FFCP PHASE1:Mm9::chr1:164408077..164408132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103967 | |EntrezGene=103967 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENSMUST00000161155_5end | |association_with_transcript=10bp_to_ENSMUST00000161155_5end | ||
|cluster_id=chr1:164408077..164408132,- | |||
|description=CAGE_peak_1_at_Dnm3_5end | |description=CAGE_peak_1_at_Dnm3_5end | ||
|id=chr1:164408077..164408132,- | |id=chr1:164408077..164408132,- | ||
|ontology_enrichment_celltype=CL:0000540!7.92e-13!33;CL:0000047!7.92e-13!33;CL:0000031!7.92e-13!33;CL:0000404!7.92e-13!33;CL:0000117!4.36e-12!23;CL:0000337!4.36e-12!23;CL:0000221!5.80e-10!44;CL:0000133!5.80e-10!44;CL:0002319!8.47e-10!43;CL:0000393!4.27e-08!39;CL:0000211!4.27e-08!39 | |ontology_enrichment_celltype=CL:0000540!7.92e-13!33;CL:0000047!7.92e-13!33;CL:0000031!7.92e-13!33;CL:0000404!7.92e-13!33;CL:0000117!4.36e-12!23;CL:0000337!4.36e-12!23;CL:0000221!5.80e-10!44;CL:0000133!5.80e-10!44;CL:0002319!8.47e-10!43;CL:0000393!4.27e-08!39;CL:0000211!4.27e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.48e-13,33;CL:0000047,5.48e-13,33;CL:0000031,5.48e-13,33;CL:0000404,5.48e-13,33;CL:0000117,3.09e-12,23;CL:0000337,3.09e-12,23;CL:0000221,4.41e-10,44;CL:0000133,4.41e-10,44;CL:0002319,6.47e-10,43;CL:0000393,2.13e-08,39;CL:0000211,2.13e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.14e-25!102;UBERON:0000924!5.14e-25!102;UBERON:0006601!5.14e-25!102;UBERON:0001017!1.76e-23!73;UBERON:0005743!1.76e-23!73;UBERON:0000073!4.85e-23!75;UBERON:0001016!4.85e-23!75;UBERON:0002346!1.64e-21!71;UBERON:0003075!1.64e-21!71;UBERON:0007284!1.64e-21!71;UBERON:0000033!3.21e-19!63;UBERON:0001049!1.13e-18!52;UBERON:0005068!1.13e-18!52;UBERON:0006241!1.13e-18!52;UBERON:0007135!1.13e-18!52;UBERON:0000955!9.35e-18!50;UBERON:0006238!9.35e-18!50;UBERON:0002616!3.94e-17!49;UBERON:0002020!3.37e-15!34;UBERON:0003056!8.24e-15!49;UBERON:0003080!4.23e-13!40;UBERON:0002780!1.90e-12!39;UBERON:0001890!1.90e-12!39;UBERON:0006240!1.90e-12!39;UBERON:0002791!2.04e-12!29;UBERON:0003528!2.04e-12!29;UBERON:0001893!2.04e-12!29;UBERON:0000468!1.29e-10!333;UBERON:0000956!4.22e-08!21;UBERON:0001869!4.22e-08!21;UBERON:0000203!4.22e-08!21;UBERON:0000922!1.05e-07!328;UBERON:0002619!5.94e-07!17;UBERON:0002021!9.06e-07!10;UBERON:0000411!9.06e-07!10;UBERON:0001950!9.06e-07!10 | |ontology_enrichment_uberon=UBERON:0004121!5.14e-25!102;UBERON:0000924!5.14e-25!102;UBERON:0006601!5.14e-25!102;UBERON:0001017!1.76e-23!73;UBERON:0005743!1.76e-23!73;UBERON:0000073!4.85e-23!75;UBERON:0001016!4.85e-23!75;UBERON:0002346!1.64e-21!71;UBERON:0003075!1.64e-21!71;UBERON:0007284!1.64e-21!71;UBERON:0000033!3.21e-19!63;UBERON:0001049!1.13e-18!52;UBERON:0005068!1.13e-18!52;UBERON:0006241!1.13e-18!52;UBERON:0007135!1.13e-18!52;UBERON:0000955!9.35e-18!50;UBERON:0006238!9.35e-18!50;UBERON:0002616!3.94e-17!49;UBERON:0002020!3.37e-15!34;UBERON:0003056!8.24e-15!49;UBERON:0003080!4.23e-13!40;UBERON:0002780!1.90e-12!39;UBERON:0001890!1.90e-12!39;UBERON:0006240!1.90e-12!39;UBERON:0002791!2.04e-12!29;UBERON:0003528!2.04e-12!29;UBERON:0001893!2.04e-12!29;UBERON:0000468!1.29e-10!333;UBERON:0000956!4.22e-08!21;UBERON:0001869!4.22e-08!21;UBERON:0000203!4.22e-08!21;UBERON:0000922!1.05e-07!328;UBERON:0002619!5.94e-07!17;UBERON:0002021!9.06e-07!10;UBERON:0000411!9.06e-07!10;UBERON:0001950!9.06e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.08e-24,95;UBERON:0000924,2.08e-24,95;UBERON:0006601,2.08e-24,95;UBERON:0001017,8.57e-24,73;UBERON:0001016,2.40e-23,75;UBERON:0002346,2.93e-21,64;UBERON:0003075,2.93e-21,64;UBERON:0007284,2.93e-21,64;UBERON:0010371,2.54e-20,73;UBERON:0000073,2.67e-20,54;UBERON:0001049,6.46e-19,52;UBERON:0005068,6.46e-19,52;UBERON:0006241,6.46e-19,52;UBERON:0007135,6.46e-19,52;UBERON:0010314,1.21e-16,92;UBERON:0000955,6.07e-16,47;UBERON:0006238,6.07e-16,47;UBERON:0002020,2.16e-15,34;UBERON:0002616,2.50e-15,46;UBERON:0003056,5.35e-15,49;UBERON:0003080,2.90e-13,40;UBERON:0002780,1.33e-12,39;UBERON:0001890,1.33e-12,39;UBERON:0006240,1.33e-12,39;UBERON:0003528,1.43e-12,29;UBERON:0002791,1.43e-12,29;UBERON:0001893,1.43e-12,29;UBERON:0000956,3.41e-08,21;UBERON:0001869,3.41e-08,21;UBERON:0000203,3.41e-08,21;UBERON:0002619,4.98e-07,17;UBERON:0002021,7.63e-07,10;UBERON:0000411,7.63e-07,10;UBERON:0001950,7.63e-07,10 | |||
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| ||
|short_description=p1@Dnm3 | |short_description=p1@Dnm3 | ||
}} | }} |
Latest revision as of 16:15, 26 September 2015
Short description: | p1@Dnm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 10bp_to_ENSMUST00000161155_5end |
EntrezGene: | Dnm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.48e-13 | 33 |
neuronal stem cell | 5.48e-13 | 33 |
neuroblast | 5.48e-13 | 33 |
electrically signaling cell | 5.48e-13 | 33 |
CNS neuron (sensu Vertebrata) | 3.09e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.09e-12 | 23 |
ectodermal cell | 4.41e-10 | 44 |
neurectodermal cell | 4.41e-10 | 44 |
neural cell | 6.47e-10 | 43 |
electrically responsive cell | 2.13e-08 | 39 |
electrically active cell | 2.13e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.08e-24 | 95 |
ectoderm | 2.08e-24 | 95 |
presumptive ectoderm | 2.08e-24 | 95 |
central nervous system | 8.57e-24 | 73 |
nervous system | 2.40e-23 | 75 |
neurectoderm | 2.93e-21 | 64 |
neural plate | 2.93e-21 | 64 |
presumptive neural plate | 2.93e-21 | 64 |
ecto-epithelium | 2.54e-20 | 73 |
regional part of nervous system | 2.67e-20 | 54 |
neural tube | 6.46e-19 | 52 |
neural rod | 6.46e-19 | 52 |
future spinal cord | 6.46e-19 | 52 |
neural keel | 6.46e-19 | 52 |
structure with developmental contribution from neural crest | 1.21e-16 | 92 |
brain | 6.07e-16 | 47 |
future brain | 6.07e-16 | 47 |
gray matter | 2.16e-15 | 34 |
regional part of brain | 2.50e-15 | 46 |
pre-chordal neural plate | 5.35e-15 | 49 |
anterior neural tube | 2.90e-13 | 40 |
regional part of forebrain | 1.33e-12 | 39 |
forebrain | 1.33e-12 | 39 |
future forebrain | 1.33e-12 | 39 |
brain grey matter | 1.43e-12 | 29 |
regional part of telencephalon | 1.43e-12 | 29 |
telencephalon | 1.43e-12 | 29 |
cerebral cortex | 3.41e-08 | 21 |
cerebral hemisphere | 3.41e-08 | 21 |
pallium | 3.41e-08 | 21 |
regional part of cerebral cortex | 4.98e-07 | 17 |
occipital lobe | 7.63e-07 | 10 |
visual cortex | 7.63e-07 | 10 |
neocortex | 7.63e-07 | 10 |