FFCP PHASE1:Mm9::chr6:129483226..129483267,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:129483226..129483267,+
|short_description=p1@Gabarapl1
|description=CAGE_peak_1_at_Gabarapl1_5end
|association_with_transcript=8bp_to_ENSMUST00000032264_5e...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57436 | |EntrezGene=57436 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=767 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3R8 | |UniProt=Q8R3R8 | ||
|association_with_transcript=8bp_to_ENSMUST00000032264_5end | |||
|cluster_id=chr6:129483226..129483267,+ | |||
|description=CAGE_peak_1_at_Gabarapl1_5end | |||
|id=chr6:129483226..129483267,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.73e-11!50;CL:0000393!9.44e-09!39;CL:0000211!9.44e-09!39;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0002319!1.63e-08!43;CL:0000540!6.72e-07!33;CL:0000047!6.72e-07!33;CL:0000031!6.72e-07!33;CL:0000404!6.72e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.44e-09,39;CL:0000211,9.44e-09,39;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002319,1.63e-08,43;CL:0000540,6.71e-07,33;CL:0000047,6.71e-07,33;CL:0000031,6.71e-07,33;CL:0000404,6.71e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.14e-19,75;UBERON:0001017,1.67e-19,73;UBERON:0004121,9.20e-18,95;UBERON:0000924,9.20e-18,95;UBERON:0006601,9.20e-18,95;UBERON:0000073,1.35e-16,54;UBERON:0004111,1.38e-16,122;UBERON:0001049,2.30e-15,52;UBERON:0005068,2.30e-15,52;UBERON:0006241,2.30e-15,52;UBERON:0007135,2.30e-15,52;UBERON:0000025,5.09e-15,114;UBERON:0002346,3.22e-14,64;UBERON:0003075,3.22e-14,64;UBERON:0007284,3.22e-14,64;UBERON:0000955,6.39e-14,47;UBERON:0006238,6.39e-14,47;UBERON:0002616,2.09e-13,46;UBERON:0010371,2.98e-12,73;UBERON:0010314,8.14e-12,92;UBERON:0003080,1.23e-11,40;UBERON:0002780,3.66e-11,39;UBERON:0001890,3.66e-11,39;UBERON:0006240,3.66e-11,39;UBERON:0002020,6.10e-11,34;UBERON:0003056,1.66e-10,49;UBERON:0003528,1.20e-09,29;UBERON:0002791,1.20e-09,29;UBERON:0001893,1.20e-09,29;UBERON:0000956,9.21e-07,21;UBERON:0001869,9.21e-07,21;UBERON:0000203,9.21e-07,21 | |||
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| ||
|short_description=p1@Gabarapl1 | |||
}} | }} |
Latest revision as of 19:14, 26 September 2015
Short description: | p1@Gabarapl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabarapl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:767 |
Association with transcript: | 8bp_to_ENSMUST00000032264_5end |
EntrezGene: | Gabarapl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.44e-09 | 39 |
electrically active cell | 9.44e-09 | 39 |
ectodermal cell | 1.26e-08 | 44 |
neurectodermal cell | 1.26e-08 | 44 |
neural cell | 1.63e-08 | 43 |
neuron | 6.71e-07 | 33 |
neuronal stem cell | 6.71e-07 | 33 |
neuroblast | 6.71e-07 | 33 |
electrically signaling cell | 6.71e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.14e-19 | 75 |
central nervous system | 1.67e-19 | 73 |
ectoderm-derived structure | 9.20e-18 | 95 |
ectoderm | 9.20e-18 | 95 |
presumptive ectoderm | 9.20e-18 | 95 |
regional part of nervous system | 1.35e-16 | 54 |
anatomical conduit | 1.38e-16 | 122 |
neural tube | 2.30e-15 | 52 |
neural rod | 2.30e-15 | 52 |
future spinal cord | 2.30e-15 | 52 |
neural keel | 2.30e-15 | 52 |
tube | 5.09e-15 | 114 |
neurectoderm | 3.22e-14 | 64 |
neural plate | 3.22e-14 | 64 |
presumptive neural plate | 3.22e-14 | 64 |
brain | 6.39e-14 | 47 |
future brain | 6.39e-14 | 47 |
regional part of brain | 2.09e-13 | 46 |
ecto-epithelium | 2.98e-12 | 73 |
structure with developmental contribution from neural crest | 8.14e-12 | 92 |
anterior neural tube | 1.23e-11 | 40 |
regional part of forebrain | 3.66e-11 | 39 |
forebrain | 3.66e-11 | 39 |
future forebrain | 3.66e-11 | 39 |
gray matter | 6.10e-11 | 34 |
pre-chordal neural plate | 1.66e-10 | 49 |
brain grey matter | 1.20e-09 | 29 |
regional part of telencephalon | 1.20e-09 | 29 |
telencephalon | 1.20e-09 | 29 |
cerebral cortex | 9.21e-07 | 21 |
cerebral hemisphere | 9.21e-07 | 21 |
pallium | 9.21e-07 | 21 |