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FFCP PHASE1:Mm9::chr2:38206580..38206600,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:38206580..38206600,+ |short_description=p2@Lhx2 |description=CAGE_peak_2_at_Lhx2_5end |association_with_transcript=-227bp_to_ENSMUST00000000253,NM_010710,u...")
 
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{{FFCP
{{FFCP
|id=chr2:38206580..38206600,+
|DHSsupport=NA
|short_description=p2@Lhx2
|DPIdataset=NA
|description=CAGE_peak_2_at_Lhx2_5end
|association_with_transcript=-227bp_to_ENSMUST00000000253,NM_010710,uc008jnl.1_5end
|EntrezGene=16870
|EntrezGene=16870
|HGNC=
|HGNC=
|MCL_coexpression_id=2347
|TSSclassifier=NA
|UniProt=Q9Z0S2,Q543C6
|UniProt=Q9Z0S2,Q543C6
|association_with_transcript=-227bp_to_ENSMUST00000000253,NM_010710,uc008jnl.1_5end
|cluster_id=chr2:38206580..38206600,+
|description=CAGE_peak_2_at_Lhx2_5end
|id=chr2:38206580..38206600,+
|ontology_enrichment_celltype=CL:0000117!2.49e-07!23;CL:0000337!2.49e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.26e-07,23;CL:0000337,9.26e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.81e-24!49;UBERON:0000033!1.12e-20!63;UBERON:0003080!1.83e-18!40;UBERON:0002780!2.96e-18!39;UBERON:0001890!2.96e-18!39;UBERON:0006240!2.96e-18!39;UBERON:0000955!1.34e-17!50;UBERON:0006238!1.34e-17!50;UBERON:0002616!3.00e-17!49;UBERON:0002346!7.60e-17!71;UBERON:0003075!7.60e-17!71;UBERON:0007284!7.60e-17!71;UBERON:0002791!2.03e-16!29;UBERON:0003528!2.03e-16!29;UBERON:0001893!2.03e-16!29;UBERON:0000153!2.16e-16!94;UBERON:0004121!5.24e-16!102;UBERON:0000924!5.24e-16!102;UBERON:0006601!5.24e-16!102;UBERON:0001049!2.22e-15!52;UBERON:0005068!2.22e-15!52;UBERON:0006241!2.22e-15!52;UBERON:0007135!2.22e-15!52;UBERON:0002020!1.77e-14!34;UBERON:0000956!2.77e-14!21;UBERON:0001869!2.77e-14!21;UBERON:0000203!2.77e-14!21;UBERON:0001017!1.14e-13!73;UBERON:0005743!1.14e-13!73;UBERON:0007811!1.61e-13!86;UBERON:0000073!1.29e-12!75;UBERON:0001016!1.29e-12!75;UBERON:0002619!2.35e-11!17;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.34e-27,49;UBERON:0003080,1.27e-20,40;UBERON:0002780,2.32e-20,39;UBERON:0001890,2.32e-20,39;UBERON:0006240,2.32e-20,39;UBERON:0010371,1.22e-19,73;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0002346,1.72e-18,64;UBERON:0003075,1.72e-18,64;UBERON:0007284,1.72e-18,64;UBERON:0000955,9.64e-18,47;UBERON:0006238,9.64e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0004121,4.63e-17,95;UBERON:0000924,4.63e-17,95;UBERON:0006601,4.63e-17,95;UBERON:0000956,5.19e-17,21;UBERON:0001869,5.19e-17,21;UBERON:0000203,5.19e-17,21;UBERON:0000073,2.54e-15,54;UBERON:0002020,6.19e-15,34;UBERON:0001049,3.33e-14,52;UBERON:0005068,3.33e-14,52;UBERON:0006241,3.33e-14,52;UBERON:0007135,3.33e-14,52;UBERON:0002619,1.88e-13,17;UBERON:0001017,5.83e-12,73;UBERON:0001016,3.39e-11,75;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0000970,8.74e-08,9;UBERON:0000019,8.74e-08,9;UBERON:0000047,8.74e-08,9;UBERON:0010312,8.74e-08,9;UBERON:0004088,8.74e-08,9;UBERON:0002104,8.74e-08,9;UBERON:0001456,8.74e-08,9;UBERON:0003072,8.74e-08,9;UBERON:0004128,8.74e-08,9;UBERON:0003071,8.74e-08,9;UBERON:0010314,1.45e-07,92
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.111830832275,2.10658073689794,0,0,0,0.262261207256992,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,34.2299495517301,21.3095597252438,17.6931208157598,2.93971485413261,0,0,0,0,0,0,0,63.9320016316329,39.1453324661304,65.9184659646426,0.677689064138264,0,0,0,0,0.898800331555214,1.92109152660777,124.945982831716,115.0250594586,135.44927511029,0,0.220868540951614,22.5383070555515,20.1275489138296,34.9303138911808,2.20231761998777,3.70293280447044,1.99688493233117,33.1034582202787,21.0421580285542,41.6730696445408,0.837548997004143,1.12552522006336,2.44477196442896,1.17851434189467,0.427115042397309,0.559198337475902,0,0,1.15945795480671,6.88339101585109,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,1.25602267690966,1.03575153458869,0,0.867426633830679,0,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,5.09288173976397,8.23501085073528,7.413606774659,34.0695667576862,24.2929684463814,2.70124457927428,6.32740925964255,0.203678727700633,0,0,6.52369753248069,40.2072168754754,28.5078609497506,41.5943519850357,39.3339574551216,51.8438123533118,51.7579429950793,47.8815812500214,11.3829483125167,43.760302565367,27.231275544166,22.6976950171494,7.45265490253754,7.50727572909114,3.1342694986995,3.70407845534298,0,0,0,0,0.828503090142008,0.703578179943289,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,26.7068234676442,67.4025211084313,0.330418782983798,0,0.853153002140936,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,3.85388415213294,6.17326891149548,4.12773889737726,2.02375901146368,3.44862206360455,3.13530307678142,1.78238096246994,2.87696137450811,5.35046248357617,1.37280706594041,25.8782771749238,6.32639611036456,5.92871578917665,5.80931419278357,2.69096120282868,4.82443521363367,0,1.32643988239339,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,7.06906896127976,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,15.8453762747553,15.3936833701478,12.8602221018955,2.48276327099183,4.10248280484762,2.13913726782757,3.95804433848979,0.469343416127421,2.54198485036584,0,49.9605346412685,31.9699564857893,29.4930202898682,28.5299902167496,30.5302073525814,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0.276399947608848,0.954670618015114,1.42351197111511,0,0.108005340821801,0,0,0.404593039154462,0.743881101528023,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0,0.651021924219751,2.72634295506848,2.41584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,33.3203587144069,37.2863441570813,37.2382083735608,49.6655696973257,29.4585483501376,47.5898155355511,33.7511250115903,40.9792294934041,33.9856806738153,32.1011393286128,20.2385327789145,36.7102883528949,17.4148277869217,10.6966955510049,15.7209871970987,9.74370594785075,8.00088220085815,7.62329711783909,6.4183841918363,7.58091635291392,6.33698249725599,7.1678009726709,7.86588662747012,6.21043978327232,5.39893408182765,10.4784612082276,7.3007125345259,6.17309505483856,7.41754621445952,6.91834924631667,9.94320831917705,6.92155644021416,4.5302876089991,7.55801366488108,7.52875043322645,7.69992931814256,7.68297486065645,6.31367307450823,4.6173398707593,5.05028044491965,7.23673610557462,6.10727790728493,6.95692773388472,7.59190521811233,5.98010494041538,19.4852250791598,7.01794825336225,11.1732948105115,1.53030665655075,1.98532277207564,0
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.111830832275,2.10658073689794,0,0,0,0.262261207256992,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,34.2299495517301,21.3095597252438,17.6931208157598,2.93971485413261,0,0,0,0,0,0,0,63.9320016316329,39.1453324661304,65.9184659646426,0.677689064138264,0,0,0,0,0.898800331555214,1.92109152660777,124.945982831716,115.0250594586,135.44927511029,0,0.220868540951614,22.5383070555515,20.1275489138296,34.9303138911808,2.20231761998777,3.70293280447044,1.99688493233117,33.1034582202787,21.0421580285542,41.6730696445408,0.837548997004143,1.12552522006336,2.44477196442896,1.17851434189467,0.427115042397309,0.559198337475902,0,0,1.15945795480671,6.88339101585109,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,1.25602267690966,1.03575153458869,0,0.867426633830679,0,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,5.09288173976397,8.23501085073528,7.413606774659,34.0695667576862,24.2929684463814,2.70124457927428,6.32740925964255,0.203678727700633,0,0,6.52369753248069,40.2072168754754,28.5078609497506,41.5943519850357,39.3339574551216,51.8438123533118,51.7579429950793,47.8815812500214,11.3829483125167,43.760302565367,27.231275544166,22.6976950171494,7.45265490253754,7.50727572909114,3.1342694986995,3.70407845534298,0,0,0,0,0.828503090142008,0.703578179943289,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,26.7068234676442,67.4025211084313,0.330418782983798,0,0.853153002140936,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,3.85388415213294,6.17326891149548,4.12773889737726,2.02375901146368,3.44862206360455,3.13530307678142,1.78238096246994,2.87696137450811,5.35046248357617,1.37280706594041,25.8782771749238,6.32639611036456,5.92871578917665,5.80931419278357,2.69096120282868,4.82443521363367,0,1.32643988239339,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,7.06906896127976,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,15.8453762747553,15.3936833701478,12.8602221018955,2.48276327099183,4.10248280484762,2.13913726782757,3.95804433848979,0.469343416127421,2.54198485036584,0,49.9605346412685,31.9699564857893,29.4930202898682,28.5299902167496,30.5302073525814,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0.276399947608848,0.954670618015114,1.42351197111511,0,0.108005340821801,0,0,0.404593039154462,0.743881101528023,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0,0.651021924219751,2.72634295506848,2.41584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,33.3203587144069,37.2863441570813,37.2382083735608,49.6655696973257,29.4585483501376,47.5898155355511,33.7511250115903,40.9792294934041,33.9856806738153,32.1011393286128,20.2385327789145,36.7102883528949,17.4148277869217,10.6966955510049,15.7209871970987,9.74370594785075,8.00088220085815,7.62329711783909,6.4183841918363,7.58091635291392,6.33698249725599,7.1678009726709,7.86588662747012,6.21043978327232,5.39893408182765,10.4784612082276,7.3007125345259,6.17309505483856,7.41754621445952,6.91834924631667,9.94320831917705,6.92155644021416,4.5302876089991,7.55801366488108,7.52875043322645,7.69992931814256,7.68297486065645,6.31367307450823,4.6173398707593,5.05028044491965,7.23673610557462,6.10727790728493,6.95692773388472,7.59190521811233,5.98010494041538,19.4852250791598,7.01794825336225,11.1732948105115,1.53030665655075,1.98532277207564,0
|short_description=p2@Lhx2
}}
}}

Latest revision as of 16:38, 26 September 2015

Short description:p2@Lhx2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lhx2_5end
Coexpression cluster:MCL_coexpression_mm9:2347
Association with transcript: -227bp_to_ENSMUST00000000253, NM_010710, uc008jnl.1_5end
EntrezGene:Lhx2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lhx2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C234.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.31
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C363.93
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C765.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5124.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5115.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9135.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D534.07
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C640.21
eyeball, embryo E14.CNhs10521.399-16E228.51
eyeball, embryo E15.CNhs10593.426-16C941.59
eyeball, embryo E17.CNhs11023.1261-18D439.33
eyeball, neonate N00.CNhs11207.633-15C651.84
eyeball, neonate N01.CNhs11140.1532-43E751.76
eyeball, neonate N02.CNhs11205.1551-44G847.88
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E243.76
forelimb, embryo E12.CNhs10600.359-14H227.23
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E826.71
hippocampus, neonate N00.CNhs11228.627-43G167.40
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E615.85
pituitary gland, embryo E13.CNhs11009.370-44C715.39
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C349.96
skin, neonate N00.CNhs11124.650-25G431.97
skin, neonate N03.CNhs11215.662-22H329.49
skin, neonate N06.CNhs11097.693-20I528.53
skin, neonate N10.CNhs11108.762-6C430.53
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D749.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I820.24
whole body, embryo E12.CNhs10587.857-27C936.71
whole body, embryo E13.CNhs10512.372-23H217.41
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I519.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.26e-0723
neuroblast (sensu Vertebrata)9.26e-0723

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.34e-2749
anterior neural tube1.27e-2040
regional part of forebrain2.32e-2039
forebrain2.32e-2039
future forebrain2.32e-2039
ecto-epithelium1.22e-1973
brain grey matter1.06e-1829
regional part of telencephalon1.06e-1829
telencephalon1.06e-1829
neurectoderm1.72e-1864
neural plate1.72e-1864
presumptive neural plate1.72e-1864
brain9.64e-1847
future brain9.64e-1847
regional part of brain2.50e-1746
ectoderm-derived structure4.63e-1795
ectoderm4.63e-1795
presumptive ectoderm4.63e-1795
cerebral cortex5.19e-1721
cerebral hemisphere5.19e-1721
pallium5.19e-1721
regional part of nervous system2.54e-1554
gray matter6.19e-1534
neural tube3.33e-1452
neural rod3.33e-1452
future spinal cord3.33e-1452
neural keel3.33e-1452
regional part of cerebral cortex1.88e-1317
central nervous system5.83e-1273
nervous system3.39e-1175
occipital lobe6.42e-0910
visual cortex6.42e-0910
neocortex6.42e-0910
eye8.74e-089
camera-type eye8.74e-089
simple eye8.74e-089
immature eye8.74e-089
ocular region8.74e-089
visual system8.74e-089
face8.74e-089
optic cup8.74e-089
optic vesicle8.74e-089
eye primordium8.74e-089
structure with developmental contribution from neural crest1.45e-0792
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