FFCP PHASE1:Mm9::chr11:101017282..101017354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103768 | |EntrezGene=103768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_uc007lnn.1_5end | |association_with_transcript=48bp_to_uc007lnn.1_5end | ||
|cluster_id=chr11:101017282..101017354,+ | |||
|description=CAGE_peak_1_at_Tubg2_5end | |description=CAGE_peak_1_at_Tubg2_5end | ||
|id=chr11:101017282..101017354,+ | |id=chr11:101017282..101017354,+ | ||
|ontology_enrichment_celltype=CL:0000393!4.43e-15!39;CL:0000211!4.43e-15!39;CL:0000540!1.57e-14!33;CL:0000047!1.57e-14!33;CL:0000031!1.57e-14!33;CL:0000404!1.57e-14!33;CL:0000117!2.97e-13!23;CL:0000337!2.97e-13!23;CL:0000055!1.44e-12!50;CL:0002319!3.68e-12!43;CL:0000221!4.23e-12!44;CL:0000133!4.23e-12!44 | |ontology_enrichment_celltype=CL:0000393!4.43e-15!39;CL:0000211!4.43e-15!39;CL:0000540!1.57e-14!33;CL:0000047!1.57e-14!33;CL:0000031!1.57e-14!33;CL:0000404!1.57e-14!33;CL:0000117!2.97e-13!23;CL:0000337!2.97e-13!23;CL:0000055!1.44e-12!50;CL:0002319!3.68e-12!43;CL:0000221!4.23e-12!44;CL:0000133!4.23e-12!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.06e-16,39;CL:0000211,9.06e-16,39;CL:0000540,3.43e-15,33;CL:0000047,3.43e-15,33;CL:0000031,3.43e-15,33;CL:0000404,3.43e-15,33;CL:0000117,7.53e-14,23;CL:0000337,7.53e-14,23;CL:0002319,1.02e-12,43;CL:0000221,1.18e-12,44;CL:0000133,1.18e-12,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-30!73;UBERON:0005743!2.55e-30!73;UBERON:0000073!3.78e-29!75;UBERON:0001016!3.78e-29!75;UBERON:0002346!2.08e-28!71;UBERON:0003075!2.08e-28!71;UBERON:0007284!2.08e-28!71;UBERON:0004121!1.50e-27!102;UBERON:0000924!1.50e-27!102;UBERON:0006601!1.50e-27!102;UBERON:0000033!3.12e-25!63;UBERON:0001049!3.14e-25!52;UBERON:0005068!3.14e-25!52;UBERON:0006241!3.14e-25!52;UBERON:0007135!3.14e-25!52;UBERON:0000955!4.28e-24!50;UBERON:0006238!4.28e-24!50;UBERON:0002616!2.06e-23!49;UBERON:0003056!1.95e-22!49;UBERON:0003080!3.29e-20!40;UBERON:0002780!1.83e-19!39;UBERON:0001890!1.83e-19!39;UBERON:0006240!1.83e-19!39;UBERON:0002020!2.14e-18!34;UBERON:0002791!1.37e-15!29;UBERON:0003528!1.37e-15!29;UBERON:0001893!1.37e-15!29;UBERON:0000153!1.70e-12!94;UBERON:0007811!2.20e-12!86;UBERON:0000956!8.90e-11!21;UBERON:0001869!8.90e-11!21;UBERON:0000203!8.90e-11!21;UBERON:0002619!3.25e-09!17;UBERON:0000468!1.37e-07!333;UBERON:0002021!1.70e-07!10;UBERON:0000411!1.70e-07!10;UBERON:0001950!1.70e-07!10;UBERON:0000025!6.81e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!2.55e-30!73;UBERON:0005743!2.55e-30!73;UBERON:0000073!3.78e-29!75;UBERON:0001016!3.78e-29!75;UBERON:0002346!2.08e-28!71;UBERON:0003075!2.08e-28!71;UBERON:0007284!2.08e-28!71;UBERON:0004121!1.50e-27!102;UBERON:0000924!1.50e-27!102;UBERON:0006601!1.50e-27!102;UBERON:0000033!3.12e-25!63;UBERON:0001049!3.14e-25!52;UBERON:0005068!3.14e-25!52;UBERON:0006241!3.14e-25!52;UBERON:0007135!3.14e-25!52;UBERON:0000955!4.28e-24!50;UBERON:0006238!4.28e-24!50;UBERON:0002616!2.06e-23!49;UBERON:0003056!1.95e-22!49;UBERON:0003080!3.29e-20!40;UBERON:0002780!1.83e-19!39;UBERON:0001890!1.83e-19!39;UBERON:0006240!1.83e-19!39;UBERON:0002020!2.14e-18!34;UBERON:0002791!1.37e-15!29;UBERON:0003528!1.37e-15!29;UBERON:0001893!1.37e-15!29;UBERON:0000153!1.70e-12!94;UBERON:0007811!2.20e-12!86;UBERON:0000956!8.90e-11!21;UBERON:0001869!8.90e-11!21;UBERON:0000203!8.90e-11!21;UBERON:0002619!3.25e-09!17;UBERON:0000468!1.37e-07!333;UBERON:0002021!1.70e-07!10;UBERON:0000411!1.70e-07!10;UBERON:0001950!1.70e-07!10;UBERON:0000025!6.81e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-32,73;UBERON:0001016,1.39e-30,75;UBERON:0002346,6.24e-30,64;UBERON:0003075,6.24e-30,64;UBERON:0007284,6.24e-30,64;UBERON:0004121,6.84e-28,95;UBERON:0000924,6.84e-28,95;UBERON:0006601,6.84e-28,95;UBERON:0000073,9.65e-28,54;UBERON:0001049,1.94e-26,52;UBERON:0005068,1.94e-26,52;UBERON:0006241,1.94e-26,52;UBERON:0007135,1.94e-26,52;UBERON:0010371,1.94e-26,73;UBERON:0010314,1.47e-25,92;UBERON:0003056,1.68e-23,49;UBERON:0000955,2.54e-23,47;UBERON:0006238,2.54e-23,47;UBERON:0002616,1.28e-22,46;UBERON:0003080,3.68e-21,40;UBERON:0002780,2.24e-20,39;UBERON:0001890,2.24e-20,39;UBERON:0006240,2.24e-20,39;UBERON:0002020,2.96e-19,34;UBERON:0003528,2.64e-16,29;UBERON:0002791,2.64e-16,29;UBERON:0001893,2.64e-16,29;UBERON:0000956,3.02e-11,21;UBERON:0001869,3.02e-11,21;UBERON:0000203,3.02e-11,21;UBERON:0002619,1.32e-09,17;UBERON:0002021,8.44e-08,10;UBERON:0000411,8.44e-08,10;UBERON:0001950,8.44e-08,10 | |||
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| ||
|short_description=p1@Tubg2 | |short_description=p1@Tubg2 | ||
}} | }} |
Latest revision as of 17:11, 26 September 2015
Short description: | p1@Tubg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 48bp_to_uc007lnn.1_5end |
EntrezGene: | Tubg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.06e-16 | 39 |
electrically active cell | 9.06e-16 | 39 |
neuron | 3.43e-15 | 33 |
neuronal stem cell | 3.43e-15 | 33 |
neuroblast | 3.43e-15 | 33 |
electrically signaling cell | 3.43e-15 | 33 |
CNS neuron (sensu Vertebrata) | 7.53e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.53e-14 | 23 |
neural cell | 1.02e-12 | 43 |
ectodermal cell | 1.18e-12 | 44 |
neurectodermal cell | 1.18e-12 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.11e-32 | 73 |
nervous system | 1.39e-30 | 75 |
neurectoderm | 6.24e-30 | 64 |
neural plate | 6.24e-30 | 64 |
presumptive neural plate | 6.24e-30 | 64 |
ectoderm-derived structure | 6.84e-28 | 95 |
ectoderm | 6.84e-28 | 95 |
presumptive ectoderm | 6.84e-28 | 95 |
regional part of nervous system | 9.65e-28 | 54 |
neural tube | 1.94e-26 | 52 |
neural rod | 1.94e-26 | 52 |
future spinal cord | 1.94e-26 | 52 |
neural keel | 1.94e-26 | 52 |
ecto-epithelium | 1.94e-26 | 73 |
structure with developmental contribution from neural crest | 1.47e-25 | 92 |
pre-chordal neural plate | 1.68e-23 | 49 |
brain | 2.54e-23 | 47 |
future brain | 2.54e-23 | 47 |
regional part of brain | 1.28e-22 | 46 |
anterior neural tube | 3.68e-21 | 40 |
regional part of forebrain | 2.24e-20 | 39 |
forebrain | 2.24e-20 | 39 |
future forebrain | 2.24e-20 | 39 |
gray matter | 2.96e-19 | 34 |
brain grey matter | 2.64e-16 | 29 |
regional part of telencephalon | 2.64e-16 | 29 |
telencephalon | 2.64e-16 | 29 |
cerebral cortex | 3.02e-11 | 21 |
cerebral hemisphere | 3.02e-11 | 21 |
pallium | 3.02e-11 | 21 |
regional part of cerebral cortex | 1.32e-09 | 17 |
occipital lobe | 8.44e-08 | 10 |
visual cortex | 8.44e-08 | 10 |
neocortex | 8.44e-08 | 10 |