23;UBERON:0003295!7.09e-18!23;UBERON:0009722!7.09e-18!23;UBERON:0005562!7.09e-18!23;UBERON:0007690!7.09e-18!23;UBERON:0006562!6.65e-17!24;UBERON:0001557!6.65e-17!24;UBERON:0001042!6.65e-17!24;UBERON:0008814!6.65e-17!24;UBERON:0009145!6.65e-17!24;UBERON:0001004!1.08e-14!42;UBERON:0000072!1.99e-14!27;UBERON:0000065!1.10e-13!41;UBERON:0003081!2.56e-13!88;UBERON:0002405!2.75e-13!70;UBERON:0000063!3.56e-11!35;UBERON:0005057!3.21e-10!51;UBERON:0001041!7.11e-08!92;UBERON:0004119!7.51e-08!130;UBERON:0000925!7.51e-08!130;UBERON:0006595!7.51e-08!130;UBERON:0000077!1.05e-07!97;UBERON:0001007!1.64e-07!128;UBERON:0001555!1.64e-07!128;UBERON:0007026!1.64e-07!128;UBERON:0000064!6.21e-07!99 | |ontology_enrichment_uberon=UBERON:0002193!1.30e-23!48;UBERON:0004177!3.52e-23!29;UBERON:0002390!1.66e-20!45;UBERON:0003061!1.66e-20!45;UBERON:0003408!4.06e-19!24;UBERON:0002370!7.09e-18!23;UBERON:0000974!7.09e-18!23;UBERON:0004807!7.09e-18!23;UBERON:0005058!7.09e-18!23;UBERON:0003351!7.09e-18!23;UBERON:0009113!7.09e-18!23;UBERON:0003295!7.09e-18!23;UBERON:0009722!7.09e-18!23;UBERON:0005562!7.09e-18!23;UBERON:0007690!7.09e-18!23;UBERON:0006562!6.65e-17!24;UBERON:0001557!6.65e-17!24;UBERON:0001042!6.65e-17!24;UBERON:0008814!6.65e-17!24;UBERON:0009145!6.65e-17!24;UBERON:0001004!1.08e-14!42;UBERON:0000072!1.99e-14!27;UBERON:0000065!1.10e-13!41;UBERON:0003081!2.56e-13!88;UBERON:0002405!2.75e-13!70;UBERON:0000063!3.56e-11!35;UBERON:0005057!3.21e-10!51;UBERON:0001041!7.11e-08!92;UBERON:0004119!7.51e-08!130;UBERON:0000925!7.51e-08!130;UBERON:0006595!7.51e-08!130;UBERON:0000077!1.05e-07!97;UBERON:0001007!1.64e-07!128;UBERON:0001555!1.64e-07!128;UBERON:0007026!1.64e-07!128;UBERON:0000064!6.21e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.69e-14,48;UBERON:0002405,9.69e-14,48;UBERON:0004177,1.86e-12,29;UBERON:0005057,1.86e-12,29;UBERON:0002390,4.38e-12,45;UBERON:0003061,4.38e-12,45;UBERON:0000077,3.53e-10,35;UBERON:0002384,1.16e-09,46;UBERON:0002370,2.89e-09,23;UBERON:0000974,2.89e-09,23;UBERON:0004807,2.89e-09,23;UBERON:0005058,2.89e-09,23;UBERON:0003351,2.89e-09,23;UBERON:0009113,2.89e-09,23;UBERON:0003295,2.89e-09,23;UBERON:0009722,2.89e-09,23;UBERON:0005562,2.89e-09,23;UBERON:0007690,2.89e-09,23;UBERON:0006562,7.31e-09,24;UBERON:0003408,7.31e-09,24;UBERON:0001557,7.31e-09,24;UBERON:0001042,7.31e-09,24;UBERON:0008814,7.31e-09,24;UBERON:0009145,7.31e-09,24;UBERON:0000072,7.84e-08,27;UBERON:0000029,2.43e-07,1;UBERON:0001097,2.43e-07,1;UBERON:0003968,2.43e-07,1;UBERON:0001467,2.43e-07,1;UBERON:0003081,6.98e-07,87;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,4.646027831005,30.1943238955372,17.977886663678,31.4302306441625,3.76641605848653,8.13009742496676,0.666219523631325,0.809901069559304,0,1.57731082679119,1.23402990245165,0.42438965179803,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07453257684653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,7.76813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0,1.02522528478712,0,0.370389054739423,0.753473828018764,0.546776910884101,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0,0.39736270956253,0.360586348559907,0.443068581523732,0.605798699688886,0.304827226619999,0.604957110821043,0.38983152295901,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.549454872801795,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,4.646027831005,30.1943238955372,17.977886663678,31.4302306441625,3.76641605848653,8.13009742496676,0.666219523631325,0.809901069559304,0,1.57731082679119,1.23402990245165,0.42438965179803,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07453257684653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,7.76813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0,1.02522528478712,0,0.370389054739423,0.753473828018764,0.546776910884101,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0,0.39736270956253,0.360586348559907,0.443068581523732,0.605798699688886,0.304827226619999,0.604957110821043,0.38983152295901,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.549454872801795,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Crtam | |short_description=p1@Crtam | ||
}} | }} |
Latest revision as of 15:33, 26 September 2015
Short description: | p1@Crtam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Crtam_5end |
Coexpression cluster: | MCL_coexpression_mm9:279 |
Association with transcript: | -13bp_to_ENSMUST00000034519, NM_019465, uc009paf.1_5end |
EntrezGene: | Crtam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.69e-14 | 48 |
immune system | 9.69e-14 | 48 |
hemopoietic organ | 1.86e-12 | 29 |
immune organ | 1.86e-12 | 29 |
hematopoietic system | 4.38e-12 | 45 |
blood island | 4.38e-12 | 45 |
mixed endoderm/mesoderm-derived structure | 3.53e-10 | 35 |
connective tissue | 1.16e-09 | 46 |
thymus | 2.89e-09 | 23 |
neck | 2.89e-09 | 23 |
respiratory system epithelium | 2.89e-09 | 23 |
hemolymphoid system gland | 2.89e-09 | 23 |
pharyngeal epithelium | 2.89e-09 | 23 |
thymic region | 2.89e-09 | 23 |
pharyngeal gland | 2.89e-09 | 23 |
entire pharyngeal arch endoderm | 2.89e-09 | 23 |
thymus primordium | 2.89e-09 | 23 |
early pharyngeal endoderm | 2.89e-09 | 23 |
pharynx | 7.31e-09 | 24 |
gland of gut | 7.31e-09 | 24 |
upper respiratory tract | 7.31e-09 | 24 |
chordate pharynx | 7.31e-09 | 24 |
pharyngeal arch system | 7.31e-09 | 24 |
pharyngeal region of foregut | 7.31e-09 | 24 |
segment of respiratory tract | 7.84e-08 | 27 |
lymph node | 2.43e-07 | 1 |
axillary lymph node | 2.43e-07 | 1 |
peripheral lymph node | 2.43e-07 | 1 |
shoulder | 2.43e-07 | 1 |
lateral plate mesoderm | 6.98e-07 | 87 |
seminal vesicle | 8.26e-07 | 1 |
vesicular gland | 8.26e-07 | 1 |
seminal fluid secreting gland | 8.26e-07 | 1 |