FFCP PHASE1:Mm9::chr11:100943957..100943992,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:100943957..100943992,+ to FFCP PHASE1:Mm9::chr11:100943957..100943992,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71743 | |EntrezGene=71743 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9DBL7 | |UniProt=Q9DBL7 | ||
|association_with_transcript=18bp_to_ENSMUST00000107308,NM_027896,uc007lnd.1_5end | |||
|cluster_id=chr11:100943957..100943992,+ | |||
|description=CAGE_peak_2_at_Coasy_5end | |||
|id=chr11:100943957..100943992,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.87e-13!63;UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002346!1.39e-11!71;UBERON:0003075!1.39e-11!71;UBERON:0007284!1.39e-11!71;UBERON:0002616!1.71e-11!49;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0001017!2.37e-11!73;UBERON:0005743!2.37e-11!73;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000475!9.74e-10!200;UBERON:0003056!1.13e-09!49;UBERON:0007811!2.76e-09!86;UBERON:0000479!8.68e-09!349;UBERON:0003080!8.99e-09!40;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0004111!1.23e-07!122;UBERON:0000153!1.28e-07!94;UBERON:0002020!3.22e-07!34;UBERON:0000025!7.84e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.82e-12,54;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001049,1.77e-11,52;UBERON:0005068,1.77e-11,52;UBERON:0006241,1.77e-11,52;UBERON:0007135,1.77e-11,52;UBERON:0001017,2.37e-11,73;UBERON:0001016,4.54e-11,75;UBERON:0000955,7.51e-11,47;UBERON:0006238,7.51e-11,47;UBERON:0002616,1.32e-10,46;UBERON:0002346,1.56e-10,64;UBERON:0003075,1.56e-10,64;UBERON:0007284,1.56e-10,64;UBERON:0010371,9.16e-10,73;UBERON:0003056,1.13e-09,49;UBERON:0000479,8.68e-09,349;UBERON:0003080,8.99e-09,40;UBERON:0002780,2.10e-08,39;UBERON:0001890,2.10e-08,39;UBERON:0006240,2.10e-08,39;UBERON:0004111,1.23e-07,122;UBERON:0002020,3.22e-07,34;UBERON:0000025,7.84e-07,114 | |||
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| ||
|short_description=p2@Coasy | |||
}} | }} |
Latest revision as of 17:07, 26 September 2015
Short description: | p2@Coasy |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Coasy_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENSMUST00000107308, NM_027896, uc007lnd.1_5end |
EntrezGene: | Coasy |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.82e-12 | 54 |
ectoderm-derived structure | 1.75e-11 | 95 |
ectoderm | 1.75e-11 | 95 |
presumptive ectoderm | 1.75e-11 | 95 |
neural tube | 1.77e-11 | 52 |
neural rod | 1.77e-11 | 52 |
future spinal cord | 1.77e-11 | 52 |
neural keel | 1.77e-11 | 52 |
central nervous system | 2.37e-11 | 73 |
nervous system | 4.54e-11 | 75 |
brain | 7.51e-11 | 47 |
future brain | 7.51e-11 | 47 |
regional part of brain | 1.32e-10 | 46 |
neurectoderm | 1.56e-10 | 64 |
neural plate | 1.56e-10 | 64 |
presumptive neural plate | 1.56e-10 | 64 |
ecto-epithelium | 9.16e-10 | 73 |
pre-chordal neural plate | 1.13e-09 | 49 |
tissue | 8.68e-09 | 349 |
anterior neural tube | 8.99e-09 | 40 |
regional part of forebrain | 2.10e-08 | 39 |
forebrain | 2.10e-08 | 39 |
future forebrain | 2.10e-08 | 39 |
anatomical conduit | 1.23e-07 | 122 |
gray matter | 3.22e-07 | 34 |
tube | 7.84e-07 | 114 |