FFCP PHASE1:Mm9::chr15:36723350..36723392,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:36723350..36723392,-
|short_description=p1@Ywhaz
|description=CAGE_peak_1_at_Ywhaz_5end
|association_with_transcript=-76bp_to_ENSMUST00000154879_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22631 | |EntrezGene=22631 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=663 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENSMUST00000154879_5end | |||
|cluster_id=chr15:36723350..36723392,- | |||
|description=CAGE_peak_1_at_Ywhaz_5end | |||
|id=chr15:36723350..36723392,- | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-10!23;CL:0000337!1.62e-10!23;CL:0000540!4.65e-08!33;CL:0000047!4.65e-08!33;CL:0000031!4.65e-08!33;CL:0000404!4.65e-08!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-10,23;CL:0000337,1.62e-10,23;CL:0000540,4.65e-08,33;CL:0000047,4.65e-08,33;CL:0000031,4.65e-08,33;CL:0000404,4.65e-08,33;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.08e-18!75;UBERON:0001016!8.08e-18!75;UBERON:0001049!9.61e-18!52;UBERON:0005068!9.61e-18!52;UBERON:0006241!9.61e-18!52;UBERON:0007135!9.61e-18!52;UBERON:0001017!5.69e-17!73;UBERON:0005743!5.69e-17!73;UBERON:0004121!8.74e-17!102;UBERON:0000924!8.74e-17!102;UBERON:0006601!8.74e-17!102;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0002616!3.83e-16!49;UBERON:0002020!1.25e-15!34;UBERON:0003080!4.17e-15!40;UBERON:0000033!4.97e-15!63;UBERON:0002780!1.63e-14!39;UBERON:0001890!1.63e-14!39;UBERON:0006240!1.63e-14!39;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000153!5.52e-14!94;UBERON:0003056!2.31e-13!49;UBERON:0002791!5.39e-13!29;UBERON:0003528!5.39e-13!29;UBERON:0001893!5.39e-13!29;UBERON:0007811!4.72e-12!86;UBERON:0000956!4.97e-09!21;UBERON:0001869!4.97e-09!21;UBERON:0000203!4.97e-09!21;UBERON:0002619!4.90e-08!17;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.51e-19,54;UBERON:0001016,8.08e-18,75;UBERON:0001049,9.61e-18,52;UBERON:0005068,9.61e-18,52;UBERON:0006241,9.61e-18,52;UBERON:0007135,9.61e-18,52;UBERON:0004121,1.68e-17,95;UBERON:0000924,1.68e-17,95;UBERON:0006601,1.68e-17,95;UBERON:0001017,5.69e-17,73;UBERON:0010371,2.72e-16,73;UBERON:0002020,1.25e-15,34;UBERON:0002346,1.69e-15,64;UBERON:0003075,1.69e-15,64;UBERON:0007284,1.69e-15,64;UBERON:0003080,4.17e-15,40;UBERON:0000955,4.30e-15,47;UBERON:0006238,4.30e-15,47;UBERON:0002616,1.45e-14,46;UBERON:0002780,1.63e-14,39;UBERON:0001890,1.63e-14,39;UBERON:0006240,1.63e-14,39;UBERON:0003056,2.31e-13,49;UBERON:0003528,5.39e-13,29;UBERON:0002791,5.39e-13,29;UBERON:0001893,5.39e-13,29;UBERON:0000956,4.97e-09,21;UBERON:0001869,4.97e-09,21;UBERON:0000203,4.97e-09,21;UBERON:0002619,4.90e-08,17;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0010314,1.89e-07,92 | |||
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| ||
|short_description=p1@Ywhaz | |||
}} | }} |
Latest revision as of 18:19, 26 September 2015
Short description: | p1@Ywhaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ywhaz_5end |
Coexpression cluster: | MCL_coexpression_mm9:663 |
Association with transcript: | -76bp_to_ENSMUST00000154879_5end |
EntrezGene: | Ywhaz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-10 | 23 |
neuron | 4.65e-08 | 33 |
neuronal stem cell | 4.65e-08 | 33 |
neuroblast | 4.65e-08 | 33 |
electrically signaling cell | 4.65e-08 | 33 |
electrically responsive cell | 1.31e-07 | 39 |
electrically active cell | 1.31e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.51e-19 | 54 |
nervous system | 8.08e-18 | 75 |
neural tube | 9.61e-18 | 52 |
neural rod | 9.61e-18 | 52 |
future spinal cord | 9.61e-18 | 52 |
neural keel | 9.61e-18 | 52 |
ectoderm-derived structure | 1.68e-17 | 95 |
ectoderm | 1.68e-17 | 95 |
presumptive ectoderm | 1.68e-17 | 95 |
central nervous system | 5.69e-17 | 73 |
ecto-epithelium | 2.72e-16 | 73 |
gray matter | 1.25e-15 | 34 |
neurectoderm | 1.69e-15 | 64 |
neural plate | 1.69e-15 | 64 |
presumptive neural plate | 1.69e-15 | 64 |
anterior neural tube | 4.17e-15 | 40 |
brain | 4.30e-15 | 47 |
future brain | 4.30e-15 | 47 |
regional part of brain | 1.45e-14 | 46 |
regional part of forebrain | 1.63e-14 | 39 |
forebrain | 1.63e-14 | 39 |
future forebrain | 1.63e-14 | 39 |
pre-chordal neural plate | 2.31e-13 | 49 |
brain grey matter | 5.39e-13 | 29 |
regional part of telencephalon | 5.39e-13 | 29 |
telencephalon | 5.39e-13 | 29 |
cerebral cortex | 4.97e-09 | 21 |
cerebral hemisphere | 4.97e-09 | 21 |
pallium | 4.97e-09 | 21 |
regional part of cerebral cortex | 4.90e-08 | 17 |
occipital lobe | 4.92e-08 | 10 |
visual cortex | 4.92e-08 | 10 |
neocortex | 4.92e-08 | 10 |
structure with developmental contribution from neural crest | 1.89e-07 | 92 |