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FFCP PHASE1:Mm9::chr9:44925896..44925959,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72821
|EntrezGene=72821
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q56A07,Q1MXF8
|UniProt=Q56A07,Q1MXF8
|association_with_transcript=0bp_to_ENSMUST00000170998,NM_001014761,uc009pfg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000170998,NM_001014761,uc009pfg.1_5end
|cluster_id=chr9:44925896..44925959,+
|description=CAGE_peak_1_at_Scn2b_5end
|description=CAGE_peak_1_at_Scn2b_5end
|id=chr9:44925896..44925959,+
|id=chr9:44925896..44925959,+
|ontology_enrichment_celltype=CL:0000117!1.19e-11!23;CL:0000337!1.19e-11!23;CL:0000540!1.07e-08!33;CL:0000047!1.07e-08!33;CL:0000031!1.07e-08!33;CL:0000404!1.07e-08!33;CL:0000221!3.34e-07!44;CL:0000133!3.34e-07!44;CL:0002319!3.62e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-12,23;CL:0000337,3.71e-12,23;CL:0000540,2.71e-08,33;CL:0000047,2.71e-08,33;CL:0000031,2.71e-08,33;CL:0000404,2.71e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.48e-25!52;UBERON:0005068!1.48e-25!52;UBERON:0006241!1.48e-25!52;UBERON:0007135!1.48e-25!52;UBERON:0002346!1.90e-25!71;UBERON:0003075!1.90e-25!71;UBERON:0007284!1.90e-25!71;UBERON:0001017!2.48e-25!73;UBERON:0005743!2.48e-25!73;UBERON:0000033!3.29e-25!63;UBERON:0000955!6.73e-25!50;UBERON:0006238!6.73e-25!50;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0002616!2.80e-24!49;UBERON:0004121!2.35e-21!102;UBERON:0000924!2.35e-21!102;UBERON:0006601!2.35e-21!102;UBERON:0003056!4.35e-21!49;UBERON:0003080!4.11e-20!40;UBERON:0002780!1.81e-19!39;UBERON:0001890!1.81e-19!39;UBERON:0006240!1.81e-19!39;UBERON:0002020!5.35e-17!34;UBERON:0000153!1.45e-14!94;UBERON:0002791!2.63e-14!29;UBERON:0003528!2.63e-14!29;UBERON:0001893!2.63e-14!29;UBERON:0007811!1.63e-12!86;UBERON:0000956!5.19e-10!21;UBERON:0001869!5.19e-10!21;UBERON:0000203!5.19e-10!21;UBERON:0002619!4.48e-09!17;UBERON:0002021!6.44e-08!10;UBERON:0000411!6.44e-08!10;UBERON:0001950!6.44e-08!10;UBERON:0000468!7.14e-08!333;UBERON:0000025!3.16e-07!114;UBERON:0004111!5.81e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.53e-28,54;UBERON:0002346,1.95e-26,64;UBERON:0003075,1.95e-26,64;UBERON:0007284,1.95e-26,64;UBERON:0001049,2.75e-26,52;UBERON:0005068,2.75e-26,52;UBERON:0006241,2.75e-26,52;UBERON:0007135,2.75e-26,52;UBERON:0001017,4.03e-25,73;UBERON:0001016,2.03e-24,75;UBERON:0000955,3.32e-23,47;UBERON:0006238,3.32e-23,47;UBERON:0002616,1.43e-22,46;UBERON:0003056,4.50e-22,49;UBERON:0003080,4.76e-21,40;UBERON:0010371,5.18e-21,73;UBERON:0002780,2.27e-20,39;UBERON:0001890,2.27e-20,39;UBERON:0006240,2.27e-20,39;UBERON:0004121,4.21e-20,95;UBERON:0000924,4.21e-20,95;UBERON:0006601,4.21e-20,95;UBERON:0010314,1.03e-18,92;UBERON:0002020,8.92e-18,34;UBERON:0003528,5.99e-15,29;UBERON:0002791,5.99e-15,29;UBERON:0001893,5.99e-15,29;UBERON:0000956,1.95e-10,21;UBERON:0001869,1.95e-10,21;UBERON:0000203,1.95e-10,21;UBERON:0002619,1.87e-09,17;UBERON:0002021,3.07e-08,10;UBERON:0000411,3.07e-08,10;UBERON:0001950,3.07e-08,10
|phase1_expression=5.2849119544582,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1930953080443,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,3.29529274101708,2.52758868796568,1.39986421625363,1.43752564364972,0,0,0,0,2.57880095944881,0,11.3297218081375,25.3915670050576,10.1413024560989,0.677689064138264,1.77858959222228,0,0,0,1.19840044207362,2.30530983192933,4.76972216618997,7.69533848490637,4.6271491497304,56.8445458963569,62.5057970893066,7.96190194897201,6.42164655822184,9.19218786610021,350.168501578056,360.078293400229,377.257645677334,15.2988093767025,16.1933129176265,10.4182674111352,290.629501960438,232.983720553115,227.822187435224,31.8198872311561,40.148813985347,13.6071595452469,1.36307147999731,1.36028808192214,0.289864488701678,0,0,0,0,0,11.3759980306719,0,0,0,3.38024207464033,0,0,0,0,0,0,7.4219521817389,0,4.89859058913922,4.8575891494518,3.04465478312141,4.38169444786511,3.76806601381556,2.11659672844269,2.26199864393416,0,1.59059292611903,0,2.58826959915855,0.441683036920787,1.45462575940567,0,337.283478157302,222.851296049516,1.27728527604296,0,0,0,221.240774400923,206.332771871201,10.8062742817063,263.691493731683,186.672283851141,277.189251442453,226.651044505657,3.1570202793598,2.98576729464223,8.59257378674494,7.57590681191306,5.98554037628437,3.44853156650209,5.58192602396583,5.27466862425003,2.65342346690179,4.22775276940004,3.27956035959051,25.8703370739016,10.5628316537093,9.64441008855878,12.4925298156404,10.302199424096,9.73165372289593,9.05455632957633,5.96768195583036,6.17006227137329,0,0,0,3.10688658803253,3.28336483973535,2.52086886045421,4.7348947117042,2.55793501271625,1.85120535464854,1.16266972375204,2.14618721119695,0.116765342367169,0.987359099480883,0.492502392237286,0.243206428637567,0.438599962275997,1.09775057645525,0.268412837520744,231.529233369104,7.51203670368776,0,1.58670339998127,8.95810652247983,6.96710015581316,5.41243337552792,3.02525286935014,2.89091456998331,2.47293313946327,1.89811624617805,1.31759163779209,3.01602250560323,1.59165177632921,1.55971269695296,0,0.648414149624083,0.796565093017469,7.96605184002943,4.56994050438915,6.76246414038483,4.48032921259691,5.04276466635827,1.1221731182451,2.40298841072178,0.442830443938806,0.156998727841375,0.493588655687202,0.296452627087149,2.50267658574141,1.37591296579242,0.674586337154561,1.01430060694251,0.482354319504834,0.25462585178142,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,6.44270800019648,6.51859905768104,7.63852885988347,4.92849521405854,2.68010011906905,1.42826184531608,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,161.995545297682,156.94644834696,0,0,1.89304931649754,1.95219372148319,1.29254038639679,0.238968797952552,0.445597348164788,0.849229592366497,2.02405350837447,3.50707029493574,2.37172666767914,90.6126112309496,1.98716119291576,9.97167380536629,1.79175655288934,8.74341651754438,0,6.31229654002952,5.74414758233027,2.64047111658257,2.06711325016541,2.15204603560749,0.775284879504663,1.09060118843252,2.13898427030833,1.58018378967908,0,0,24.5116516142727,11.3438489239725,13.4533031134065,11.1455258216428,15.7832807941623,13.5560301377574,15.7967059778036,9.74287837166718,0.23467170806371,0,2.20528398054962,0.16488625294148,0,1.08563264870681,0.238744688006273,0.164140899745061,1.7488850197791,107.732100468106,0.170870880797853,5.15967169908056,1.11116716421827,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,6.32671987162271,5.08298667817122,4.53622431451565,3.76358932826044,3.27543845619266,2.56242258131159,1.65306911450672,1.04702376793612,1.03691978633434,1.86401793926078,0,5.23307911153926,3.97100377097034,4.86127970860119,4.77891346867605,5.57555214119568,1.87771581833206,2.47388331203505,0.734015410979976,0.241584120826006,0,0,4.25722952109345,4.62199307241723,1.94881234466693,1.9692936523423,1.19208812868759,0.360586348559907,0.295379054349154,0.403865799792591,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,1.9318959403219,3.00291960721891,7.3260649706906,2.78678892802786,0,181.285341480078,198.8605021711,219.991877160728,329.614403735193,339.800929806239,367.121434131394,290.259675099676,378.720131911569,384.71790522759,307.549625180581,5.81209146471389,11.5717213286299,5.63420898988643,6.07766792670735,5.8691685535835,4.41224420280034,6.22290837844523,6.18105171716683,7.70206103020357,4.54854981174835,4.56262739802432,5.65879024158229,4.49479235855436,6.08238947846258,4.47996657853783,7.1444053692461,4.51948871184936,4.82273051159263,2.88460130562315,5.5935589651071,4.80016953339582,5.14679837862079,6.91464950847231,5.0871245821315,5.45834406408918,3.9768865709088,4.93905526756486,6.05060336307039,6.3827933507555,6.17256498823512,3.6776855618494,3.25064791839359,4.50154147486658,5.88759996506671,5.40138510747196,6.24526444844865,6.55008503647143,3.00819475667618,2.29545998482612,4.19123696327079,5.10109238364927
|phase1_expression=5.2849119544582,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1930953080443,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,3.29529274101708,2.52758868796568,1.39986421625363,1.43752564364972,0,0,0,0,2.57880095944881,0,11.3297218081375,25.3915670050576,10.1413024560989,0.677689064138264,1.77858959222228,0,0,0,1.19840044207362,2.30530983192933,4.76972216618997,7.69533848490637,4.6271491497304,56.8445458963569,62.5057970893066,7.96190194897201,6.42164655822184,9.19218786610021,350.168501578056,360.078293400229,377.257645677334,15.2988093767025,16.1933129176265,10.4182674111352,290.629501960438,232.983720553115,227.822187435224,31.8198872311561,40.148813985347,13.6071595452469,1.36307147999731,1.36028808192214,0.289864488701678,0,0,0,0,0,11.3759980306719,0,0,0,3.38024207464033,0,0,0,0,0,0,7.4219521817389,0,4.89859058913922,4.8575891494518,3.04465478312141,4.38169444786511,3.76806601381556,2.11659672844269,2.26199864393416,0,1.59059292611903,0,2.58826959915855,0.441683036920787,1.45462575940567,0,337.283478157302,222.851296049516,1.27728527604296,0,0,0,221.240774400923,206.332771871201,10.8062742817063,263.691493731683,186.672283851141,277.189251442453,226.651044505657,3.1570202793598,2.98576729464223,8.59257378674494,7.57590681191306,5.98554037628437,3.44853156650209,5.58192602396583,5.27466862425003,2.65342346690179,4.22775276940004,3.27956035959051,25.8703370739016,10.5628316537093,9.64441008855878,12.4925298156404,10.302199424096,9.73165372289593,9.05455632957633,5.96768195583036,6.17006227137329,0,0,0,3.10688658803253,3.28336483973535,2.52086886045421,4.7348947117042,2.55793501271625,1.85120535464854,1.16266972375204,2.14618721119695,0.116765342367169,0.987359099480883,0.492502392237286,0.243206428637567,0.438599962275997,1.09775057645525,0.268412837520744,231.529233369104,7.51203670368776,0,1.58670339998127,8.95810652247983,6.96710015581316,5.41243337552792,3.02525286935014,2.89091456998331,2.47293313946327,1.89811624617805,1.31759163779209,3.01602250560323,1.59165177632921,1.55971269695296,0,0.648414149624083,0.796565093017469,7.96605184002943,4.56994050438915,6.76246414038483,4.48032921259691,5.04276466635827,1.1221731182451,2.40298841072178,0.442830443938806,0.156998727841375,0.493588655687202,0.296452627087149,2.50267658574141,1.37591296579242,0.674586337154561,1.01430060694251,0.482354319504834,0.25462585178142,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,6.44270800019648,6.51859905768104,7.63852885988347,4.92849521405854,2.68010011906905,1.42826184531608,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,161.995545297682,156.94644834696,0,0,1.89304931649754,1.95219372148319,1.29254038639679,0.238968797952552,0.445597348164788,0.849229592366497,2.02405350837447,3.50707029493574,2.37172666767914,90.6126112309496,1.98716119291576,9.97167380536629,1.79175655288934,8.74341651754438,0,6.31229654002952,5.74414758233027,2.64047111658257,2.06711325016541,2.15204603560749,0.775284879504663,1.09060118843252,2.13898427030833,1.58018378967908,0,0,24.5116516142727,11.3438489239725,13.4533031134065,11.1455258216428,15.7832807941623,13.5560301377574,15.7967059778036,9.74287837166718,0.23467170806371,0,2.20528398054962,0.16488625294148,0,1.08563264870681,0.238744688006273,0.164140899745061,1.7488850197791,107.732100468106,0.170870880797853,5.15967169908056,1.11116716421827,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,6.32671987162271,5.08298667817122,4.53622431451565,3.76358932826044,3.27543845619266,2.56242258131159,1.65306911450672,1.04702376793612,1.03691978633434,1.86401793926078,0,5.23307911153926,3.97100377097034,4.86127970860119,4.77891346867605,5.57555214119568,1.87771581833206,2.47388331203505,0.734015410979976,0.241584120826006,0,0,4.25722952109345,4.62199307241723,1.94881234466693,1.9692936523423,1.19208812868759,0.360586348559907,0.295379054349154,0.403865799792591,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,1.9318959403219,3.00291960721891,7.3260649706906,2.78678892802786,0,181.285341480078,198.8605021711,219.991877160728,329.614403735193,339.800929806239,367.121434131394,290.259675099676,378.720131911569,384.71790522759,307.549625180581,5.81209146471389,11.5717213286299,5.63420898988643,6.07766792670735,5.8691685535835,4.41224420280034,6.22290837844523,6.18105171716683,7.70206103020357,4.54854981174835,4.56262739802432,5.65879024158229,4.49479235855436,6.08238947846258,4.47996657853783,7.1444053692461,4.51948871184936,4.82273051159263,2.88460130562315,5.5935589651071,4.80016953339582,5.14679837862079,6.91464950847231,5.0871245821315,5.45834406408918,3.9768865709088,4.93905526756486,6.05060336307039,6.3827933507555,6.17256498823512,3.6776855618494,3.25064791839359,4.50154147486658,5.88759996506671,5.40138510747196,6.245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|short_description=p1@Scn2b
|short_description=p1@Scn2b
}}
}}

Latest revision as of 17:31, 26 September 2015

Short description:p1@Scn2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scn2b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000170998, NM_001014761, uc009pfg.1_5end
EntrezGene:Scn2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scn2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A355.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D562.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3350.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3360.08
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7377.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4290.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5232.98
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6227.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.15
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2337.28
cerebellum, neonate N30.CNhs11135.1395-42I2222.85
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4221.24
corpus striatum, adult.CNhs10487.19-21D8206.33
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D5263.69
cortex, neonate N30.CNhs11107.1392-42F2186.67
diencephalon, adult.CNhs10482.20-12F2277.19
diencephalon, neonate N30.CNhs11201.1388-42B2226.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E210.56
forelimb, embryo E12.CNhs10600.359-14H29.64
forelimb, embryo E13.CNhs10589.384-1E212.49
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8231.53
hippocampus, neonate N00.CNhs11228.627-43G17.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D85.41
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C2162.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3156.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I990.61
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H79.97
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C713.45
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F613.56
pituitary gland, embryo E17.CNhs11039.1265-44F515.80
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C9107.73
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1181.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2198.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3219.99
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7329.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4339.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5367.12
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6290.26
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7378.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8384.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9307.55
whole body, embryo E11.CNhs11014.324-5I85.81
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.71e-1223
neuroblast (sensu Vertebrata)3.71e-1223
neuron2.71e-0833
neuronal stem cell2.71e-0833
neuroblast2.71e-0833
electrically signaling cell2.71e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.53e-2854
neurectoderm1.95e-2664
neural plate1.95e-2664
presumptive neural plate1.95e-2664
neural tube2.75e-2652
neural rod2.75e-2652
future spinal cord2.75e-2652
neural keel2.75e-2652
central nervous system4.03e-2573
nervous system2.03e-2475
brain3.32e-2347
future brain3.32e-2347
regional part of brain1.43e-2246
pre-chordal neural plate4.50e-2249
anterior neural tube4.76e-2140
ecto-epithelium5.18e-2173
regional part of forebrain2.27e-2039
forebrain2.27e-2039
future forebrain2.27e-2039
ectoderm-derived structure4.21e-2095
ectoderm4.21e-2095
presumptive ectoderm4.21e-2095
structure with developmental contribution from neural crest1.03e-1892
gray matter8.92e-1834
brain grey matter5.99e-1529
regional part of telencephalon5.99e-1529
telencephalon5.99e-1529
cerebral cortex1.95e-1021
cerebral hemisphere1.95e-1021
pallium1.95e-1021
regional part of cerebral cortex1.87e-0917
occipital lobe3.07e-0810
visual cortex3.07e-0810
neocortex3.07e-0810
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