FFCP PHASE1:Mm9::chr17:51972603..51972624,-: Difference between revisions
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{{FFCP|EntrezGene=20230|HGNC=|MCL_coexpression_id=4|UniProt=Q60611|association_with_transcript=0bp_to_ENSMUST00000133574,NM_001163632,uc008czg.2_5end|description=CAGE_peak_9_at_Satb1_5end|id=chr17:51972603..51972624,-|ontology_enrichment_celltype=CL:0000838!1.03e-09!12;CL:0000084!4.36e-09!11;CL:0000827!4.36e-09!11;CL:0000542!1.56e-08!13;CL:0000051!1.56e-08!13;CL:0000791!6.86e-08!9;CL:0000789!6.86e-08!9;CL:0002420!6.86e-08!9;CL:0002419!6.86e-08!9;CL:0000790!6.86e-08!9;CL:0000624!3.78e-07!8;CL:0002031!6.75e-07!25;CL:0000988!7.01e-07!32;CL:0002032!7.01e-07!32;CL:0000037!7.01e-07!32;CL:0000566!7.01e-07!32;CL:0000837!7.01e-07!32|ontology_enrichment_celltype_v019_2=CL:0000838,4.58e-19,12;CL:0000084,1.03e-17,11;CL:0000827,1.03e-17,11;CL:0000542,2.34e-17,13;CL:0000051,2.34e-17,13;CL:0000791,3.76e-15,9;CL:0000789,3.76e-15,9;CL:0002420,3.76e-15,9;CL:0002419,3.76e-15,9;CL:0000790,3.76e-15,9;CL:0000624,1.45e-13,8;CL:0000738,1.53e-12,17;CL:0002087,1.53e-12,17;CL:0002031,2.73e-12,25;CL:0000893,1.78e-10,6;CL:0002489,1.78e-10,6;CL:0000898,1.78e-10,6;CL:0000809,1.78e-10,6;CL:0000810,1.78e-10,6;CL:0000895,1.78e-10,6;CL:0000808,1.78e-10,6;CL:0000894,1.78e-10,6;CL:0000806,1.78e-10,6;CL:0000807,1.78e-10,6;CL:0000805,1.78e-10,6;CL:0002425,1.78e-10,6;CL:0002436,1.78e-10,6;CL:0002427,1.78e-10,6;CL:0002428,1.78e-10,6;CL:0002429,1.78e-10,6;CL:0002433,1.78e-10,6;CL:0002431,1.78e-10,6;CL:0002432,1.78e-10,6;CL:0000988,9.26e-09,32;CL:0002032,9.26e-09,32;CL:0000037,9.26e-09,32;CL:0000837,9.26e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.34e-14!29;UBERON:0002193!6.36e-13!48;UBERON:0002370!7.75e-13!23;UBERON:0000974!7.75e-13!23;UBERON:0004807!7.75e-13!23;UBERON:0005058!7.75e-13!23;UBERON:0003351!7.75e-13!23;UBERON:0009113!7.75e-13!23;UBERON:0003295!7.75e-13!23;UBERON:0009722!7.75e-13!23;UBERON:0005562!7.75e-13!23;UBERON:0007690!7.75e-13!23;UBERON:0002390!9.30e-13!45;UBERON:0003061!9.30e-13!45;UBERON:0000153!4.99e-12!94;UBERON:0006562!7.00e-12!24;UBERON:0003408!7.00e-12!24;UBERON:0001557!7.00e-12!24;UBERON:0001042!7.00e-12!24;UBERON:0008814!7.00e-12!24;UBERON:0009145!7.00e-12!24;UBERON:0007811!1.23e-11!86;UBERON:0000072!1.74e-09!27;UBERON:0000064!1.05e-07!99;UBERON:0002021!4.62e-07!10;UBERON:0000411!4.62e-07!10;UBERON:0001950!4.62e-07!10;UBERON:0000063!6.40e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.32e-26,23;UBERON:0000974,5.32e-26,23;UBERON:0004807,5.32e-26,23;UBERON:0005058,5.32e-26,23;UBERON:0003351,5.32e-26,23;UBERON:0009113,5.32e-26,23;UBERON:0003295,5.32e-26,23;UBERON:0009722,5.32e-26,23;UBERON:0005562,5.32e-26,23;UBERON:0007690,5.32e-26,23;UBERON:0004177,1.09e-25,29;UBERON:0005057,1.09e-25,29;UBERON:0006562,1.13e-24,24;UBERON:0003408,1.13e-24,24;UBERON:0001557,1.13e-24,24;UBERON:0001042,1.13e-24,24;UBERON:0008814,1.13e-24,24;UBERON:0009145,1.13e-24,24;UBERON:0000072,2.71e-21,27;UBERON:0000077,3.63e-20,35;UBERON:0002193,3.11e-19,48;UBERON:0002405,3.11e-19,48;UBERON:0002390,4.00e-19,45;UBERON:0003061,4.00e-19,45;UBERON:0007811,4.48e-16,36;UBERON:0000153,1.59e-12,43;UBERON:0000065,4.03e-12,41;UBERON:0001004,1.05e-11,42;UBERON:0002021,3.43e-09,10;UBERON:0000411,3.43e-09,10;UBERON:0001950,3.43e-09,10;UBERON:0000490,6.72e-09,66;UBERON:0003929,1.26e-08,55;UBERON:0002368,1.80e-07,60|phase1_expression=0.320297694209588,0,0,0,0,0,0,4.51931632045517,7.88416844049334,11.7032263160997,2.22583358693156,3.43020283679947,9.24483941628511,7.95525662012876,0.666219523631325,0.607425802169478,0.699561878128147,3.3123527362615,3.01651753932625,3.81950686618227,0.595303031057488,1.78723712161594,3.91799683708403,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,1.5626706890476,3.14114246384279,4.1176204162171,2.73218193983378,1.94204141212461,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,3.18786951509699,9.42970784614748,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.5709193985953,5.95557132388495,0.445326417194474,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0.449371918214468,0.457500602818626,0.125654352112864,2.25971616249959,0.255715457330331,0.20778804455956,0.811206315338788,0.101839363850316,0.124406970610093,0.252722758433675,1.26265113531884,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20230 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q60611 | |||
|association_with_transcript=0bp_to_ENSMUST00000133574,NM_001163632,uc008czg.2_5end | |||
|cluster_id=chr17:51972603..51972624,- | |||
|description=CAGE_peak_9_at_Satb1_5end | |||
|id=chr17:51972603..51972624,- | |||
|ontology_enrichment_celltype=CL:0000838!1.03e-09!12;CL:0000084!4.36e-09!11;CL:0000827!4.36e-09!11;CL:0000542!1.56e-08!13;CL:0000051!1.56e-08!13;CL:0000791!6.86e-08!9;CL:0000789!6.86e-08!9;CL:0002420!6.86e-08!9;CL:0002419!6.86e-08!9;CL:0000790!6.86e-08!9;CL:0000624!3.78e-07!8;CL:0002031!6.75e-07!25;CL:0000988!7.01e-07!32;CL:0002032!7.01e-07!32;CL:0000037!7.01e-07!32;CL:0000566!7.01e-07!32;CL:0000837!7.01e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.58e-19,12;CL:0000084,1.03e-17,11;CL:0000827,1.03e-17,11;CL:0000542,2.34e-17,13;CL:0000051,2.34e-17,13;CL:0000791,3.76e-15,9;CL:0000789,3.76e-15,9;CL:0002420,3.76e-15,9;CL:0002419,3.76e-15,9;CL:0000790,3.76e-15,9;CL:0000624,1.45e-13,8;CL:0000738,1.53e-12,17;CL:0002087,1.53e-12,17;CL:0002031,2.73e-12,25;CL:0000893,1.78e-10,6;CL:0002489,1.78e-10,6;CL:0000898,1.78e-10,6;CL:0000809,1.78e-10,6;CL:0000810,1.78e-10,6;CL:0000895,1.78e-10,6;CL:0000808,1.78e-10,6;CL:0000894,1.78e-10,6;CL:0000806,1.78e-10,6;CL:0000807,1.78e-10,6;CL:0000805,1.78e-10,6;CL:0002425,1.78e-10,6;CL:0002436,1.78e-10,6;CL:0002427,1.78e-10,6;CL:0002428,1.78e-10,6;CL:0002429,1.78e-10,6;CL:0002433,1.78e-10,6;CL:0002431,1.78e-10,6;CL:0002432,1.78e-10,6;CL:0000988,9.26e-09,32;CL:0002032,9.26e-09,32;CL:0000037,9.26e-09,32;CL:0000837,9.26e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.34e-14!29;UBERON:0002193!6.36e-13!48;UBERON:0002370!7.75e-13!23;UBERON:0000974!7.75e-13!23;UBERON:0004807!7.75e-13!23;UBERON:0005058!7.75e-13!23;UBERON:0003351!7.75e-13!23;UBERON:0009113!7.75e-13!23;UBERON:0003295!7.75e-13!23;UBERON:0009722!7.75e-13!23;UBERON:0005562!7.75e-13!23;UBERON:0007690!7.75e-13!23;UBERON:0002390!9.30e-13!45;UBERON:0003061!9.30e-13!45;UBERON:0000153!4.99e-12!94;UBERON:0006562!7.00e-12!24;UBERON:0003408!7.00e-12!24;UBERON:0001557!7.00e-12!24;UBERON:0001042!7.00e-12!24;UBERON:0008814!7.00e-12!24;UBERON:0009145!7.00e-12!24;UBERON:0007811!1.23e-11!86;UBERON:0000072!1.74e-09!27;UBERON:0000064!1.05e-07!99;UBERON:0002021!4.62e-07!10;UBERON:0000411!4.62e-07!10;UBERON:0001950!4.62e-07!10;UBERON:0000063!6.40e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.32e-26,23;UBERON:0000974,5.32e-26,23;UBERON:0004807,5.32e-26,23;UBERON:0005058,5.32e-26,23;UBERON:0003351,5.32e-26,23;UBERON:0009113,5.32e-26,23;UBERON:0003295,5.32e-26,23;UBERON:0009722,5.32e-26,23;UBERON:0005562,5.32e-26,23;UBERON:0007690,5.32e-26,23;UBERON:0004177,1.09e-25,29;UBERON:0005057,1.09e-25,29;UBERON:0006562,1.13e-24,24;UBERON:0003408,1.13e-24,24;UBERON:0001557,1.13e-24,24;UBERON:0001042,1.13e-24,24;UBERON:0008814,1.13e-24,24;UBERON:0009145,1.13e-24,24;UBERON:0000072,2.71e-21,27;UBERON:0000077,3.63e-20,35;UBERON:0002193,3.11e-19,48;UBERON:0002405,3.11e-19,48;UBERON:0002390,4.00e-19,45;UBERON:0003061,4.00e-19,45;UBERON:0007811,4.48e-16,36;UBERON:0000153,1.59e-12,43;UBERON:0000065,4.03e-12,41;UBERON:0001004,1.05e-11,42;UBERON:0002021,3.43e-09,10;UBERON:0000411,3.43e-09,10;UBERON:0001950,3.43e-09,10;UBERON:0000490,6.72e-09,66;UBERON:0003929,1.26e-08,55;UBERON:0002368,1.80e-07,60 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,4.51931632045517,7.88416844049334,11.7032263160997,2.22583358693156,3.43020283679947,9.24483941628511,7.95525662012876,0.666219523631325,0.607425802169478,0.699561878128147,3.3123527362615,3.01651753932625,3.81950686618227,0.595303031057488,1.78723712161594,3.91799683708403,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,1.5626706890476,3.14114246384279,4.1176204162171,2.73218193983378,1.94204141212461,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,3.18786951509699,9.42970784614748,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.5709193985953,5.95557132388495,0.445326417194474,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0.449371918214468,0.457500602818626,0.125654352112864,2.25971616249959,0.255715457330331,0.20778804455956,0.811206315338788,0.101839363850316,0.124406970610093,0.252722758433675,1.26265113531884,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0.16488625294148,1.29171541356724,0.663442174209714,0.119372344003136,0,0,1.11255181206306,1.36696704638282,0,0.370389054739423,0.753473828018764,1.0935538217682,1.60144721244566,1.35982743995084,0.839708713941948,0.829199842826543,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,13.5884781870117,0.608175645870493,2.46506297195585,5.3267537420896,10.3835483487139,9.73538638428198,13.9426721443164,12.2582307554899,15.1449674922221,19.127908470405,14.8214492151156,16.0805503220591,13.2772341463655,18.5834274468695,0,0,0.448569283047378,0,0.386379188064381,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,4.01026859407578,2.06223818812425,4.11049511862385,2.2661816921691,1.35004500046361,2.70192721934532,2.71885445390523,4.65984280576638,0,0,0.341467211508268,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,1.01391719956096,0,0.187283014939765,0.384150914429216,0.34461281373368,0,0,0,0,0.294397840268795,0.685738504770831,0,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.543216455383447,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p9@Satb1 | |||
}} |
Latest revision as of 16:07, 26 September 2015
Short description: | p9@Satb1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Satb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_ENSMUST00000133574, NM_001163632, uc008czg.2_5end |
EntrezGene: | Satb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.32e-26 | 23 |
neck | 5.32e-26 | 23 |
respiratory system epithelium | 5.32e-26 | 23 |
hemolymphoid system gland | 5.32e-26 | 23 |
pharyngeal epithelium | 5.32e-26 | 23 |
thymic region | 5.32e-26 | 23 |
pharyngeal gland | 5.32e-26 | 23 |
entire pharyngeal arch endoderm | 5.32e-26 | 23 |
thymus primordium | 5.32e-26 | 23 |
early pharyngeal endoderm | 5.32e-26 | 23 |
hemopoietic organ | 1.09e-25 | 29 |
immune organ | 1.09e-25 | 29 |
pharynx | 1.13e-24 | 24 |
gland of gut | 1.13e-24 | 24 |
upper respiratory tract | 1.13e-24 | 24 |
chordate pharynx | 1.13e-24 | 24 |
pharyngeal arch system | 1.13e-24 | 24 |
pharyngeal region of foregut | 1.13e-24 | 24 |
segment of respiratory tract | 2.71e-21 | 27 |
mixed endoderm/mesoderm-derived structure | 3.63e-20 | 35 |
hemolymphoid system | 3.11e-19 | 48 |
immune system | 3.11e-19 | 48 |
hematopoietic system | 4.00e-19 | 45 |
blood island | 4.00e-19 | 45 |
craniocervical region | 4.48e-16 | 36 |
anterior region of body | 1.59e-12 | 43 |
respiratory tract | 4.03e-12 | 41 |
respiratory system | 1.05e-11 | 42 |
occipital lobe | 3.43e-09 | 10 |
visual cortex | 3.43e-09 | 10 |
neocortex | 3.43e-09 | 10 |
unilaminar epithelium | 6.72e-09 | 66 |
gut epithelium | 1.26e-08 | 55 |
endocrine gland | 1.80e-07 | 60 |