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FFCP PHASE1:Mm9::chr2:37631801..37631817,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241324
|EntrezGene=241324
|HGNC=
|HGNC=
|MCL_coexpression_id=310
|MCL_coexpression_id=310
|TSSclassifier=NA
|UniProt=Q80YA8
|UniProt=Q80YA8
|association_with_transcript=32bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end
|association_with_transcript=32bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end
|cluster_id=chr2:37631801..37631817,+
|description=CAGE_peak_2_at_Crb2_5end
|description=CAGE_peak_2_at_Crb2_5end
|id=chr2:37631801..37631817,+
|id=chr2:37631801..37631817,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,1.45e-12,8;CL:0002319,3.17e-11,43;CL:0000221,7.36e-11,44;CL:0000133,7.36e-11,44;CL:0002609,6.26e-10,6;CL:0000333,9.04e-10,10;CL:0000095,9.04e-10,10;CL:0000243,9.04e-10,10;CL:0000123,9.04e-10,10;CL:0000125,9.04e-10,10;CL:0000030,9.04e-10,10;CL:0000339,9.04e-10,10;CL:0000128,3.40e-09,6;CL:0000126,3.40e-09,6;CL:0000127,3.40e-09,6;CL:0000117,2.09e-08,23;CL:0000337,2.09e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!7.26e-11!49;UBERON:0000033!6.72e-10!63;UBERON:0002346!3.23e-09!71;UBERON:0003075!3.23e-09!71;UBERON:0007284!3.23e-09!71;UBERON:0000970!3.49e-08!9;UBERON:0000019!3.49e-08!9;UBERON:0000047!3.49e-08!9;UBERON:0004088!3.49e-08!9;UBERON:0002104!3.49e-08!9;UBERON:0001456!3.49e-08!9;UBERON:0003072!3.49e-08!9;UBERON:0003071!3.49e-08!9;UBERON:0004128!3.49e-08!9;UBERON:0004121!7.07e-07!102;UBERON:0000924!7.07e-07!102;UBERON:0006601!7.07e-07!102;UBERON:0001049!9.56e-07!52;UBERON:0005068!9.56e-07!52;UBERON:0006241!9.56e-07!52;UBERON:0007135!9.56e-07!52
|ontology_enrichment_uberon=UBERON:0003056!7.26e-11!49;UBERON:0000033!6.72e-10!63;UBERON:0002346!3.23e-09!71;UBERON:0003075!3.23e-09!71;UBERON:0007284!3.23e-09!71;UBERON:0000970!3.49e-08!9;UBERON:0000019!3.49e-08!9;UBERON:0000047!3.49e-08!9;UBERON:0004088!3.49e-08!9;UBERON:0002104!3.49e-08!9;UBERON:0001456!3.49e-08!9;UBERON:0003072!3.49e-08!9;UBERON:0003071!3.49e-08!9;UBERON:0004128!3.49e-08!9;UBERON:0004121!7.07e-07!102;UBERON:0000924!7.07e-07!102;UBERON:0006601!7.07e-07!102;UBERON:0001049!9.56e-07!52;UBERON:0005068!9.56e-07!52;UBERON:0006241!9.56e-07!52;UBERON:0007135!9.56e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.39e-24,49;UBERON:0002346,1.47e-18,64;UBERON:0003075,1.47e-18,64;UBERON:0007284,1.47e-18,64;UBERON:0004121,4.22e-18,95;UBERON:0000924,4.22e-18,95;UBERON:0006601,4.22e-18,95;UBERON:0000970,1.32e-17,9;UBERON:0000019,1.32e-17,9;UBERON:0000047,1.32e-17,9;UBERON:0010312,1.32e-17,9;UBERON:0004088,1.32e-17,9;UBERON:0002104,1.32e-17,9;UBERON:0001456,1.32e-17,9;UBERON:0003072,1.32e-17,9;UBERON:0004128,1.32e-17,9;UBERON:0003071,1.32e-17,9;UBERON:0010371,2.59e-15,73;UBERON:0001444,5.15e-14,11;UBERON:0000020,1.14e-12,12;UBERON:0001032,1.14e-12,12;UBERON:0004456,1.14e-12,12;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,1.35e-12,92;UBERON:0003080,3.45e-12,40;UBERON:0001017,3.70e-12,73;UBERON:0001016,1.20e-11,75;UBERON:0000033,1.56e-11,13;UBERON:0005085,1.56e-11,13;UBERON:0002616,1.91e-11,46;UBERON:0000955,4.31e-11,47;UBERON:0006238,4.31e-11,47;UBERON:0000007,7.62e-11,8;UBERON:0003296,7.62e-11,8;UBERON:0010133,7.62e-11,8;UBERON:0000073,5.25e-10,54;UBERON:0001049,1.54e-09,52;UBERON:0005068,1.54e-09,52;UBERON:0006241,1.54e-09,52;UBERON:0007135,1.54e-09,52;UBERON:0001954,2.10e-09,7;UBERON:0003022,2.10e-09,7;UBERON:0002421,2.10e-09,7;UBERON:0000349,2.10e-09,7;UBERON:0002600,2.10e-09,7;UBERON:0001894,1.96e-08,10;UBERON:0006222,1.96e-08,10
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3518867285335,13.4008571468028,14.5822424305713,6.01941612989059,8.62515386189829,0,0,0,0,0.286533439938757,1.54701627683233,3.23706337375356,0.528990979272033,1.26766280701236,1.69422266034566,0,0,0,0,2.39680088414724,9.22123932771731,2.38486108309499,1.62007125998029,1.68259969081106,0,0.220868540951614,1.95985278743926,1.43768206527355,2.75765635983006,1.10115880999389,0,0,2.76961204233407,2.37867873366265,2.6045668527838,0,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0,0,0.41557608911912,0,1.01839363850316,0,0,2.94618598241064,4.94457683258274,6.20735681970377,5.40186389416048,3.76762044589288,8.70867189136997,4.09963904911519,3.84177070694888,5.95017752699736,0.646703978798527,0,0,0,0,0,0,0.995171334092466,0,0,0,2.48550927042602,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0.841159794256509,2.16099685996497,0,0,1.91959425481711,2.09013004674395,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,1.14248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.24645922567079,0.81443479676788,0,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0.680879211507576,3.6012218806262,3.36332577835162,1.92903331528433,3.3694644392032,2.67553226403106,2.13913726782757,2.74018454203139,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.448569283047378,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0.644613162144895,0,0.220591419119515,0
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3518867285335,13.4008571468028,14.5822424305713,6.01941612989059,8.62515386189829,0,0,0,0,0.286533439938757,1.54701627683233,3.23706337375356,0.528990979272033,1.26766280701236,1.69422266034566,0,0,0,0,2.39680088414724,9.22123932771731,2.38486108309499,1.62007125998029,1.68259969081106,0,0.220868540951614,1.95985278743926,1.43768206527355,2.75765635983006,1.10115880999389,0,0,2.76961204233407,2.37867873366265,2.6045668527838,0,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0,0,0.41557608911912,0,1.01839363850316,0,0,2.94618598241064,4.94457683258274,6.20735681970377,5.40186389416048,3.76762044589288,8.70867189136997,4.09963904911519,3.84177070694888,5.95017752699736,0.646703978798527,0,0,0,0,0,0,0.995171334092466,0,0,0,2.48550927042602,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0.841159794256509,2.16099685996497,0,0,1.91959425481711,2.09013004674395,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,1.14248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.24645922567079,0.81443479676788,0,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0.680879211507576,3.6012218806262,3.36332577835162,1.92903331528433,3.3694644392032,2.67553226403106,2.13913726782757,2.74018454203139,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.448569283047378,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0.644613162144895,0,0.220591419119515,0
|short_description=p2@Crb2
|short_description=p2@Crb2
}}
}}

Latest revision as of 16:32, 26 September 2015

Short description:p2@Crb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Crb2_5end
Coexpression cluster:MCL_coexpression_mm9:310
Association with transcript: 32bp_to_ENSMUST00000050372, NM_001163566, uc008jnf.2_5end
EntrezGene:Crb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Crb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C68.71
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate2.39e-2449
neurectoderm1.47e-1864
neural plate1.47e-1864
presumptive neural plate1.47e-1864
ectoderm-derived structure4.22e-1895
ectoderm4.22e-1895
presumptive ectoderm4.22e-1895
eye1.32e-179
camera-type eye1.32e-179
simple eye1.32e-179
immature eye1.32e-179
ocular region1.32e-179
visual system1.32e-179
face1.32e-179
optic cup1.32e-179
optic vesicle1.32e-179
eye primordium1.32e-179
ecto-epithelium2.59e-1573
subdivision of head5.15e-1411
sense organ1.14e-1212
sensory system1.14e-1212
entire sense organ system1.14e-1212
regional part of forebrain1.26e-1239
forebrain1.26e-1239
future forebrain1.26e-1239
structure with developmental contribution from neural crest1.35e-1292
anterior neural tube3.45e-1240
central nervous system3.70e-1273
nervous system1.20e-1175
head1.56e-1113
ectodermal placode1.56e-1113
regional part of brain1.91e-1146
brain4.31e-1147
future brain4.31e-1147
pituitary gland7.62e-118
gland of diencephalon7.62e-118
neuroendocrine gland7.62e-118
regional part of nervous system5.25e-1054
neural tube1.54e-0952
neural rod1.54e-0952
future spinal cord1.54e-0952
neural keel1.54e-0952
Ammon's horn2.10e-097
lobe parts of cerebral cortex2.10e-097
hippocampal formation2.10e-097
limbic system2.10e-097
limbic lobe2.10e-097
diencephalon1.96e-0810
future diencephalon1.96e-0810
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