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FFCP PHASE1:Mm9::chr6:124706980..124706993,-: Difference between revisions

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{{FFCP|EntrezGene=13498|HGNC=|UniProt=O35126|association_with_transcript=-438bp_to_ENSMUST00000088357_5end|description=CAGE_peak_9_at_Atn1_5end|id=chr6:124706980..124706993,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!8.21e-18!50;UBERON:0006238!8.21e-18!50;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0002616!3.72e-17!49;UBERON:0000073!7.18e-17!75;UBERON:0001016!7.18e-17!75;UBERON:0001049!1.36e-16!52;UBERON:0005068!1.36e-16!52;UBERON:0006241!1.36e-16!52;UBERON:0007135!1.36e-16!52;UBERON:0000033!2.70e-15!63;UBERON:0004121!8.10e-15!102;UBERON:0000924!8.10e-15!102;UBERON:0006601!8.10e-15!102;UBERON:0002346!5.88e-14!71;UBERON:0003075!5.88e-14!71;UBERON:0007284!5.88e-14!71;UBERON:0003080!7.35e-14!40;UBERON:0000153!2.61e-13!94;UBERON:0002780!2.99e-13!39;UBERON:0001890!2.99e-13!39;UBERON:0006240!2.99e-13!39;UBERON:0003056!6.90e-13!49;UBERON:0007811!6.63e-11!86;UBERON:0002020!8.41e-11!34;UBERON:0002791!3.23e-10!29;UBERON:0003528!3.23e-10!29;UBERON:0001893!3.23e-10!29;UBERON:0000956!9.42e-09!21;UBERON:0001869!9.42e-09!21;UBERON:0000203!9.42e-09!21;UBERON:0002619!2.99e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.91e-20,54;UBERON:0000955,4.38e-19,47;UBERON:0006238,4.38e-19,47;UBERON:0001049,6.93e-19,52;UBERON:0005068,6.93e-19,52;UBERON:0006241,6.93e-19,52;UBERON:0007135,6.93e-19,52;UBERON:0001017,1.32e-18,73;UBERON:0002616,2.78e-18,46;UBERON:0001016,1.64e-17,75;UBERON:0010371,1.37e-16,73;UBERON:0003080,2.22e-16,40;UBERON:0002346,2.38e-16,64;UBERON:0003075,2.38e-16,64;UBERON:0007284,2.38e-16,64;UBERON:0004121,2.65e-16,95;UBERON:0000924,2.65e-16,95;UBERON:0006601,2.65e-16,95;UBERON:0002780,1.29e-15,39;UBERON:0001890,1.29e-15,39;UBERON:0006240,1.29e-15,39;UBERON:0003056,1.75e-14,49;UBERON:0003528,9.03e-12,29;UBERON:0002791,9.03e-12,29;UBERON:0001893,9.03e-12,29;UBERON:0002020,1.25e-11,34;UBERON:0000956,1.03e-10,21;UBERON:0001869,1.03e-10,21;UBERON:0000203,1.03e-10,21;UBERON:0002619,4.47e-10,17;UBERON:0002021,5.01e-08,10;UBERON:0000411,5.01e-08,10;UBERON:0001950,5.01e-08,10;UBERON:0010314,1.29e-07,92|phase1_expression=0.960893082628764,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.516493293766305,1.267098499365,0.70219357896598,0.856089841127525,0.319088635981346,0.171200729931206,1.66098764596095,0,0,0,0,0.411343300817216,0.42438965179803,0.595303031057488,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,1.1330713617802,1.52065396829272,0.917733760808408,2.34717403304412,1.30815093828268,1.97717564461025,2.13872888981712,0.55994568650145,1.43752564364972,0.503347818173209,1.45072428402269,1.68046899571232,1.28629718017973,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,3.89480143673926,4.61061966385865,1.03689612308478,1.21505344498522,1.05162480675691,1.42825492201902,0.662605622854841,1.22490799214954,1.0543001812006,1.83843757322004,3.30347642998166,2.17068474744819,2.61131106535614,0.923204014111357,1.18933936683133,2.6045668527838,2.51264699101243,0.56276261003168,1.83357897332172,1.47314292736834,0.996601765593721,2.05039390407831,0.454357159999104,0.831287161174641,0,0,0,0,0,0,0,1.36344258062446,1.03914401841148,1.06001872353102,0.704217098883403,1.28326477414318,0,7.11066703153331,0.865964164044856,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.693941307064543,0.913396434936424,0.230615497256059,0.753613202763113,1.05829836422134,0.879666139307728,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,0,1.17112318804619,1.67557365450764,0.255457055208591,0.239630249011841,0,0,2.99581278809645,2.28750301409313,1.13088916901578,3.82413504423008,2.55715457330331,2.28566849015516,1.46017136760982,1.83310854930569,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.229902104433473,0.540186389416048,1.9591626318643,1.36072998302656,1.15302348256365,0.937017245597288,1.03481348295606,1.94011193639558,3.02569728268511,2.11141348996739,1.09597866213787,2.78047249225598,2.43776516565517,1.85203922767149,1.59227413454795,0,0,0.852490498186778,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.787056926989615,0.154267112887378,0.232533944750408,1.07309360559848,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,1.47202963994889,1.3377599609307,0,0.264450566663544,0.213288250535234,1.62565670302307,0.902072229254653,1.4117846723634,1.11189021922435,0,0.949058123089023,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,1.51734320762465,1.25673363870702,2.25415471346161,0.203651327845314,0.7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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13498
|HGNC=
|TSSclassifier=NA
|UniProt=O35126
|association_with_transcript=-438bp_to_ENSMUST00000088357_5end
|cluster_id=chr6:124706980..124706993,-
|description=CAGE_peak_9_at_Atn1_5end
|id=chr6:124706980..124706993,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!8.21e-18!50;UBERON:0006238!8.21e-18!50;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0002616!3.72e-17!49;UBERON:0000073!7.18e-17!75;UBERON:0001016!7.18e-17!75;UBERON:0001049!1.36e-16!52;UBERON:0005068!1.36e-16!52;UBERON:0006241!1.36e-16!52;UBERON:0007135!1.36e-16!52;UBERON:0000033!2.70e-15!63;UBERON:0004121!8.10e-15!102;UBERON:0000924!8.10e-15!102;UBERON:0006601!8.10e-15!102;UBERON:0002346!5.88e-14!71;UBERON:0003075!5.88e-14!71;UBERON:0007284!5.88e-14!71;UBERON:0003080!7.35e-14!40;UBERON:0000153!2.61e-13!94;UBERON:0002780!2.99e-13!39;UBERON:0001890!2.99e-13!39;UBERON:0006240!2.99e-13!39;UBERON:0003056!6.90e-13!49;UBERON:0007811!6.63e-11!86;UBERON:0002020!8.41e-11!34;UBERON:0002791!3.23e-10!29;UBERON:0003528!3.23e-10!29;UBERON:0001893!3.23e-10!29;UBERON:0000956!9.42e-09!21;UBERON:0001869!9.42e-09!21;UBERON:0000203!9.42e-09!21;UBERON:0002619!2.99e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.91e-20,54;UBERON:0000955,4.38e-19,47;UBERON:0006238,4.38e-19,47;UBERON:0001049,6.93e-19,52;UBERON:0005068,6.93e-19,52;UBERON:0006241,6.93e-19,52;UBERON:0007135,6.93e-19,52;UBERON:0001017,1.32e-18,73;UBERON:0002616,2.78e-18,46;UBERON:0001016,1.64e-17,75;UBERON:0010371,1.37e-16,73;UBERON:0003080,2.22e-16,40;UBERON:0002346,2.38e-16,64;UBERON:0003075,2.38e-16,64;UBERON:0007284,2.38e-16,64;UBERON:0004121,2.65e-16,95;UBERON:0000924,2.65e-16,95;UBERON:0006601,2.65e-16,95;UBERON:0002780,1.29e-15,39;UBERON:0001890,1.29e-15,39;UBERON:0006240,1.29e-15,39;UBERON:0003056,1.75e-14,49;UBERON:0003528,9.03e-12,29;UBERON:0002791,9.03e-12,29;UBERON:0001893,9.03e-12,29;UBERON:0002020,1.25e-11,34;UBERON:0000956,1.03e-10,21;UBERON:0001869,1.03e-10,21;UBERON:0000203,1.03e-10,21;UBERON:0002619,4.47e-10,17;UBERON:0002021,5.01e-08,10;UBERON:0000411,5.01e-08,10;UBERON:0001950,5.01e-08,10;UBERON:0010314,1.29e-07,92
|phase1_expression=0.960893082628764,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.516493293766305,1.267098499365,0.70219357896598,0.856089841127525,0.319088635981346,0.171200729931206,1.66098764596095,0,0,0,0,0.411343300817216,0.42438965179803,0.595303031057488,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,1.1330713617802,1.52065396829272,0.917733760808408,2.34717403304412,1.30815093828268,1.97717564461025,2.13872888981712,0.55994568650145,1.43752564364972,0.503347818173209,1.45072428402269,1.68046899571232,1.28629718017973,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,3.89480143673926,4.61061966385865,1.03689612308478,1.21505344498522,1.05162480675691,1.42825492201902,0.662605622854841,1.22490799214954,1.0543001812006,1.83843757322004,3.30347642998166,2.17068474744819,2.61131106535614,0.923204014111357,1.18933936683133,2.6045668527838,2.51264699101243,0.56276261003168,1.83357897332172,1.47314292736834,0.996601765593721,2.05039390407831,0.454357159999104,0.831287161174641,0,0,0,0,0,0,0,1.36344258062446,1.03914401841148,1.06001872353102,0.704217098883403,1.28326477414318,0,7.11066703153331,0.865964164044856,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.693941307064543,0.913396434936424,0.230615497256059,0.753613202763113,1.05829836422134,0.879666139307728,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,0,1.17112318804619,1.67557365450764,0.255457055208591,0.239630249011841,0,0,2.99581278809645,2.28750301409313,1.13088916901578,3.82413504423008,2.55715457330331,2.28566849015516,1.46017136760982,1.83310854930569,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.229902104433473,0.540186389416048,1.9591626318643,1.36072998302656,1.15302348256365,0.937017245597288,1.03481348295606,1.94011193639558,3.02569728268511,2.11141348996739,1.09597866213787,2.78047249225598,2.43776516565517,1.85203922767149,1.59227413454795,0,0,0.852490498186778,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.787056926989615,0.154267112887378,0.232533944750408,1.07309360559848,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,1.47202963994889,1.3377599609307,0,0.264450566663544,0.213288250535234,1.62565670302307,0.902072229254653,1.4117846723634,1.11189021922435,0,0.949058123089023,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,1.51734320762465,1.25673363870702,2.25415471346161,0.203651327845314,0.775809948670503,1.1221731182451,0.758838445491087,0.442830443938806,0.156998727841375,0,0,0.667380422864376,0.786235980452812,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.358794827043824,0.964887042726734,0.923765950833023,1.32643988239339,0.977789858652155,1.52770577197669,1.17345124144251,1.17254380209271,0.714130922658041,0.780534591431195,0.788175720530955,0.664394068946325,1.11618338060241,0.327726629431476,0.863424909329478,0.289298117163023,0,0.54390568381871,0,0.275936746304732,1.28440471990234,1.17211686592203,1.96721934452011,0.504941854408746,0.94652465824877,0,1.29254038639679,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,0.584511715822624,1.58115111178609,3.21321316421807,1.41940085208269,1.78065603667255,1.30309567482861,2.3095817216155,0,1.21390318077491,1.209294227859,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,2.04263763452273,1.26042765821917,1.55230420539305,1.50035924522115,1.41872186913819,2.31879462882692,1.15184314421485,1.2178597964584,1.40803024838226,0,0,1.6488625294148,1.61464426695906,1.44751019827574,2.14870219205646,1.64140899745061,0.291480836629851,2.22510362412612,0,1.23832120777933,0.740778109478847,0.376736914009382,0.27338845544205,0,0.339956859987711,0.559805809294632,0.276399947608848,0,0.949007980743406,1.42323626988794,0.86404272657441,0.627264888043406,0.436725127492355,0.674321731924103,0.909188012978695,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.777804753376191,0.774958940866387,2.02747350588934,0.821500670520278,1.0416350787516,1.04859344425711,0.241584120826006,0,0,1.41907650703115,1.1298205288131,0.389762468933385,1.25318686967237,0.79472541912506,0.480781798079875,0.738447635872886,0.100966449948148,0.609654453239999,0.100826185136841,0.584747284438515,0.288635524920988,0.233753804363138,0.680191150845634,0.443971906748129,1.25599399253266,0.335769232728157,1.15913756419314,0.750729901804728,1.64836461840539,1.07184189539533,0.501572104035363,3.3885110557024,2.76195141904306,3.43737308063638,3.43706364687375,3.42541259885321,3.0215755895588,3.37511250115903,1.80128481289688,2.26571204492102,1.03552062350364,2.07574695168353,1.99512436700516,1.36586884603307,2.18796045361465,1.67690530102386,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,2.02157769411038,1.77435509923168,2.07488975524684,1.49826411951812,0.768301828858431,1.37845125493472,0.952587382566147,0.695305955669133,0.964546102318525,0.824171801606613,1.91358596174717,0.685738504770831,1.06485483695602,1.43061713968393,2.0348498328526,1.2234219453993,1.09998990259179,0.914639864363863,1.31534855718921,1.62964936615034,0,1.42362021749009,1.37906275325789,2.04615521584845,1.23949472948773,2.50778594275484,1.24905288968973,0.935726433781634,0.644613162144895,0.382576664137687,0.882365676478062,1.15933917810211
|short_description=p9@Atn1
}}

Latest revision as of 16:06, 26 September 2015

Short description:p9@Atn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Atn1_5end
Coexpression cluster:NA
Association with transcript: -438bp_to_ENSMUST00000088357_5end
EntrezGene:Atn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Atn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.91e-2054
brain4.38e-1947
future brain4.38e-1947
neural tube6.93e-1952
neural rod6.93e-1952
future spinal cord6.93e-1952
neural keel6.93e-1952
central nervous system1.32e-1873
regional part of brain2.78e-1846
nervous system1.64e-1775
ecto-epithelium1.37e-1673
anterior neural tube2.22e-1640
neurectoderm2.38e-1664
neural plate2.38e-1664
presumptive neural plate2.38e-1664
ectoderm-derived structure2.65e-1695
ectoderm2.65e-1695
presumptive ectoderm2.65e-1695
regional part of forebrain1.29e-1539
forebrain1.29e-1539
future forebrain1.29e-1539
pre-chordal neural plate1.75e-1449
brain grey matter9.03e-1229
regional part of telencephalon9.03e-1229
telencephalon9.03e-1229
gray matter1.25e-1134
cerebral cortex1.03e-1021
cerebral hemisphere1.03e-1021
pallium1.03e-1021
regional part of cerebral cortex4.47e-1017
occipital lobe5.01e-0810
visual cortex5.01e-0810
neocortex5.01e-0810
structure with developmental contribution from neural crest1.29e-0792
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