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FFCP PHASE1:Mm9::chr7:36539404..36539411,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=233115
|EntrezGene=233115
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=6bp_to_ENSMUST00000155993_5end
|association_with_transcript=6bp_to_ENSMUST00000155993_5end
|cluster_id=chr7:36539404..36539411,-
|description=CAGE_peak_4_at_Dpy19l3_5end
|description=CAGE_peak_4_at_Dpy19l3_5end
|id=chr7:36539404..36539411,-
|id=chr7:36539404..36539411,-
|ontology_enrichment_celltype=CL:0000117!2.39e-07!23;CL:0000337!2.39e-07!23;CL:0000540!2.63e-07!33;CL:0000047!2.63e-07!33;CL:0000031!2.63e-07!33;CL:0000404!2.63e-07!33;CL:0000221!3.90e-07!44;CL:0000133!3.90e-07!44;CL:0002319!5.80e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-09,33;CL:0000047,1.84e-09,33;CL:0000031,1.84e-09,33;CL:0000404,1.84e-09,33;CL:0000117,6.95e-09,23;CL:0000337,6.95e-09,23;CL:0002319,2.92e-08,43;CL:0000221,5.73e-08,44;CL:0000133,5.73e-08,44;CL:0000393,2.31e-07,39;CL:0000211,2.31e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.33e-15!94;UBERON:0002346!6.72e-15!71;UBERON:0003075!6.72e-15!71;UBERON:0007284!6.72e-15!71;UBERON:0001049!1.58e-14!52;UBERON:0005068!1.58e-14!52;UBERON:0006241!1.58e-14!52;UBERON:0007135!1.58e-14!52;UBERON:0001017!1.69e-14!73;UBERON:0005743!1.69e-14!73;UBERON:0000073!1.72e-14!75;UBERON:0001016!1.72e-14!75;UBERON:0007811!2.11e-14!86;UBERON:0003080!2.72e-14!40;UBERON:0002780!2.95e-14!39;UBERON:0001890!2.95e-14!39;UBERON:0006240!2.95e-14!39;UBERON:0003056!5.09e-14!49;UBERON:0004121!8.15e-14!102;UBERON:0000924!8.15e-14!102;UBERON:0006601!8.15e-14!102;UBERON:0000033!1.25e-13!63;UBERON:0002020!1.47e-13!34;UBERON:0002616!5.60e-13!49;UBERON:0000955!1.06e-12!50;UBERON:0006238!1.06e-12!50;UBERON:0002791!4.76e-12!29;UBERON:0003528!4.76e-12!29;UBERON:0001893!4.76e-12!29;UBERON:0000956!8.90e-09!21;UBERON:0001869!8.90e-09!21;UBERON:0000203!8.90e-09!21;UBERON:0000477!2.92e-07!154;UBERON:0004111!4.71e-07!122;UBERON:0000475!5.99e-07!200;UBERON:0000025!6.83e-07!114;UBERON:0002619!7.13e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.36e-18,29;UBERON:0002791,1.36e-18,29;UBERON:0001893,1.36e-18,29;UBERON:0002780,1.94e-18,39;UBERON:0001890,1.94e-18,39;UBERON:0006240,1.94e-18,39;UBERON:0002020,2.33e-18,34;UBERON:0003080,8.38e-18,40;UBERON:0001016,2.31e-17,75;UBERON:0001017,7.02e-17,73;UBERON:0003056,4.98e-16,49;UBERON:0004121,7.42e-16,95;UBERON:0000924,7.42e-16,95;UBERON:0006601,7.42e-16,95;UBERON:0000073,3.17e-15,54;UBERON:0002346,6.07e-15,64;UBERON:0003075,6.07e-15,64;UBERON:0007284,6.07e-15,64;UBERON:0001049,1.35e-14,52;UBERON:0005068,1.35e-14,52;UBERON:0006241,1.35e-14,52;UBERON:0007135,1.35e-14,52;UBERON:0002616,1.38e-14,46;UBERON:0000955,3.94e-14,47;UBERON:0006238,3.94e-14,47;UBERON:0000956,3.04e-13,21;UBERON:0001869,3.04e-13,21;UBERON:0000203,3.04e-13,21;UBERON:0010371,4.20e-13,73;UBERON:0002021,3.77e-10,10;UBERON:0000411,3.77e-10,10;UBERON:0001950,3.77e-10,10;UBERON:0002619,3.95e-10,17;UBERON:0010314,1.27e-09,92
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0.34243593645101,0.239316476986009,0.171200729931206,0.524522414513984,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0.872100625521786,0.659058548203415,0.58328969722285,1.39986421625363,0,1.00669563634642,0,0.336093799142464,0.257259436035947,0,0,1.01158230429799,0,1.90149421051854,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,2.38486108309499,1.4850653216486,1.68259969081106,0.856952953211411,0.662605622854841,0.734944795289724,1.43768206527355,0.919218786610021,0,1.53224805702225,0.614426133024974,0.923204014111357,1.46380229763855,1.04182674111352,1.11673199600552,1.68828783009504,0.45839474333043,1.17851434189467,1.13897344639282,0.745597783301202,0.151452386666368,1.13357340160178,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.280888840263504,0.852151612890289,0.259786004602869,0.70667914902068,0.704217098883403,1.28326477414318,0,0,0,0,0,0.11418387971906,2.07150306917737,0.742210695324124,0,1.52232739156071,0.691846491768175,0.60289056221049,0.823120949949934,0.125666591329675,1.23597483867187,0,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,1.07833612055328,0,0.254140454146129,0.599162557619291,1.37250180845588,1.50785222535437,0.695297280769106,1.27857728665165,1.0389402227978,1.78465389374533,0.81471491080253,0.373220911830279,0.505445516867349,0.210441855886474,1.17108398666433,0.459804208866946,1.26043490863744,0.60281927134286,0.544291993210623,0.512454881139399,0.374806898238915,0.258703370739016,0.862271971731369,0.756424320671277,0.703804496655795,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,1.02939162845886,0.284163499395593,0.207125772535502,0,0.180062061461015,0.946978942340841,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,4.20579897128254,1.13195073617213,0,0,1.06644125267617,0.464473343720877,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.814605311381257,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,1.00107063429656,0,0.224862112384854,0,0,0.763877555344259,0.863088412352432,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.184753190166605,0.568474235311454,0.651859905768103,0.339490171550376,0.938760993154008,0.502518772325447,0.714130922658041,0.195133647857799,0.945810864637146,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0.481651769963376,0.35163505977661,0.819674726883377,0.252470927204373,0,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.566153061577665,1.21443210502468,0.584511715822624,0,0.321321316421807,0.567760340833074,0.712262414669021,0.162886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0.680879211507576,1.08036656418786,1.16422815404479,0.428674070063185,0.886701168211368,0.535106452806212,0.658196082408484,0.608929898229199,0,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.482503399425247,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,1.18984900995699,1.6794174278839,1.65839968565309,0,0.790839983952838,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0,1.24267862617385,0,1.19613236835183,0.330916980914195,1.75006069509643,0.387479470433193,0.844780627453891,0.704143431874524,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,1.89606672376907,1.82452693761148,0.821687657318618,0.649604114888975,0.537080087002444,0.993406773906324,0.360586348559907,0.590758108698309,0.807731599585181,0.457240839929999,0.604957110821043,0.877120926657772,0.481059208201647,1.63627663054197,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,2.25900737046827,0.460325236507177,1.14579102687879,2.57779773515531,1.37016503954128,0,1.35004500046361,3.60256962579376,1.35942722695261,2.07104124700728,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.689225627467359,0,0.579421629724277,0.192909220463705,0.412085900803307,0.883193520806384,0,0.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|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0.34243593645101,0.239316476986009,0.171200729931206,0.524522414513984,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0.872100625521786,0.659058548203415,0.58328969722285,1.39986421625363,0,1.00669563634642,0,0.336093799142464,0.257259436035947,0,0,1.01158230429799,0,1.90149421051854,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,2.38486108309499,1.4850653216486,1.68259969081106,0.856952953211411,0.662605622854841,0.734944795289724,1.43768206527355,0.919218786610021,0,1.53224805702225,0.614426133024974,0.923204014111357,1.46380229763855,1.04182674111352,1.11673199600552,1.68828783009504,0.45839474333043,1.17851434189467,1.13897344639282,0.745597783301202,0.151452386666368,1.13357340160178,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.280888840263504,0.852151612890289,0.259786004602869,0.70667914902068,0.704217098883403,1.28326477414318,0,0,0,0,0,0.11418387971906,2.07150306917737,0.742210695324124,0,1.52232739156071,0.691846491768175,0.60289056221049,0.823120949949934,0.125666591329675,1.23597483867187,0,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,1.07833612055328,0,0.254140454146129,0.599162557619291,1.37250180845588,1.50785222535437,0.695297280769106,1.27857728665165,1.0389402227978,1.78465389374533,0.81471491080253,0.373220911830279,0.505445516867349,0.210441855886474,1.17108398666433,0.459804208866946,1.26043490863744,0.60281927134286,0.544291993210623,0.512454881139399,0.374806898238915,0.258703370739016,0.862271971731369,0.756424320671277,0.703804496655795,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,1.02939162845886,0.284163499395593,0.207125772535502,0,0.180062061461015,0.946978942340841,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,4.20579897128254,1.13195073617213,0,0,1.06644125267617,0.464473343720877,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.814605311381257,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,1.00107063429656,0,0.224862112384854,0,0,0.763877555344259,0.863088412352432,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.184753190166605,0.568474235311454,0.651859905768103,0.339490171550376,0.938760993154008,0.502518772325447,0.714130922658041,0.195133647857799,0.945810864637146,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0.481651769963376,0.35163505977661,0.819674726883377,0.252470927204373,0,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.566153061577665,1.21443210502468,0.584511715822624,0,0.321321316421807,0.567760340833074,0.712262414669021,0.162886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0.680879211507576,1.08036656418786,1.16422815404479,0.428674070063185,0.886701168211368,0.535106452806212,0.658196082408484,0.608929898229199,0,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.482503399425247,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,1.18984900995699,1.6794174278839,1.65839968565309,0,0.790839983952838,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0,1.24267862617385,0,1.19613236835183,0.330916980914195,1.75006069509643,0.387479470433193,0.844780627453891,0.704143431874524,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,1.89606672376907,1.82452693761148,0.821687657318618,0.649604114888975,0.537080087002444,0.993406773906324,0.360586348559907,0.590758108698309,0.807731599585181,0.457240839929999,0.604957110821043,0.877120926657772,0.481059208201647,1.63627663054197,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,2.25900737046827,0.460325236507177,1.14579102687879,2.57779773515531,1.37016503954128,0,1.35004500046361,3.60256962579376,1.35942722695261,2.07104124700728,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.689225627467359,0,0.579421629724277,0.192909220463705,0.412085900803307,0.883193520806384,0,0.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|short_description=p4@Dpy19l3
|short_description=p4@Dpy19l3
}}
}}

Latest revision as of 16:58, 26 September 2015

Short description:p4@Dpy19l3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dpy19l3_5end
Coexpression cluster:NA
Association with transcript: 6bp_to_ENSMUST00000155993_5end
EntrezGene:Dpy19l3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Dpy19l3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.84e-0933
neuronal stem cell1.84e-0933
neuroblast1.84e-0933
electrically signaling cell1.84e-0933
CNS neuron (sensu Vertebrata)6.95e-0923
neuroblast (sensu Vertebrata)6.95e-0923
neural cell2.92e-0843
ectodermal cell5.73e-0844
neurectodermal cell5.73e-0844
electrically responsive cell2.31e-0739
electrically active cell2.31e-0739

Uber anatomy
Ontology termp-valuen
brain grey matter1.36e-1829
regional part of telencephalon1.36e-1829
telencephalon1.36e-1829
regional part of forebrain1.94e-1839
forebrain1.94e-1839
future forebrain1.94e-1839
gray matter2.33e-1834
anterior neural tube8.38e-1840
nervous system2.31e-1775
central nervous system7.02e-1773
pre-chordal neural plate4.98e-1649
ectoderm-derived structure7.42e-1695
ectoderm7.42e-1695
presumptive ectoderm7.42e-1695
regional part of nervous system3.17e-1554
neurectoderm6.07e-1564
neural plate6.07e-1564
presumptive neural plate6.07e-1564
neural tube1.35e-1452
neural rod1.35e-1452
future spinal cord1.35e-1452
neural keel1.35e-1452
regional part of brain1.38e-1446
brain3.94e-1447
future brain3.94e-1447
cerebral cortex3.04e-1321
cerebral hemisphere3.04e-1321
pallium3.04e-1321
ecto-epithelium4.20e-1373
occipital lobe3.77e-1010
visual cortex3.77e-1010
neocortex3.77e-1010
regional part of cerebral cortex3.95e-1017
structure with developmental contribution from neural crest1.27e-0992
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