FFCP PHASE1:Mm9::chr17:70318727..70318780,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224997 | |EntrezGene=224997 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z709 | |UniProt=D3Z709 | ||
|association_with_transcript=0bp_to_ENSMUST00000130971,ENSMUST00000146730_5end | |association_with_transcript=0bp_to_ENSMUST00000130971,ENSMUST00000146730_5end | ||
|cluster_id=chr17:70318727..70318780,+ | |||
|description=CAGE_peak_1_at_Dlgap1_5end | |description=CAGE_peak_1_at_Dlgap1_5end | ||
|id=chr17:70318727..70318780,+ | |id=chr17:70318727..70318780,+ | ||
|ontology_enrichment_celltype=CL:0000540!8.45e-15!33;CL:0000047!8.45e-15!33;CL:0000031!8.45e-15!33;CL:0000404!8.45e-15!33;CL:0000117!1.40e-11!23;CL:0000337!1.40e-11!23;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0002319!1.24e-10!43;CL:0000393!4.26e-10!39;CL:0000211!4.26e-10!39;CL:0000055!5.39e-07!50 | |ontology_enrichment_celltype=CL:0000540!8.45e-15!33;CL:0000047!8.45e-15!33;CL:0000031!8.45e-15!33;CL:0000404!8.45e-15!33;CL:0000117!1.40e-11!23;CL:0000337!1.40e-11!23;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0002319!1.24e-10!43;CL:0000393!4.26e-10!39;CL:0000211!4.26e-10!39;CL:0000055!5.39e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-17,33;CL:0000047,1.06e-17,33;CL:0000031,1.06e-17,33;CL:0000404,1.06e-17,33;CL:0000117,8.94e-14,23;CL:0000337,8.94e-14,23;CL:0000393,6.65e-13,39;CL:0000211,6.65e-13,39;CL:0000221,9.03e-11,44;CL:0000133,9.03e-11,44;CL:0002319,1.56e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.05e-27,73;UBERON:0001016,1.85e-25,75;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0000073,4.70e-22,54;UBERON:0004121,9.02e-22,95;UBERON:0000924,9.02e-22,95;UBERON:0006601,9.02e-22,95;UBERON:0001049,1.86e-20,52;UBERON:0005068,1.86e-20,52;UBERON:0006241,1.86e-20,52;UBERON:0007135,1.86e-20,52;UBERON:0002020,3.67e-20,34;UBERON:0010371,1.42e-19,73;UBERON:0000955,2.87e-17,47;UBERON:0006238,2.87e-17,47;UBERON:0010314,3.03e-17,92;UBERON:0003528,9.74e-17,29;UBERON:0002791,9.74e-17,29;UBERON:0001893,9.74e-17,29;UBERON:0002616,1.95e-16,46;UBERON:0003056,2.71e-16,49;UBERON:0003080,6.11e-15,40;UBERON:0002780,3.01e-14,39;UBERON:0001890,3.01e-14,39;UBERON:0006240,3.01e-14,39;UBERON:0000956,1.09e-11,21;UBERON:0001869,1.09e-11,21;UBERON:0000203,1.09e-11,21;UBERON:0002619,3.86e-10,17;UBERON:0002021,1.48e-09,10;UBERON:0000411,1.48e-09,10;UBERON:0001950,1.48e-09,10 | |||
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| ||
|short_description=p1@Dlgap1 | |short_description=p1@Dlgap1 | ||
}} | }} |
Latest revision as of 19:55, 26 September 2015
Short description: | p1@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000130971, ENSMUST00000146730_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.06e-17 | 33 |
neuronal stem cell | 1.06e-17 | 33 |
neuroblast | 1.06e-17 | 33 |
electrically signaling cell | 1.06e-17 | 33 |
CNS neuron (sensu Vertebrata) | 8.94e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.94e-14 | 23 |
electrically responsive cell | 6.65e-13 | 39 |
electrically active cell | 6.65e-13 | 39 |
ectodermal cell | 9.03e-11 | 44 |
neurectodermal cell | 9.03e-11 | 44 |
neural cell | 1.56e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.05e-27 | 73 |
nervous system | 1.85e-25 | 75 |
neurectoderm | 1.26e-23 | 64 |
neural plate | 1.26e-23 | 64 |
presumptive neural plate | 1.26e-23 | 64 |
regional part of nervous system | 4.70e-22 | 54 |
ectoderm-derived structure | 9.02e-22 | 95 |
ectoderm | 9.02e-22 | 95 |
presumptive ectoderm | 9.02e-22 | 95 |
neural tube | 1.86e-20 | 52 |
neural rod | 1.86e-20 | 52 |
future spinal cord | 1.86e-20 | 52 |
neural keel | 1.86e-20 | 52 |
gray matter | 3.67e-20 | 34 |
ecto-epithelium | 1.42e-19 | 73 |
brain | 2.87e-17 | 47 |
future brain | 2.87e-17 | 47 |
structure with developmental contribution from neural crest | 3.03e-17 | 92 |
brain grey matter | 9.74e-17 | 29 |
regional part of telencephalon | 9.74e-17 | 29 |
telencephalon | 9.74e-17 | 29 |
regional part of brain | 1.95e-16 | 46 |
pre-chordal neural plate | 2.71e-16 | 49 |
anterior neural tube | 6.11e-15 | 40 |
regional part of forebrain | 3.01e-14 | 39 |
forebrain | 3.01e-14 | 39 |
future forebrain | 3.01e-14 | 39 |
cerebral cortex | 1.09e-11 | 21 |
cerebral hemisphere | 1.09e-11 | 21 |
pallium | 1.09e-11 | 21 |
regional part of cerebral cortex | 3.86e-10 | 17 |
occipital lobe | 1.48e-09 | 10 |
visual cortex | 1.48e-09 | 10 |
neocortex | 1.48e-09 | 10 |